RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 CAPNS2Q96L46 248 aa5.03□□□□□ -1.6
USP48-211ENST00000526044 LRGUKQ96M69 825 aa5.03□□□□□ -1.6
USP48-211ENST00000526044 RPS6KC1Q96S38 1066 aa5.03□□□□□ -1.6
USP48-211ENST00000526044 SLF1Q9BQI6 1058 aa5.03□□□□□ -1.6
USP48-211ENST00000526044 TTPALQ9BTX7 342 aa5.03□□□□□ -1.6
USP48-211ENST00000526044 SPZ1Q9BXG8 430 aa5.03□□□□□ -1.6
USP48-211ENST00000526044 TLR10Q9BXR5 811 aa5.03□□□□□ -1.6
USP48-211ENST00000526044 SLC26A6Q9BXS9 759 aa5.03□□□□□ -1.6
USP48-211ENST00000526044 RNF26Q9BY78 433 aaPredicted RBP5.03□□□□□ -1.6
USP48-211ENST00000526044 MAF1Q9H063 256 aa5.03□□□□□ -1.6
USP48-211ENST00000526044 CPVLQ9H3G5 476 aa5.03□□□□□ -1.6
USP48-211ENST00000526044 JMJD4Q9H9V9 463 aa5.03□□□□□ -1.6
USP48-211ENST00000526044 FBXO28Q9NVF7 368 aa5.03□□□□□ -1.6
USP48-211ENST00000526044 ORC3Q9UBD5 711 aaPredicted RBP5.03□□□□□ -1.6
USP48-211ENST00000526044 SEC63Q9UGP8 760 aaKnown RBP5.03□□□□□ -1.6
USP48-211ENST00000526044 TCEAL9Q9UHQ7 104 aa5.03□□□□□ -1.6
USP48-211ENST00000526044 AGTPBP1Q9UPW5 1226 aa5.03□□□□□ -1.6
USP48-211ENST00000526044 CDYLQ9Y232 598 aa5.03□□□□□ -1.6
USP48-211ENST00000526044 SLC45A1Q9Y2W3 748 aa5.03□□□□□ -1.6
USP48-211ENST00000526044 NEU2Q9Y3R4 380 aa5.03□□□□□ -1.6
USP48-211ENST00000526044 KIF3AQ9Y496 699 aa5.03□□□□□ -1.6
USP48-211ENST00000526044 NR2E3Q9Y5X4 410 aa5.03□□□□□ -1.6
USP48-211ENST00000526044 PTPRFP10586 1907 aa5.03□□□□□ -1.6
USP48-211ENST00000526044 NID2Q14112 1375 aa5.03□□□□□ -1.6
USP48-211ENST00000526044 hCG_1642624A0A1W2PR95 340 aa5.02□□□□□ -1.61
USP48-211ENST00000526044 PRSS29PA6NIE9 313 aa5.02□□□□□ -1.61
USP48-211ENST00000526044 BTBD19C9JJ37 291 aa5.02□□□□□ -1.61
USP48-211ENST00000526044 VWA5AO00534 786 aa5.02□□□□□ -1.61
USP48-211ENST00000526044 ZBTB5O15062 677 aa5.02□□□□□ -1.61
USP48-211ENST00000526044 DEXIO95424 95 aa5.02□□□□□ -1.61
USP48-211ENST00000526044 ALDH2P05091 517 aa5.02□□□□□ -1.61
USP48-211ENST00000526044 FDPSP14324 419 aaKnown RBP5.02□□□□□ -1.61
USP48-211ENST00000526044 XBP1P17861 261 aa5.02□□□□□ -1.61
USP48-211ENST00000526044 LPOP22079 712 aaPredicted RBP5.02□□□□□ -1.61
USP48-211ENST00000526044 GJB2P29033 226 aa5.02□□□□□ -1.61
USP48-211ENST00000526044 MAP2K2P36507 400 aa5.02□□□□□ -1.61
USP48-211ENST00000526044 AVPR1BP47901 424 aa5.02□□□□□ -1.61
USP48-211ENST00000526044 VAV2P52735 878 aa5.02□□□□□ -1.61
USP48-211ENST00000526044 SNAP25P60880 206 aa5.02□□□□□ -1.61
USP48-211ENST00000526044 POU6F2P78424 691 aaPredicted RBP5.02□□□□□ -1.61
USP48-211ENST00000526044 NKX6-1P78426 367 aaPredicted RBP5.02□□□□□ -1.61
USP48-211ENST00000526044 PIGFQ07326 219 aa5.02□□□□□ -1.61
USP48-211ENST00000526044 ST3GAL1Q11201 340 aa5.02□□□□□ -1.61
USP48-211ENST00000526044 SREBF2Q12772 1141 aa5.02□□□□□ -1.61
USP48-211ENST00000526044 TRAF1Q13077 416 aa5.02□□□□□ -1.61
USP48-211ENST00000526044 BIRC2Q13490 618 aa5.02□□□□□ -1.61
USP48-211ENST00000526044 TRIM29Q14134 588 aa5.02□□□□□ -1.61
USP48-211ENST00000526044 KIF22Q14807 665 aa5.02□□□□□ -1.61
USP48-211ENST00000526044 PPP2R5AQ15172 486 aa5.02□□□□□ -1.61
USP48-211ENST00000526044 CDC37Q16543 378 aaPredicted RBP5.02□□□□□ -1.61
USP48-211ENST00000526044 CXorf57Q6NSI4 855 aaKnown RBP5.02□□□□□ -1.61
USP48-211ENST00000526044 RASGRP2Q7LDG7 609 aa5.02□□□□□ -1.61
USP48-211ENST00000526044 GPR149Q86SP6 731 aa5.02□□□□□ -1.61
USP48-211ENST00000526044 CPXCR1Q8N123 301 aa5.02□□□□□ -1.61
USP48-211ENST00000526044 CFAP52Q8N1V2 620 aa5.02□□□□□ -1.61
USP48-211ENST00000526044 CAMKK1Q8N5S9 505 aa5.02□□□□□ -1.61
USP48-211ENST00000526044 Q8NA96 180 aa5.02□□□□□ -1.61
USP48-211ENST00000526044 PDPRQ8NCN5 879 aa5.02□□□□□ -1.61
USP48-211ENST00000526044 BRI3BPQ8WY22 251 aa5.02□□□□□ -1.61
USP48-211ENST00000526044 TNPO1Q92973 898 aaKnown RBP5.02□□□□□ -1.61
USP48-211ENST00000526044 PKNOX2Q96KN3 472 aa5.02□□□□□ -1.61
USP48-211ENST00000526044 PIGSQ96S52 555 aa5.02□□□□□ -1.61
USP48-211ENST00000526044 CGRRF1Q99675 332 aa5.02□□□□□ -1.61
USP48-211ENST00000526044 C1orf43Q9BWL3 253 aa5.02□□□□□ -1.61
USP48-211ENST00000526044 MRPL46Q9H2W6 279 aaKnown RBP5.02□□□□□ -1.61
USP48-211ENST00000526044 SLC38A10Q9HBR0 1119 aa5.02□□□□□ -1.61
USP48-211ENST00000526044 ZCCHC17Q9NP64 241 aaKnown RBP5.02□□□□□ -1.61
USP48-211ENST00000526044 SLAMF7Q9NQ25 335 aa5.02□□□□□ -1.61
USP48-211ENST00000526044 TBCCD1Q9NVR7 557 aa5.02□□□□□ -1.61
USP48-211ENST00000526044 ZDHHC8Q9ULC8 765 aa5.02□□□□□ -1.61
USP48-211ENST00000526044 ADAMTS5Q9UNA0 930 aa5.02□□□□□ -1.61
USP48-211ENST00000526044 STXBP5LQ9Y2K9 1186 aa5.02□□□□□ -1.61
USP48-211ENST00000526044 RPS6KL1Q9Y6S9 549 aa5.02□□□□□ -1.61
USP48-211ENST00000526044 BAZ2BQ9UIF8 2168 aaKnown RBP5.02□□□□□ -1.61
USP48-211ENST00000526044 STK36Q9NRP7 1315 aa5.01□□□□□ -1.61
USP48-211ENST00000526044 A0A087X1B8 175 aa5.01□□□□□ -1.61
USP48-211ENST00000526044 A0A1W2PS29 197 aa5.01□□□□□ -1.61
USP48-211ENST00000526044 H3BQV1 296 aa5.01□□□□□ -1.61
USP48-211ENST00000526044 JAK2O60674 1132 aa5.01□□□□□ -1.61
USP48-211ENST00000526044 RHOBTB3O94955 611 aa5.01□□□□□ -1.61
USP48-211ENST00000526044 CHEK2O96017 543 aa5.01□□□□□ -1.61
USP48-211ENST00000526044 HKR1P10072 659 aa5.01□□□□□ -1.61
USP48-211ENST00000526044 RARBP10826 455 aa5.01□□□□□ -1.61
USP48-211ENST00000526044 ITGAMP11215 1152 aa5.01□□□□□ -1.61
USP48-211ENST00000526044 SCG2P13521 617 aa5.01□□□□□ -1.61
USP48-211ENST00000526044 KCNA2P16389 499 aa5.01□□□□□ -1.61
USP48-211ENST00000526044 GCLCP48506 637 aaPredicted RBP5.01□□□□□ -1.61
USP48-211ENST00000526044 MRPL12P52815 198 aaKnown RBP5.01□□□□□ -1.61
USP48-211ENST00000526044 OAZ1P54368 228 aa5.01□□□□□ -1.61
USP48-211ENST00000526044 NLRP5P59047 1200 aa5.01□□□□□ -1.61
USP48-211ENST00000526044 PSMC1P62191 440 aaKnown RBP5.01□□□□□ -1.61
USP48-211ENST00000526044 PLS1Q14651 629 aa5.01□□□□□ -1.61
USP48-211ENST00000526044 PFKFB3Q16875 520 aaPredicted RBP5.01□□□□□ -1.61
USP48-211ENST00000526044 SLC35G1Q2M3R5 365 aa5.01□□□□□ -1.61
USP48-211ENST00000526044 QRICH1Q2TAL8 776 aa5.01□□□□□ -1.61
USP48-211ENST00000526044 LONRF3Q496Y0 759 aa5.01□□□□□ -1.61
USP48-211ENST00000526044 C4orf46Q504U0 113 aa5.01□□□□□ -1.61
USP48-211ENST00000526044 FAM102BQ5T8I3 360 aa5.01□□□□□ -1.61
USP48-211ENST00000526044 SP5Q6BEB4 398 aaPredicted RBP5.01□□□□□ -1.61
USP48-211ENST00000526044 CCDC174Q6PII3 467 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms