RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 SLC11A2P49281 568 aa9.13□□□□□ -0.95
SNRPA1-206ENST00000558059 ZNF445P59923 1031 aa9.13□□□□□ -0.95
SNRPA1-206ENST00000558059 YWHAZP63104 245 aaKnown RBP9.13□□□□□ -0.95
SNRPA1-206ENST00000558059 PITX1P78337 314 aaPredicted RBP9.13□□□□□ -0.95
SNRPA1-206ENST00000558059 ARHGAP8P85298 464 aa9.13□□□□□ -0.95
SNRPA1-206ENST00000558059 LMNB2Q03252 620 aa9.13□□□□□ -0.95
SNRPA1-206ENST00000558059 EIF4EBP2Q13542 120 aaPredicted RBP9.13□□□□□ -0.95
SNRPA1-206ENST00000558059 ENPP2Q13822 863 aa9.13□□□□□ -0.95
SNRPA1-206ENST00000558059 KRT31Q15323 416 aa9.13□□□□□ -0.95
SNRPA1-206ENST00000558059 CCDC6Q16204 474 aa9.13□□□□□ -0.95
SNRPA1-206ENST00000558059 PIK3R6Q5UE93 754 aa9.13□□□□□ -0.95
SNRPA1-206ENST00000558059 NUGGCQ68CJ6 796 aa9.13□□□□□ -0.95
SNRPA1-206ENST00000558059 PMS2CLQ68D20 193 aa9.13□□□□□ -0.95
SNRPA1-206ENST00000558059 NADSYN1Q6IA69 706 aa9.13□□□□□ -0.95
SNRPA1-206ENST00000558059 SDE2Q6IQ49 451 aa9.13□□□□□ -0.95
SNRPA1-206ENST00000558059 KIAA1211LQ6NV74 962 aa9.13□□□□□ -0.95
SNRPA1-206ENST00000558059 RFWD3Q6PCD5 774 aa9.13□□□□□ -0.95
SNRPA1-206ENST00000558059 PRR23CQ6ZRP0 262 aa9.13□□□□□ -0.95
SNRPA1-206ENST00000558059 ANKS1BQ7Z6G8 1248 aa9.13□□□□□ -0.95
SNRPA1-206ENST00000558059 KIAA0907Q7Z7F0 614 aaPredicted RBP9.13□□□□□ -0.95
SNRPA1-206ENST00000558059 TAC4Q86UU9 113 aa9.13□□□□□ -0.95
SNRPA1-206ENST00000558059 FRMD1Q8N878 549 aa9.13□□□□□ -0.95
SNRPA1-206ENST00000558059 ADAM32Q8TC27 787 aa9.13□□□□□ -0.95
SNRPA1-206ENST00000558059 MYEOVQ96EZ4 313 aa9.13□□□□□ -0.95
SNRPA1-206ENST00000558059 PPP1R13BQ96KQ4 1090 aa9.13□□□□□ -0.95
SNRPA1-206ENST00000558059 LSM14BQ9BX40 385 aaKnown RBP9.13□□□□□ -0.95
SNRPA1-206ENST00000558059 IRX2Q9BZI1 471 aaPredicted RBP9.13□□□□□ -0.95
SNRPA1-206ENST00000558059 VPS16Q9H269 839 aa9.13□□□□□ -0.95
SNRPA1-206ENST00000558059 POPDC2Q9HBU9 364 aa9.13□□□□□ -0.95
SNRPA1-206ENST00000558059 PLCB1Q9NQ66 1216 aa9.13□□□□□ -0.95
SNRPA1-206ENST00000558059 ANO10Q9NW15 660 aa9.13□□□□□ -0.95
SNRPA1-206ENST00000558059 FANCLQ9NW38 375 aa9.13□□□□□ -0.95
SNRPA1-206ENST00000558059 ELOVL2Q9NXB9 296 aa9.13□□□□□ -0.95
SNRPA1-206ENST00000558059 CACNA2D2Q9NY47 1150 aa9.13□□□□□ -0.95
SNRPA1-206ENST00000558059 MBD1Q9UIS9 605 aaPredicted RBP9.13□□□□□ -0.95
SNRPA1-206ENST00000558059 TLR6Q9Y2C9 796 aa9.13□□□□□ -0.95
SNRPA1-206ENST00000558059 PCDHGA5Q9Y5G8 931 aa9.13□□□□□ -0.95
SNRPA1-206ENST00000558059 RAD54BQ9Y620 910 aa9.13□□□□□ -0.95
SNRPA1-206ENST00000558059 STON1Q9Y6Q2 735 aa9.13□□□□□ -0.95
SNRPA1-206ENST00000558059 TPRP12270 2363 aaKnown RBP9.12□□□□□ -0.95
SNRPA1-206ENST00000558059 BCLAF3A2AJT9 711 aaKnown RBP9.12□□□□□ -0.95
SNRPA1-206ENST00000558059 PES1O00541 588 aaKnown RBP9.12□□□□□ -0.95
SNRPA1-206ENST00000558059 CAPN9O14815 690 aa9.12□□□□□ -0.95
SNRPA1-206ENST00000558059 NPC1O15118 1278 aa9.12□□□□□ -0.95
SNRPA1-206ENST00000558059 IRAK2O43187 625 aa9.12□□□□□ -0.95
SNRPA1-206ENST00000558059 TIMM44O43615 452 aa9.12□□□□□ -0.95
SNRPA1-206ENST00000558059 TRUB2O95900 331 aaKnown RBP9.12□□□□□ -0.95
SNRPA1-206ENST00000558059 MBD3O95983 291 aa9.12□□□□□ -0.95
SNRPA1-206ENST00000558059 ERBB2P04626 1255 aa9.12□□□□□ -0.95
SNRPA1-206ENST00000558059 GLI1P08151 1106 aa9.12□□□□□ -0.95
SNRPA1-206ENST00000558059 UCHL3P15374 230 aa9.12□□□□□ -0.95
SNRPA1-206ENST00000558059 CYP11B1P15538 503 aa9.12□□□□□ -0.95
SNRPA1-206ENST00000558059 HLA-FP30511 346 aa9.12□□□□□ -0.95
SNRPA1-206ENST00000558059 GBP1P32455 592 aa9.12□□□□□ -0.95
SNRPA1-206ENST00000558059 KRT9P35527 623 aa9.12□□□□□ -0.95
SNRPA1-206ENST00000558059 MPLP40238 635 aa9.12□□□□□ -0.95
SNRPA1-206ENST00000558059 IL12RB1P42701 662 aa9.12□□□□□ -0.95
SNRPA1-206ENST00000558059 KLK7P49862 253 aa9.12□□□□□ -0.95
SNRPA1-206ENST00000558059 ATXN1P54253 815 aaKnown RBP9.12□□□□□ -0.95
SNRPA1-206ENST00000558059 BPIFB4P59827 614 aa9.12□□□□□ -0.95
SNRPA1-206ENST00000558059 RAPGEF1Q13905 1077 aa9.12□□□□□ -0.95
SNRPA1-206ENST00000558059 PUM1Q14671 1186 aaKnown RBP eCLIP9.12□□□□□ -0.95
SNRPA1-206ENST00000558059 SF3A2Q15428 464 aaKnown RBP9.12□□□□□ -0.95
SNRPA1-206ENST00000558059 ELF2Q15723 593 aa9.12□□□□□ -0.95
SNRPA1-206ENST00000558059 PTPN20Q4JDL3 420 aa9.12□□□□□ -0.95
SNRPA1-206ENST00000558059 ZC3H12AQ5D1E8 599 aaKnown RBP9.12□□□□□ -0.95
SNRPA1-206ENST00000558059 MPP7Q5T2T1 576 aa9.12□□□□□ -0.95
SNRPA1-206ENST00000558059 CCDC183Q5T5S1 534 aa9.12□□□□□ -0.95
SNRPA1-206ENST00000558059 SASS6Q6UVJ0 657 aa9.12□□□□□ -0.95
SNRPA1-206ENST00000558059 FAM183BPQ6ZVS7 135 aa9.12□□□□□ -0.95
SNRPA1-206ENST00000558059 C11orf74Q86VG3 221 aa9.12□□□□□ -0.95
SNRPA1-206ENST00000558059 PGBD3Q8N328 593 aa9.12□□□□□ -0.95
SNRPA1-206ENST00000558059 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.12□□□□□ -0.95
SNRPA1-206ENST00000558059 C1orf131Q8NDD1 294 aaKnown RBP9.12□□□□□ -0.95
SNRPA1-206ENST00000558059 WFDC5Q8TCV5 224 aa9.12□□□□□ -0.95
SNRPA1-206ENST00000558059 UCMAQ8WVF2 138 aa9.12□□□□□ -0.95
SNRPA1-206ENST00000558059 SORCS1Q8WY21 1168 aa9.12□□□□□ -0.95
SNRPA1-206ENST00000558059 DDX1Q92499 740 aaKnown RBP9.12□□□□□ -0.95
SNRPA1-206ENST00000558059 ERLEC1Q96DZ1 483 aa9.12□□□□□ -0.95
SNRPA1-206ENST00000558059 LMLNQ96KR4 655 aa9.12□□□□□ -0.95
SNRPA1-206ENST00000558059 SERPINB11Q96P15 392 aa9.12□□□□□ -0.95
SNRPA1-206ENST00000558059 SLC2A13Q96QE2 648 aa9.12□□□□□ -0.95
SNRPA1-206ENST00000558059 TRIM62Q9BVG3 475 aa9.12□□□□□ -0.95
SNRPA1-206ENST00000558059 STK33Q9BYT3 514 aa9.12□□□□□ -0.95
SNRPA1-206ENST00000558059 GANQ9H2C0 597 aa9.12□□□□□ -0.95
SNRPA1-206ENST00000558059 SMOC1Q9H4F8 434 aa9.12□□□□□ -0.95
SNRPA1-206ENST00000558059 ASNSD1Q9NWL6 643 aa9.12□□□□□ -0.95
SNRPA1-206ENST00000558059 BCCIPQ9P287 314 aaKnown RBP eCLIP9.12□□□□□ -0.95
SNRPA1-206ENST00000558059 XPO7Q9UIA9 1087 aaKnown RBP9.12□□□□□ -0.95
SNRPA1-206ENST00000558059 CABIN1Q9Y6J0 2220 aa9.11□□□□□ -0.95
SNRPA1-206ENST00000558059 LRRC10BA6NIK2 292 aa9.11□□□□□ -0.95
SNRPA1-206ENST00000558059 BHMG1C9JSJ3 638 aaPredicted RBP9.11□□□□□ -0.95
SNRPA1-206ENST00000558059 GDF9O60383 454 aa9.11□□□□□ -0.95
SNRPA1-206ENST00000558059 TBL1XO60907 577 aa9.11□□□□□ -0.95
SNRPA1-206ENST00000558059 GRAP2O75791 330 aa9.11□□□□□ -0.95
SNRPA1-206ENST00000558059 ZNF18P17022 549 aa9.11□□□□□ -0.95
SNRPA1-206ENST00000558059 NDUFV2P19404 249 aa9.11□□□□□ -0.95
SNRPA1-206ENST00000558059 CDH5P33151 784 aaPredicted RBP9.11□□□□□ -0.95
SNRPA1-206ENST00000558059 COPB1P53618 953 aaKnown RBP9.11□□□□□ -0.95
SNRPA1-206ENST00000558059 RPS24P62847 133 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms