RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 HJURPQ8NCD3 748 aaPredicted RBP11.59□□□□□ -0.55
PTPRK-221ENST00000532331 CMTM5Q96DZ9 223 aa11.59□□□□□ -0.55
PTPRK-221ENST00000532331 DACH2Q96NX9 599 aa11.59□□□□□ -0.55
PTPRK-221ENST00000532331 NR1H4Q96RI1 486 aaPredicted RBP11.59□□□□□ -0.55
PTPRK-221ENST00000532331 NMRK1Q9NWW6 199 aa11.59□□□□□ -0.55
PTPRK-221ENST00000532331 GGT7Q9UJ14 662 aa11.59□□□□□ -0.55
PTPRK-221ENST00000532331 RPS6KL1Q9Y6S9 549 aa11.59□□□□□ -0.55
PTPRK-221ENST00000532331 A0A0A6YYK5 440 aaPredicted RBP11.59□□□□□ -0.55
PTPRK-221ENST00000532331 TRIM49D1C9J1S8 452 aa11.59□□□□□ -0.55
PTPRK-221ENST00000532331 E5RJQ4 531 aa11.59□□□□□ -0.55
PTPRK-221ENST00000532331 PTPN3P26045 913 aa11.59□□□□□ -0.55
PTPRK-221ENST00000532331 POU4F1Q01851 419 aa11.59□□□□□ -0.55
PTPRK-221ENST00000532331 MCL1Q07820 350 aa11.59□□□□□ -0.55
PTPRK-221ENST00000532331 SETMARQ53H47 684 aaPredicted RBP11.59□□□□□ -0.55
PTPRK-221ENST00000532331 DOK6Q6PKX4 331 aa11.59□□□□□ -0.55
PTPRK-221ENST00000532331 AGGF1Q8N302 714 aaeCLIP11.59□□□□□ -0.55
PTPRK-221ENST00000532331 BRD8Q9H0E9 1235 aa11.59□□□□□ -0.55
PTPRK-221ENST00000532331 AHDC1Q5TGY3 1603 aaPredicted RBP11.59□□□□□ -0.55
PTPRK-221ENST00000532331 APODP05090 189 aa11.59□□□□□ -0.55
PTPRK-221ENST00000532331 CCND3P30281 292 aaPredicted RBP11.59□□□□□ -0.55
PTPRK-221ENST00000532331 C21orf59P57076 290 aa11.59□□□□□ -0.55
PTPRK-221ENST00000532331 SNRPD1P62314 119 aaKnown RBP11.59□□□□□ -0.55
PTPRK-221ENST00000532331 ARMC12Q5T9G4 340 aa11.59□□□□□ -0.55
PTPRK-221ENST00000532331 FAM46CQ5VWP2 391 aa11.59□□□□□ -0.55
PTPRK-221ENST00000532331 SEPT3Q9UH03 358 aa11.59□□□□□ -0.55
PTPRK-221ENST00000532331 CASZ1Q86V15 1759 aa11.58□□□□□ -0.55
PTPRK-221ENST00000532331 NOS2P35228 1153 aa11.58□□□□□ -0.55
PTPRK-221ENST00000532331 OTUD4Q01804 1114 aaKnown RBP11.58□□□□□ -0.55
PTPRK-221ENST00000532331 DUSP4Q13115 394 aa11.58□□□□□ -0.55
PTPRK-221ENST00000532331 FLOT2Q14254 428 aa11.58□□□□□ -0.55
PTPRK-221ENST00000532331 SGO1Q5FBB7 561 aa11.58□□□□□ -0.55
PTPRK-221ENST00000532331 AGAP9Q5VTM2 703 aa11.58□□□□□ -0.55
PTPRK-221ENST00000532331 RAP1GAP2Q684P5 730 aa11.58□□□□□ -0.55
PTPRK-221ENST00000532331 SPOCD1Q6ZMY3 1216 aa11.58□□□□□ -0.55
PTPRK-221ENST00000532331 SETD3Q86TU7 594 aaPredicted RBP11.58□□□□□ -0.55
PTPRK-221ENST00000532331 REXO1L1PQ8IX06 675 aa11.58□□□□□ -0.55
PTPRK-221ENST00000532331 MCOLN2Q8IZK6 566 aa11.58□□□□□ -0.55
PTPRK-221ENST00000532331 PNKPQ96T60 521 aa11.58□□□□□ -0.55
PTPRK-221ENST00000532331 GID8Q9NWU2 228 aa11.58□□□□□ -0.55
PTPRK-221ENST00000532331 SDR42E2A6NKP2 422 aa11.58□□□□□ -0.56
PTPRK-221ENST00000532331 LYPLA2O95372 231 aa11.58□□□□□ -0.56
PTPRK-221ENST00000532331 GLP2RO95838 553 aa11.58□□□□□ -0.56
PTPRK-221ENST00000532331 PDHA1P08559 390 aa11.58□□□□□ -0.56
PTPRK-221ENST00000532331 CDH2P19022 906 aaPredicted RBP11.58□□□□□ -0.56
PTPRK-221ENST00000532331 MED21Q13503 144 aa11.58□□□□□ -0.56
PTPRK-221ENST00000532331 CHI3L2Q15782 390 aa11.58□□□□□ -0.56
PTPRK-221ENST00000532331 SDHAF4Q5VUM1 108 aa11.58□□□□□ -0.56
PTPRK-221ENST00000532331 USP45Q70EL2 814 aa11.58□□□□□ -0.56
PTPRK-221ENST00000532331 PIK3R5Q8WYR1 880 aa11.58□□□□□ -0.56
PTPRK-221ENST00000532331 MAGEB10Q96LZ2 347 aaPredicted RBP11.58□□□□□ -0.56
PTPRK-221ENST00000532331 ADAM28Q9UKQ2 775 aa11.58□□□□□ -0.56
PTPRK-221ENST00000532331 CNTNAP1P78357 1384 aa11.58□□□□□ -0.56
PTPRK-221ENST00000532331 SLC10A3P09131 477 aa11.58□□□□□ -0.56
PTPRK-221ENST00000532331 PRLRP16471 622 aa11.58□□□□□ -0.56
PTPRK-221ENST00000532331 MAP3K10Q02779 954 aa11.58□□□□□ -0.56
PTPRK-221ENST00000532331 PRR23CQ6ZRP0 262 aa11.58□□□□□ -0.56
PTPRK-221ENST00000532331 AMIGO3Q86WK7 504 aa11.58□□□□□ -0.56
PTPRK-221ENST00000532331 VPS37AQ8NEZ2 397 aa11.58□□□□□ -0.56
PTPRK-221ENST00000532331 GRIN3AQ8TCU5 1115 aa11.58□□□□□ -0.56
PTPRK-221ENST00000532331 HSFY1Q96LI6 401 aa11.58□□□□□ -0.56
PTPRK-221ENST00000532331 FAM167BQ9BTA0 163 aa11.58□□□□□ -0.56
PTPRK-221ENST00000532331 EOMESO95936 686 aa11.58□□□□□ -0.56
PTPRK-221ENST00000532331 OCM2P0CE71 109 aa11.58□□□□□ -0.56
PTPRK-221ENST00000532331 OCMP0CE72 109 aaPredicted RBP11.58□□□□□ -0.56
PTPRK-221ENST00000532331 KCNK10P57789 538 aa11.58□□□□□ -0.56
PTPRK-221ENST00000532331 LRRC74AQ0VAA2 488 aa11.58□□□□□ -0.56
PTPRK-221ENST00000532331 EXD1Q8NHP7 514 aa11.58□□□□□ -0.56
PTPRK-221ENST00000532331 OSCP1Q8WVF1 389 aa11.58□□□□□ -0.56
PTPRK-221ENST00000532331 WNT8BQ93098 351 aa11.58□□□□□ -0.56
PTPRK-221ENST00000532331 VCPIP1Q96JH7 1222 aa11.58□□□□□ -0.56
PTPRK-221ENST00000532331 PRPF18Q99633 342 aaKnown RBP11.58□□□□□ -0.56
PTPRK-221ENST00000532331 HSD17B14Q9BPX1 270 aa11.58□□□□□ -0.56
PTPRK-221ENST00000532331 NAT9Q9BTE0 207 aa11.58□□□□□ -0.56
PTPRK-221ENST00000532331 MAP10Q9P2G4 905 aa11.58□□□□□ -0.56
PTPRK-221ENST00000532331 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.58□□□□□ -0.56
PTPRK-221ENST00000532331 TRPC5OSA6NMA1 111 aa11.58□□□□□ -0.56
PTPRK-221ENST00000532331 ARIH2O95376 493 aa11.58□□□□□ -0.56
PTPRK-221ENST00000532331 ALOX15P16050 662 aaPredicted RBP11.58□□□□□ -0.56
PTPRK-221ENST00000532331 NCKAP1LP55160 1127 aa11.58□□□□□ -0.56
PTPRK-221ENST00000532331 TGM3Q08188 693 aa11.58□□□□□ -0.56
PTPRK-221ENST00000532331 E2F4Q16254 413 aa11.58□□□□□ -0.56
PTPRK-221ENST00000532331 LRRC6Q86X45 466 aa11.58□□□□□ -0.56
PTPRK-221ENST00000532331 ATG4AQ8WYN0 398 aa11.58□□□□□ -0.56
PTPRK-221ENST00000532331 WHRNQ9P202 907 aa11.58□□□□□ -0.56
PTPRK-221ENST00000532331 INSL6Q9Y581 213 aa11.58□□□□□ -0.56
PTPRK-221ENST00000532331 TRUB2O95900 331 aaKnown RBP11.57□□□□□ -0.56
PTPRK-221ENST00000532331 CCNE2O96020 404 aa11.57□□□□□ -0.56
PTPRK-221ENST00000532331 PTPN7P35236 360 aa11.57□□□□□ -0.56
PTPRK-221ENST00000532331 HPCAP84074 193 aa11.57□□□□□ -0.56
PTPRK-221ENST00000532331 TP53BP2Q13625 1128 aa11.57□□□□□ -0.56
PTPRK-221ENST00000532331 CDKAL1Q5VV42 579 aa11.57□□□□□ -0.56
PTPRK-221ENST00000532331 FUT10Q6P4F1 479 aa11.57□□□□□ -0.56
PTPRK-221ENST00000532331 CNKSR3Q6P9H4 555 aa11.57□□□□□ -0.56
PTPRK-221ENST00000532331 RBM43Q6ZSC3 357 aaKnown RBP11.57□□□□□ -0.56
PTPRK-221ENST00000532331 LONP2Q86WA8 852 aa11.57□□□□□ -0.56
PTPRK-221ENST00000532331 CLEC4DQ8WXI8 215 aa11.57□□□□□ -0.56
PTPRK-221ENST00000532331 KAT2BQ92831 832 aa11.57□□□□□ -0.56
PTPRK-221ENST00000532331 SLC35C1Q96A29 364 aa11.57□□□□□ -0.56
PTPRK-221ENST00000532331 TSC22D3Q99576 134 aa11.57□□□□□ -0.56
PTPRK-221ENST00000532331 APOL2Q9BQE5 337 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms