RNA–Protein interactions for RNA: ENST00000552374.6

TMEM116-215, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM116, Length 1,408 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-215ENST00000552374 BEND5Q7L4P6 421 aa11.34□□□□□ -0.59
TMEM116-215ENST00000552374 LPCAT2Q7L5N7 544 aa11.34□□□□□ -0.59
TMEM116-215ENST00000552374 DGLUCYQ7Z3D6 616 aa11.34□□□□□ -0.59
TMEM116-215ENST00000552374 TMEFF1Q8IYR6 380 aa11.34□□□□□ -0.59
TMEM116-215ENST00000552374 DEFB119Q8N690 84 aa11.34□□□□□ -0.59
TMEM116-215ENST00000552374 C12orf50Q8NA57 414 aaPredicted RBP11.34□□□□□ -0.59
TMEM116-215ENST00000552374 TMEM35BQ8NCS4 154 aa11.34□□□□□ -0.59
TMEM116-215ENST00000552374 ANKRD20A12PQ8NF67 263 aa11.34□□□□□ -0.59
TMEM116-215ENST00000552374 OLIG1Q8TAK6 271 aa11.34□□□□□ -0.59
TMEM116-215ENST00000552374 CYB5D2Q8WUJ1 264 aa11.34□□□□□ -0.59
TMEM116-215ENST00000552374 AZIN2Q96A70 460 aa11.34□□□□□ -0.59
TMEM116-215ENST00000552374 SLC39A13Q96H72 371 aa11.34□□□□□ -0.59
TMEM116-215ENST00000552374 PCMTD1Q96MG8 357 aaPredicted RBP11.34□□□□□ -0.59
TMEM116-215ENST00000552374 GABRG3Q99928 467 aa11.34□□□□□ -0.59
TMEM116-215ENST00000552374 NAA15Q9BXJ9 866 aaKnown RBP11.34□□□□□ -0.59
TMEM116-215ENST00000552374 NUCKS1Q9H1E3 243 aaKnown RBP11.34□□□□□ -0.59
TMEM116-215ENST00000552374 FAM204AQ9H8W3 233 aa11.34□□□□□ -0.59
TMEM116-215ENST00000552374 CALCOCO1Q9P1Z2 691 aa11.34□□□□□ -0.59
TMEM116-215ENST00000552374 THAP10Q9P2Z0 257 aaPredicted RBP11.34□□□□□ -0.59
TMEM116-215ENST00000552374 SLC12A6Q9UHW9 1150 aa11.34□□□□□ -0.59
TMEM116-215ENST00000552374 XPO7Q9UIA9 1087 aaKnown RBP11.34□□□□□ -0.59
TMEM116-215ENST00000552374 MBD1Q9UIS9 605 aaPredicted RBP11.34□□□□□ -0.59
TMEM116-215ENST00000552374 CDV3Q9UKY7 258 aaKnown RBP11.34□□□□□ -0.59
TMEM116-215ENST00000552374 PLA2G4CQ9UP65 541 aa11.34□□□□□ -0.59
TMEM116-215ENST00000552374 PCDHGA5Q9Y5G8 931 aa11.34□□□□□ -0.59
TMEM116-215ENST00000552374 TYW5A2RUC4 315 aaKnown RBP11.33□□□□□ -0.6
TMEM116-215ENST00000552374 NPC1O15118 1278 aa11.33□□□□□ -0.6
TMEM116-215ENST00000552374 IRAK2O43187 625 aa11.33□□□□□ -0.6
TMEM116-215ENST00000552374 APOEP02649 317 aa11.33□□□□□ -0.6
TMEM116-215ENST00000552374 GLI1P08151 1106 aa11.33□□□□□ -0.6
TMEM116-215ENST00000552374 ZNF806P0C7X5 589 aa11.33□□□□□ -0.6
TMEM116-215ENST00000552374 NDUFV2P19404 249 aa11.33□□□□□ -0.6
TMEM116-215ENST00000552374 SDHBP21912 280 aa11.33□□□□□ -0.6
TMEM116-215ENST00000552374 HLA-FP30511 346 aa11.33□□□□□ -0.6
TMEM116-215ENST00000552374 IL12RB1P42701 662 aa11.33□□□□□ -0.6
TMEM116-215ENST00000552374 COPB1P53618 953 aaKnown RBP11.33□□□□□ -0.6
TMEM116-215ENST00000552374 POLR2FP61218 127 aaKnown RBP11.33□□□□□ -0.6
TMEM116-215ENST00000552374 RPS24P62847 133 aaKnown RBP11.33□□□□□ -0.6
TMEM116-215ENST00000552374 SLC6A3Q01959 620 aa11.33□□□□□ -0.6
TMEM116-215ENST00000552374 MYL5Q02045 173 aa11.33□□□□□ -0.6
TMEM116-215ENST00000552374 RAP1GAP2Q684P5 730 aa11.33□□□□□ -0.6
TMEM116-215ENST00000552374 PMS2CLQ68D20 193 aa11.33□□□□□ -0.6
TMEM116-215ENST00000552374 KIAA1324Q6UXG2 1013 aaKnown RBP11.33□□□□□ -0.6
TMEM116-215ENST00000552374 SERPINA13PQ6UXR4 307 aa11.33□□□□□ -0.6
TMEM116-215ENST00000552374 CHST9Q7L1S5 443 aa11.33□□□□□ -0.6
TMEM116-215ENST00000552374 ARMCX6Q7L4S7 300 aa11.33□□□□□ -0.6
TMEM116-215ENST00000552374 CCDC117Q8IWD4 279 aaPredicted RBP11.33□□□□□ -0.6
TMEM116-215ENST00000552374 LGI2Q8N0V4 545 aa11.33□□□□□ -0.6
TMEM116-215ENST00000552374 CFAP52Q8N1V2 620 aa11.33□□□□□ -0.6
TMEM116-215ENST00000552374 CARNMT1Q8N4J0 409 aa11.33□□□□□ -0.6
TMEM116-215ENST00000552374 PIGKQ92643 395 aa11.33□□□□□ -0.6
TMEM116-215ENST00000552374 MYEOVQ96EZ4 313 aa11.33□□□□□ -0.6
TMEM116-215ENST00000552374 MRGPRX1Q96LB2 322 aa11.33□□□□□ -0.6
TMEM116-215ENST00000552374 NLRC4Q9NPP4 1024 aa11.33□□□□□ -0.6
TMEM116-215ENST00000552374 VPS45Q9NRW7 570 aa11.33□□□□□ -0.6
TMEM116-215ENST00000552374 FAM207AQ9NSI2 230 aaPredicted RBP11.33□□□□□ -0.6
TMEM116-215ENST00000552374 DDIT4Q9NX09 232 aa11.33□□□□□ -0.6
TMEM116-215ENST00000552374 DLL3Q9NYJ7 618 aa11.33□□□□□ -0.6
TMEM116-215ENST00000552374 TMEM63CQ9P1W3 806 aa11.33□□□□□ -0.6
TMEM116-215ENST00000552374 CEP250Q9BV73 2442 aa11.32□□□□□ -0.6
TMEM116-215ENST00000552374 MYO16Q9Y6X6 1858 aa11.32□□□□□ -0.6
TMEM116-215ENST00000552374 BCLAF3A2AJT9 711 aaKnown RBP11.32□□□□□ -0.6
TMEM116-215ENST00000552374 DCDC2BA2VCK2 349 aa11.32□□□□□ -0.6
TMEM116-215ENST00000552374 F8VZ95 297 aa11.32□□□□□ -0.6
TMEM116-215ENST00000552374 HSF2BPO75031 334 aa11.32□□□□□ -0.6
TMEM116-215ENST00000552374 ZNF217O75362 1048 aa11.32□□□□□ -0.6
TMEM116-215ENST00000552374 GFPT2O94808 682 aa11.32□□□□□ -0.6
TMEM116-215ENST00000552374 EPHX1P07099 455 aa11.32□□□□□ -0.6
TMEM116-215ENST00000552374 PABPC1P11940 636 aaKnown RBP11.32□□□□□ -0.6
TMEM116-215ENST00000552374 HLA-EP13747 358 aa11.32□□□□□ -0.6
TMEM116-215ENST00000552374 POLR2EP19388 210 aaKnown RBP11.32□□□□□ -0.6
TMEM116-215ENST00000552374 ABCB4P21439 1286 aa11.32□□□□□ -0.6
TMEM116-215ENST00000552374 CD70P32970 193 aa11.32□□□□□ -0.6
TMEM116-215ENST00000552374 UBXN1Q04323 297 aa11.32□□□□□ -0.6
TMEM116-215ENST00000552374 TYRO3Q06418 890 aa11.32□□□□□ -0.6
TMEM116-215ENST00000552374 NME3Q13232 169 aa11.32□□□□□ -0.6
TMEM116-215ENST00000552374 NNTQ13423 1086 aa11.32□□□□□ -0.6
TMEM116-215ENST00000552374 EIF4HQ15056 248 aaKnown RBP11.32□□□□□ -0.6
TMEM116-215ENST00000552374 E2F5Q15329 346 aa11.32□□□□□ -0.6
TMEM116-215ENST00000552374 FUT11Q495W5 492 aa11.32□□□□□ -0.6
TMEM116-215ENST00000552374 PTPN20Q4JDL3 420 aa11.32□□□□□ -0.6
TMEM116-215ENST00000552374 FNDC3BQ53EP0 1204 aaKnown RBP11.32□□□□□ -0.6
TMEM116-215ENST00000552374 MS4A13Q5J8X5 152 aa11.32□□□□□ -0.6
TMEM116-215ENST00000552374 MPP7Q5T2T1 576 aa11.32□□□□□ -0.6
TMEM116-215ENST00000552374 MBLAC2Q68D91 279 aa11.32□□□□□ -0.6
TMEM116-215ENST00000552374 SMYD5Q6GMV2 418 aa11.32□□□□□ -0.6
TMEM116-215ENST00000552374 TCEAL6Q6IPX3 200 aa11.32□□□□□ -0.6
TMEM116-215ENST00000552374 OLFML1Q6UWY5 402 aa11.32□□□□□ -0.6
TMEM116-215ENST00000552374 CYP2U1Q7Z449 544 aa11.32□□□□□ -0.6
TMEM116-215ENST00000552374 NOP9Q86U38 636 aaKnown RBP11.32□□□□□ -0.6
TMEM116-215ENST00000552374 ERICH1Q86X53 443 aa11.32□□□□□ -0.6
TMEM116-215ENST00000552374 MFN1Q8IWA4 741 aa11.32□□□□□ -0.6
TMEM116-215ENST00000552374 ATP6V0D2Q8N8Y2 350 aa11.32□□□□□ -0.6
TMEM116-215ENST00000552374 WFDC5Q8TCV5 224 aa11.32□□□□□ -0.6
TMEM116-215ENST00000552374 CPA5Q8WXQ8 436 aa11.32□□□□□ -0.6
TMEM116-215ENST00000552374 TCEAL3Q969E4 200 aa11.32□□□□□ -0.6
TMEM116-215ENST00000552374 C18orf8Q96DM3 657 aa11.32□□□□□ -0.6
TMEM116-215ENST00000552374 SLC2A13Q96QE2 648 aa11.32□□□□□ -0.6
TMEM116-215ENST00000552374 CD248Q9HCU0 757 aa11.32□□□□□ -0.6
TMEM116-215ENST00000552374 RXFP3Q9NSD7 469 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms