RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 MSANTD3Q96H12 275 aa14.66□□□□□ -0.06
SNX6-206ENST00000556162 SHDQ96IW2 340 aa14.66□□□□□ -0.06
SNX6-206ENST00000556162 HAPLN3Q96S86 360 aa14.66□□□□□ -0.06
SNX6-206ENST00000556162 DESI2Q9BSY9 194 aa14.66□□□□□ -0.06
SNX6-206ENST00000556162 BBS2Q9BXC9 721 aa14.66□□□□□ -0.06
SNX6-206ENST00000556162 IRX2Q9BZI1 471 aaPredicted RBP14.66□□□□□ -0.06
SNX6-206ENST00000556162 SIK2Q9H0K1 926 aa14.66□□□□□ -0.06
SNX6-206ENST00000556162 REXO2Q9Y3B8 237 aaKnown RBP14.66□□□□□ -0.06
SNX6-206ENST00000556162 NEDD8-MDP1E9PL57 170 aa14.65□□□□□ -0.06
SNX6-206ENST00000556162 SPECC1L-ADORA2AF8WAN1 911 aa14.65□□□□□ -0.06
SNX6-206ENST00000556162 PI4K2BG5E9Z4 385 aa14.65□□□□□ -0.06
SNX6-206ENST00000556162 TACR2P21452 398 aa14.65□□□□□ -0.06
SNX6-206ENST00000556162 SLC6A4P31645 630 aa14.65□□□□□ -0.06
SNX6-206ENST00000556162 NOP2P46087 812 aaKnown RBP14.65□□□□□ -0.06
SNX6-206ENST00000556162 SOX9P48436 509 aa14.65□□□□□ -0.06
SNX6-206ENST00000556162 VAV2P52735 878 aa14.65□□□□□ -0.06
SNX6-206ENST00000556162 TCEAL1Q15170 157 aa14.65□□□□□ -0.06
SNX6-206ENST00000556162 MS4A13Q5J8X5 152 aa14.65□□□□□ -0.06
SNX6-206ENST00000556162 RAP1GAP2Q684P5 730 aa14.65□□□□□ -0.06
SNX6-206ENST00000556162 RFWD3Q6PCD5 774 aa14.65□□□□□ -0.06
SNX6-206ENST00000556162 C1orf228Q6PIY5 440 aa14.65□□□□□ -0.06
SNX6-206ENST00000556162 SLFN11Q7Z7L1 901 aa14.65□□□□□ -0.06
SNX6-206ENST00000556162 CHSY1Q86X52 802 aa14.65□□□□□ -0.06
SNX6-206ENST00000556162 SIX5Q8N196 739 aa14.65□□□□□ -0.06
SNX6-206ENST00000556162 BHMTQ93088 406 aa14.65□□□□□ -0.06
SNX6-206ENST00000556162 C1orf74Q96LT6 269 aa14.65□□□□□ -0.06
SNX6-206ENST00000556162 ANLNQ9NQW6 1124 aa14.65□□□□□ -0.06
SNX6-206ENST00000556162 MARK1Q9P0L2 795 aa14.65□□□□□ -0.06
SNX6-206ENST00000556162 TFR2Q9UP52 801 aa14.65□□□□□ -0.06
SNX6-206ENST00000556162 HS3ST4Q9Y661 456 aa14.65□□□□□ -0.06
SNX6-206ENST00000556162 TYW5A2RUC4 315 aaKnown RBP14.65□□□□□ -0.06
SNX6-206ENST00000556162 F5H5T6 163 aa14.65□□□□□ -0.06
SNX6-206ENST00000556162 MAN2B1O00754 1011 aa14.65□□□□□ -0.06
SNX6-206ENST00000556162 HOXC11O43248 304 aaPredicted RBP14.65□□□□□ -0.06
SNX6-206ENST00000556162 PRPSAP2O60256 369 aa14.65□□□□□ -0.06
SNX6-206ENST00000556162 MTA2O94776 668 aa14.65□□□□□ -0.06
SNX6-206ENST00000556162 TYRP14679 529 aa14.65□□□□□ -0.06
SNX6-206ENST00000556162 PCK1P35558 622 aa14.65□□□□□ -0.06
SNX6-206ENST00000556162 ARHGAP25P42331 645 aa14.65□□□□□ -0.06
SNX6-206ENST00000556162 AIF1P55008 147 aa14.65□□□□□ -0.06
SNX6-206ENST00000556162 CCZ1BP86790 482 aa14.65□□□□□ -0.06
SNX6-206ENST00000556162 CCZ1P86791 482 aaPredicted RBP14.65□□□□□ -0.06
SNX6-206ENST00000556162 CCDC173Q0VFZ6 552 aa14.65□□□□□ -0.06
SNX6-206ENST00000556162 PIK3R6Q5UE93 754 aa14.65□□□□□ -0.06
SNX6-206ENST00000556162 TRIM67Q6ZTA4 783 aa14.65□□□□□ -0.06
SNX6-206ENST00000556162 TPRG1Q6ZUI0 275 aa14.65□□□□□ -0.06
SNX6-206ENST00000556162 NIPA2Q8N8Q9 360 aa14.65□□□□□ -0.06
SNX6-206ENST00000556162 EXOC4Q96A65 974 aa14.65□□□□□ -0.06
SNX6-206ENST00000556162 NTAN1Q96AB6 310 aa14.65□□□□□ -0.06
SNX6-206ENST00000556162 XPO6Q96QU8 1125 aaKnown RBP14.65□□□□□ -0.06
SNX6-206ENST00000556162 TMPRSS4Q9NRS4 437 aa14.65□□□□□ -0.06
SNX6-206ENST00000556162 PLK2Q9NYY3 685 aa14.65□□□□□ -0.06
SNX6-206ENST00000556162 PCSK1NQ9UHG2 260 aa14.65□□□□□ -0.06
SNX6-206ENST00000556162 A0A0A6YYK5 440 aaPredicted RBP14.64□□□□□ -0.07
SNX6-206ENST00000556162 KRBA1A5PL33 1030 aa14.64□□□□□ -0.07
SNX6-206ENST00000556162 RCCD1A6NED2 376 aa14.64□□□□□ -0.07
SNX6-206ENST00000556162 I6L893 689 aaPredicted RBP14.64□□□□□ -0.07
SNX6-206ENST00000556162 GFRA2O00451 464 aa14.64□□□□□ -0.07
SNX6-206ENST00000556162 LRCH4O75427 683 aa14.64□□□□□ -0.07
SNX6-206ENST00000556162 PROSCO94903 275 aa14.64□□□□□ -0.07
SNX6-206ENST00000556162 MIPP30301 263 aa14.64□□□□□ -0.07
SNX6-206ENST00000556162 CTHP32929 405 aa14.64□□□□□ -0.07
SNX6-206ENST00000556162 KIF5AQ12840 1032 aa14.64□□□□□ -0.07
SNX6-206ENST00000556162 AUHQ13825 339 aaKnown RBP14.64□□□□□ -0.07
SNX6-206ENST00000556162 MESDQ14696 234 aa14.64□□□□□ -0.07
SNX6-206ENST00000556162 FYB2Q5VWT5 728 aa14.64□□□□□ -0.07
SNX6-206ENST00000556162 LRRC31Q6UY01 552 aa14.64□□□□□ -0.07
SNX6-206ENST00000556162 ZNF852Q6ZMS4 543 aa14.64□□□□□ -0.07
SNX6-206ENST00000556162 LGI2Q8N0V4 545 aa14.64□□□□□ -0.07
SNX6-206ENST00000556162 ARFGAP1Q8N6T3 406 aa14.64□□□□□ -0.07
SNX6-206ENST00000556162 CCDC185Q8N715 623 aa14.64□□□□□ -0.07
SNX6-206ENST00000556162 NAT16Q8N8M0 369 aa14.64□□□□□ -0.07
SNX6-206ENST00000556162 PRMT1Q99873 361 aaKnown RBP14.64□□□□□ -0.07
SNX6-206ENST00000556162 ADGRG1Q9Y653 693 aa14.64□□□□□ -0.07
SNX6-206ENST00000556162 KIF26AQ9ULI4 1882 aaPredicted RBP14.64□□□□□ -0.07
SNX6-206ENST00000556162 STK25O00506 426 aa14.63□□□□□ -0.07
SNX6-206ENST00000556162 PJA2O43164 708 aa14.63□□□□□ -0.07
SNX6-206ENST00000556162 PENKP01210 267 aaPredicted RBP14.63□□□□□ -0.07
SNX6-206ENST00000556162 STARD6P59095 220 aa14.63□□□□□ -0.07
SNX6-206ENST00000556162 EFHC2Q5JST6 749 aa14.63□□□□□ -0.07
SNX6-206ENST00000556162 RABGAP1LQ5R372 815 aa14.63□□□□□ -0.07
SNX6-206ENST00000556162 MPP7Q5T2T1 576 aa14.63□□□□□ -0.07
SNX6-206ENST00000556162 HJURPQ8NCD3 748 aaPredicted RBP14.63□□□□□ -0.07
SNX6-206ENST00000556162 FAM3CQ92520 227 aa14.63□□□□□ -0.07
SNX6-206ENST00000556162 RPRD1AQ96P16 312 aaPredicted RBP14.63□□□□□ -0.07
SNX6-206ENST00000556162 LACRTQ9GZZ8 138 aa14.63□□□□□ -0.07
SNX6-206ENST00000556162 OSBPL2Q9H1P3 480 aa14.63□□□□□ -0.07
SNX6-206ENST00000556162 VANGL2Q9ULK5 521 aa14.63□□□□□ -0.07
SNX6-206ENST00000556162 USP18Q9UMW8 372 aa14.63□□□□□ -0.07
SNX6-206ENST00000556162 TMEM110-MUSTN1A8MSY1 372 aa14.63□□□□□ -0.07
SNX6-206ENST00000556162 BTNL10A8MVZ5 291 aa14.63□□□□□ -0.07
SNX6-206ENST00000556162 TBL1XO60907 577 aa14.63□□□□□ -0.07
SNX6-206ENST00000556162 CD72P21854 359 aa14.63□□□□□ -0.07
SNX6-206ENST00000556162 GGCXP38435 758 aa14.63□□□□□ -0.07
SNX6-206ENST00000556162 SSR1P43307 286 aaKnown RBP14.63□□□□□ -0.07
SNX6-206ENST00000556162 HADHBP55084 474 aaKnown RBP14.63□□□□□ -0.07
SNX6-206ENST00000556162 NAP1L1P55209 391 aaKnown RBP14.63□□□□□ -0.07
SNX6-206ENST00000556162 SCAPQ12770 1279 aa14.63□□□□□ -0.07
SNX6-206ENST00000556162 HADHQ16836 314 aaKnown RBP14.63□□□□□ -0.07
SNX6-206ENST00000556162 ERMARDQ5T6L9 678 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms