RNA–Protein interactions for RNA: ENST00000554739.5

MTHFD1-208, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-208ENST00000554739 NELL1Q92832 810 aa13.4□□□□□ -0.26
MTHFD1-208ENST00000554739 ATOH1Q92858 354 aaPredicted RBP13.4□□□□□ -0.26
MTHFD1-208ENST00000554739 MYEOVQ96EZ4 313 aa13.4□□□□□ -0.26
MTHFD1-208ENST00000554739 BTN2A3PQ96KV6 586 aa13.4□□□□□ -0.26
MTHFD1-208ENST00000554739 TBCBQ99426 244 aa13.4□□□□□ -0.26
MTHFD1-208ENST00000554739 DDX50Q9BQ39 737 aaKnown RBP13.4□□□□□ -0.26
MTHFD1-208ENST00000554739 SLC2A11Q9BYW1 496 aa13.4□□□□□ -0.26
MTHFD1-208ENST00000554739 PIGVQ9NUD9 493 aa13.4□□□□□ -0.26
MTHFD1-208ENST00000554739 POLR3BQ9NW08 1133 aaPredicted RBP13.4□□□□□ -0.26
MTHFD1-208ENST00000554739 COX16Q9P0S2 106 aa13.4□□□□□ -0.26
MTHFD1-208ENST00000554739 HCN2Q9UL51 889 aa13.4□□□□□ -0.26
MTHFD1-208ENST00000554739 STAP1Q9ULZ2 295 aa13.4□□□□□ -0.26
MTHFD1-208ENST00000554739 SLC27A6Q9Y2P4 619 aa13.4□□□□□ -0.26
MTHFD1-208ENST00000554739 STARD13Q9Y3M8 1113 aa13.4□□□□□ -0.26
MTHFD1-208ENST00000554739 BZW2Q9Y6E2 419 aaKnown RBP13.4□□□□□ -0.26
MTHFD1-208ENST00000554739 TCRBV5S1A1TA0A578 114 aa13.39□□□□□ -0.27
MTHFD1-208ENST00000554739 C2CD4BA6NLJ0 364 aa13.39□□□□□ -0.27
MTHFD1-208ENST00000554739 SIGLEC16A6NMB1 481 aa13.39□□□□□ -0.27
MTHFD1-208ENST00000554739 PRRT4C9JH25 899 aa13.39□□□□□ -0.27
MTHFD1-208ENST00000554739 K7ESF4 209 aa13.39□□□□□ -0.27
MTHFD1-208ENST00000554739 GJB6O95452 261 aa13.39□□□□□ -0.27
MTHFD1-208ENST00000554739 SERPING1P05155 500 aa13.39□□□□□ -0.27
MTHFD1-208ENST00000554739 KRT3P12035 628 aa13.39□□□□□ -0.27
MTHFD1-208ENST00000554739 GZMAP12544 262 aa13.39□□□□□ -0.27
MTHFD1-208ENST00000554739 ABCB4P21439 1286 aa13.39□□□□□ -0.27
MTHFD1-208ENST00000554739 HOXC13P31276 330 aa13.39□□□□□ -0.27
MTHFD1-208ENST00000554739 HNRNPH3P31942 346 aaKnown RBP13.39□□□□□ -0.27
MTHFD1-208ENST00000554739 RFC1P35251 1148 aaPredicted RBP13.39□□□□□ -0.27
MTHFD1-208ENST00000554739 SULT1E1P49888 294 aa13.39□□□□□ -0.27
MTHFD1-208ENST00000554739 SEC13P55735 322 aa13.39□□□□□ -0.27
MTHFD1-208ENST00000554739 MRPS21P82921 87 aaKnown RBP13.39□□□□□ -0.27
MTHFD1-208ENST00000554739 NHLH1Q02575 133 aa13.39□□□□□ -0.27
MTHFD1-208ENST00000554739 CCDC14Q49A88 953 aa13.39□□□□□ -0.27
MTHFD1-208ENST00000554739 MS4A13Q5J8X5 152 aa13.39□□□□□ -0.27
MTHFD1-208ENST00000554739 C10orf76Q5T2E6 689 aa13.39□□□□□ -0.27
MTHFD1-208ENST00000554739 PPP1R2P3Q6NXS1 205 aa13.39□□□□□ -0.27
MTHFD1-208ENST00000554739 NUDT18Q6ZVK8 323 aa13.39□□□□□ -0.27
MTHFD1-208ENST00000554739 SYT13Q7L8C5 426 aa13.39□□□□□ -0.27
MTHFD1-208ENST00000554739 MCOLN2Q8IZK6 566 aa13.39□□□□□ -0.27
MTHFD1-208ENST00000554739 ATP6V0D2Q8N8Y2 350 aa13.39□□□□□ -0.27
MTHFD1-208ENST00000554739 C3orf20Q8ND61 904 aa13.39□□□□□ -0.27
MTHFD1-208ENST00000554739 JOSD2Q8TAC2 188 aa13.39□□□□□ -0.27
MTHFD1-208ENST00000554739 KCNV2Q8TDN2 545 aa13.39□□□□□ -0.27
MTHFD1-208ENST00000554739 RXFP2Q8WXD0 754 aa13.39□□□□□ -0.27
MTHFD1-208ENST00000554739 RNF34Q969K3 372 aa13.39□□□□□ -0.27
MTHFD1-208ENST00000554739 VCPIP1Q96JH7 1222 aa13.39□□□□□ -0.27
MTHFD1-208ENST00000554739 PRMT1Q99873 361 aaKnown RBP13.39□□□□□ -0.27
MTHFD1-208ENST00000554739 METTL5Q9NRN9 209 aaKnown RBP13.39□□□□□ -0.27
MTHFD1-208ENST00000554739 TMEM51Q9NW97 253 aa13.39□□□□□ -0.27
MTHFD1-208ENST00000554739 SLC12A6Q9UHW9 1150 aa13.39□□□□□ -0.27
MTHFD1-208ENST00000554739 CACNA1IQ9P0X4 2223 aa13.39□□□□□ -0.27
MTHFD1-208ENST00000554739 TMCO5BA8MYB1 307 aa13.38□□□□□ -0.27
MTHFD1-208ENST00000554739 I6L893 689 aaPredicted RBP13.38□□□□□ -0.27
MTHFD1-208ENST00000554739 TBL1XO60907 577 aa13.38□□□□□ -0.27
MTHFD1-208ENST00000554739 PAGE1O75459 146 aa13.38□□□□□ -0.27
MTHFD1-208ENST00000554739 ADCY5O95622 1261 aa13.38□□□□□ -0.27
MTHFD1-208ENST00000554739 FTLP02792 175 aaPredicted RBP13.38□□□□□ -0.27
MTHFD1-208ENST00000554739 PDGFRAP16234 1089 aa13.38□□□□□ -0.27
MTHFD1-208ENST00000554739 TACR2P21452 398 aa13.38□□□□□ -0.27
MTHFD1-208ENST00000554739 RRM1P23921 792 aa13.38□□□□□ -0.27
MTHFD1-208ENST00000554739 HOXA6P31267 233 aa13.38□□□□□ -0.27
MTHFD1-208ENST00000554739 DEUP1Q05D60 604 aa13.38□□□□□ -0.27
MTHFD1-208ENST00000554739 MTA1Q13330 715 aa13.38□□□□□ -0.27
MTHFD1-208ENST00000554739 GEN1Q17RS7 908 aa13.38□□□□□ -0.27
MTHFD1-208ENST00000554739 PPP1R15BQ5SWA1 713 aa13.38□□□□□ -0.27
MTHFD1-208ENST00000554739 RAP1GAP2Q684P5 730 aa13.38□□□□□ -0.27
MTHFD1-208ENST00000554739 DRC7Q8IY82 874 aa13.38□□□□□ -0.27
MTHFD1-208ENST00000554739 IL17RCQ8NAC3 791 aa13.38□□□□□ -0.27
MTHFD1-208ENST00000554739 CENPIQ92674 756 aaPredicted RBP13.38□□□□□ -0.27
MTHFD1-208ENST00000554739 CFAP57Q96MR6 1250 aa13.38□□□□□ -0.27
MTHFD1-208ENST00000554739 PRICKLE1Q96MT3 831 aaPredicted RBP13.38□□□□□ -0.27
MTHFD1-208ENST00000554739 WDCPQ9H6R7 721 aa13.38□□□□□ -0.27
MTHFD1-208ENST00000554739 ANLNQ9NQW6 1124 aa13.38□□□□□ -0.27
MTHFD1-208ENST00000554739 ARHGEF38Q9NXL2 777 aa13.38□□□□□ -0.27
MTHFD1-208ENST00000554739 RTN2O75298 545 aa13.37□□□□□ -0.27
MTHFD1-208ENST00000554739 PLEKP08567 350 aaPredicted RBP13.37□□□□□ -0.27
MTHFD1-208ENST00000554739 HLA-FP30511 346 aa13.37□□□□□ -0.27
MTHFD1-208ENST00000554739 TIE1P35590 1138 aa13.37□□□□□ -0.27
MTHFD1-208ENST00000554739 PTPN9P43378 593 aa13.37□□□□□ -0.27
MTHFD1-208ENST00000554739 ATXN1P54253 815 aaKnown RBP13.37□□□□□ -0.27
MTHFD1-208ENST00000554739 RPS24P62847 133 aaKnown RBP13.37□□□□□ -0.27
MTHFD1-208ENST00000554739 ATP11AP98196 1134 aa13.37□□□□□ -0.27
MTHFD1-208ENST00000554739 MAMLD1Q13495 774 aa13.37□□□□□ -0.27
MTHFD1-208ENST00000554739 AUHQ13825 339 aaKnown RBP13.37□□□□□ -0.27
MTHFD1-208ENST00000554739 ARID5BQ14865 1188 aa13.37□□□□□ -0.27
MTHFD1-208ENST00000554739 BRMS1LQ5PSV4 323 aa13.37□□□□□ -0.27
MTHFD1-208ENST00000554739 SH3PXD2AQ5TCZ1 1133 aa13.37□□□□□ -0.27
MTHFD1-208ENST00000554739 WDR59Q6PJI9 974 aa13.37□□□□□ -0.27
MTHFD1-208ENST00000554739 SND1Q7KZF4 910 aaKnown RBP eCLIP13.37□□□□□ -0.27
MTHFD1-208ENST00000554739 KIAA0907Q7Z7F0 614 aaPredicted RBP13.37□□□□□ -0.27
MTHFD1-208ENST00000554739 DNAAF5Q86Y56 855 aa13.37□□□□□ -0.27
MTHFD1-208ENST00000554739 LGI2Q8N0V4 545 aa13.37□□□□□ -0.27
MTHFD1-208ENST00000554739 CFAP52Q8N1V2 620 aa13.37□□□□□ -0.27
MTHFD1-208ENST00000554739 CCDC33Q8N5R6 958 aa13.37□□□□□ -0.27
MTHFD1-208ENST00000554739 ALLCQ8N6M5 410 aa13.37□□□□□ -0.27
MTHFD1-208ENST00000554739 HJURPQ8NCD3 748 aaPredicted RBP13.37□□□□□ -0.27
MTHFD1-208ENST00000554739 OR8K1Q8NGG5 319 aa13.37□□□□□ -0.27
MTHFD1-208ENST00000554739 FIBINQ8TAL6 211 aa13.37□□□□□ -0.27
MTHFD1-208ENST00000554739 DNAJC7Q99615 494 aa13.37□□□□□ -0.27
MTHFD1-208ENST00000554739 SELENOOQ9BVL4 669 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms