RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 HNRNPH1P31943 449 aaKnown RBP11.7□□□□□ -0.54
CLK4-206ENST00000520878 ATN1P54259 1190 aaPredicted RBP11.7□□□□□ -0.54
CLK4-206ENST00000520878 SP3Q02447 781 aa11.7□□□□□ -0.54
CLK4-206ENST00000520878 DPYSL2Q16555 572 aa11.7□□□□□ -0.54
CLK4-206ENST00000520878 C16orf46Q6P387 395 aa11.7□□□□□ -0.54
CLK4-206ENST00000520878 PCSK9Q8NBP7 692 aaKnown RBP11.7□□□□□ -0.54
CLK4-206ENST00000520878 URGCPQ8TCY9 931 aa11.7□□□□□ -0.54
CLK4-206ENST00000520878 SPATA13Q96N96 652 aa11.7□□□□□ -0.54
CLK4-206ENST00000520878 TMEM209Q96SK2 561 aa11.7□□□□□ -0.54
CLK4-206ENST00000520878 SMOQ99835 787 aa11.7□□□□□ -0.54
CLK4-206ENST00000520878 ZNFX1Q9P2E3 1918 aaKnown RBP11.7□□□□□ -0.54
CLK4-206ENST00000520878 LGALS13Q9UHV8 139 aa11.7□□□□□ -0.54
CLK4-206ENST00000520878 TRIM33Q9UPN9 1127 aa11.7□□□□□ -0.54
CLK4-206ENST00000520878 CXorf49A8MYA2 514 aaPredicted RBP11.69□□□□□ -0.54
CLK4-206ENST00000520878 FAM72CH0Y354 149 aa11.69□□□□□ -0.54
CLK4-206ENST00000520878 FBXO21O94952 628 aa11.69□□□□□ -0.54
CLK4-206ENST00000520878 SLC4A1P02730 911 aa11.69□□□□□ -0.54
CLK4-206ENST00000520878 WARSP23381 471 aaKnown RBP11.69□□□□□ -0.54
CLK4-206ENST00000520878 ARFIP2P53365 341 aa11.69□□□□□ -0.54
CLK4-206ENST00000520878 DDR2Q16832 855 aa11.69□□□□□ -0.54
CLK4-206ENST00000520878 MGAT5BQ3V5L5 792 aa11.69□□□□□ -0.54
CLK4-206ENST00000520878 FAM72AQ5TYM5 149 aa11.69□□□□□ -0.54
CLK4-206ENST00000520878 FAM72DQ6L9T8 149 aa11.69□□□□□ -0.54
CLK4-206ENST00000520878 UNC5AQ6ZN44 842 aa11.69□□□□□ -0.54
CLK4-206ENST00000520878 ZCCHC23Q6ZST2 131 aa11.69□□□□□ -0.54
CLK4-206ENST00000520878 TFAP2DQ7Z6R9 452 aa11.69□□□□□ -0.54
CLK4-206ENST00000520878 FAM72BQ86X60 149 aa11.69□□□□□ -0.54
CLK4-206ENST00000520878 TMEM86AQ8N2M4 240 aa11.69□□□□□ -0.54
CLK4-206ENST00000520878 SCYL1Q96KG9 808 aa11.69□□□□□ -0.54
CLK4-206ENST00000520878 MECRQ9BV79 373 aa11.69□□□□□ -0.54
CLK4-206ENST00000520878 DMAP1Q9NPF5 467 aaPredicted RBP11.69□□□□□ -0.54
CLK4-206ENST00000520878 STARD7Q9NQZ5 370 aa11.69□□□□□ -0.54
CLK4-206ENST00000520878 CDH9Q9ULB4 789 aa11.69□□□□□ -0.54
CLK4-206ENST00000520878 FNDC3AQ9Y2H6 1198 aaKnown RBP11.69□□□□□ -0.54
CLK4-206ENST00000520878 GIT1Q9Y2X7 761 aa11.69□□□□□ -0.54
CLK4-206ENST00000520878 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.69□□□□□ -0.54
CLK4-206ENST00000520878 ARHGAP42A6NI28 874 aa11.69□□□□□ -0.54
CLK4-206ENST00000520878 C2CD2LO14523 706 aa11.69□□□□□ -0.54
CLK4-206ENST00000520878 DAB1O75553 588 aa11.69□□□□□ -0.54
CLK4-206ENST00000520878 ITIH4Q14624 930 aa11.69□□□□□ -0.54
CLK4-206ENST00000520878 NCBP2-AS2Q69YL0 99 aa11.69□□□□□ -0.54
CLK4-206ENST00000520878 GSDMBQ8TAX9 411 aa11.69□□□□□ -0.54
CLK4-206ENST00000520878 PABPC5Q96DU9 382 aaKnown RBP11.69□□□□□ -0.54
CLK4-206ENST00000520878 SRPK1Q96SB4 655 aaKnown RBP11.69□□□□□ -0.54
CLK4-206ENST00000520878 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.69□□□□□ -0.546e-6■■□□□ 12.1
CLK4-206ENST00000520878 ZFP69BQ9UJL9 534 aa11.69□□□□□ -0.54
CLK4-206ENST00000520878 G3BP2Q9UN86 482 aaKnown RBP11.69□□□□□ -0.54
CLK4-206ENST00000520878 BCLAF3A2AJT9 711 aaKnown RBP11.69□□□□□ -0.54
CLK4-206ENST00000520878 DPYSL4O14531 572 aa11.69□□□□□ -0.54
CLK4-206ENST00000520878 SPAG6O75602 509 aa11.69□□□□□ -0.54
CLK4-206ENST00000520878 SERPINB6P35237 376 aa11.69□□□□□ -0.54
CLK4-206ENST00000520878 CACNA2D1P54289 1103 aa11.69□□□□□ -0.54
CLK4-206ENST00000520878 DAOAP59103 153 aa11.69□□□□□ -0.54
CLK4-206ENST00000520878 CHI3L2Q15782 390 aa11.69□□□□□ -0.54
CLK4-206ENST00000520878 SNCBQ16143 134 aa11.69□□□□□ -0.54
CLK4-206ENST00000520878 CFAP157Q5JU67 520 aa11.69□□□□□ -0.54
CLK4-206ENST00000520878 ALKAL1Q6UXT8 129 aa11.69□□□□□ -0.54
CLK4-206ENST00000520878 ALKBH8Q96BT7 664 aaKnown RBP11.69□□□□□ -0.54
CLK4-206ENST00000520878 B3GALT6Q96L58 329 aa11.69□□□□□ -0.54
CLK4-206ENST00000520878 RMDN2Q96LZ7 410 aa11.69□□□□□ -0.54
CLK4-206ENST00000520878 COLEC11Q9BWP8 271 aa11.69□□□□□ -0.54
CLK4-206ENST00000520878 HAO1Q9UJM8 370 aa11.69□□□□□ -0.54
CLK4-206ENST00000520878 FZD10Q9ULW2 581 aa11.69□□□□□ -0.54
CLK4-206ENST00000520878 SRRM3A6NNA2 597 aaPredicted RBP11.68□□□□□ -0.54
CLK4-206ENST00000520878 HAS3O00219 553 aa11.68□□□□□ -0.54
CLK4-206ENST00000520878 PKDCCQ504Y2 493 aa11.68□□□□□ -0.54
CLK4-206ENST00000520878 GRAMD1AQ96CP6 724 aa11.68□□□□□ -0.54
CLK4-206ENST00000520878 SERAC1Q96JX3 654 aa11.68□□□□□ -0.54
CLK4-206ENST00000520878 PPARGC1AQ9UBK2 798 aaKnown RBP11.68□□□□□ -0.54
CLK4-206ENST00000520878 USH1CQ9Y6N9 552 aa11.68□□□□□ -0.54
CLK4-206ENST00000520878 POLBP06746 335 aa11.68□□□□□ -0.54
CLK4-206ENST00000520878 MX2P20592 715 aa11.68□□□□□ -0.54
CLK4-206ENST00000520878 FDFT1P37268 417 aa11.68□□□□□ -0.54
CLK4-206ENST00000520878 EFEMP1Q12805 493 aa11.68□□□□□ -0.54
CLK4-206ENST00000520878 FAM171A1Q5VUB5 890 aa11.68□□□□□ -0.54
CLK4-206ENST00000520878 SLC9A4Q6AI14 798 aa11.68□□□□□ -0.54
CLK4-206ENST00000520878 KIAA1841Q6NSI8 718 aa11.68□□□□□ -0.54
CLK4-206ENST00000520878 ARID3BQ8IVW6 561 aaPredicted RBP11.68□□□□□ -0.54
CLK4-206ENST00000520878 ATPAF2Q8N5M1 289 aa11.68□□□□□ -0.54
CLK4-206ENST00000520878 SLC25A41Q8N5S1 370 aa11.68□□□□□ -0.54
CLK4-206ENST00000520878 PPP1R10Q96QC0 940 aaKnown RBP11.68□□□□□ -0.54
CLK4-206ENST00000520878 EBNA1BP2Q99848 306 aaKnown RBP11.68□□□□□ -0.54
CLK4-206ENST00000520878 UNKQ9C0B0 810 aaKnown RBP11.68□□□□□ -0.54
CLK4-206ENST00000520878 PPCSQ9HAB8 311 aa11.68□□□□□ -0.54
CLK4-206ENST00000520878 CNGB3Q9NQW8 809 aa11.68□□□□□ -0.54
CLK4-206ENST00000520878 C20orf96Q9NUD7 363 aaPredicted RBP11.68□□□□□ -0.54
CLK4-206ENST00000520878 SLC27A5Q9Y2P5 690 aa11.68□□□□□ -0.54
CLK4-206ENST00000520878 ACTL7BQ9Y614 415 aa11.68□□□□□ -0.54
CLK4-206ENST00000520878 ITGB1P05556 798 aa11.68□□□□□ -0.54
CLK4-206ENST00000520878 HOXD8P13378 290 aaPredicted RBP11.68□□□□□ -0.54
CLK4-206ENST00000520878 PBX3P40426 434 aa11.68□□□□□ -0.54
CLK4-206ENST00000520878 MTFR1Q15390 333 aa11.68□□□□□ -0.54
CLK4-206ENST00000520878 KIAA0319Q5VV43 1072 aa11.68□□□□□ -0.54
CLK4-206ENST00000520878 ADGRD1Q6QNK2 874 aa11.68□□□□□ -0.54
CLK4-206ENST00000520878 MCUR1Q96AQ8 359 aa11.68□□□□□ -0.54
CLK4-206ENST00000520878 TMEM237Q96Q45 408 aa11.68□□□□□ -0.54
CLK4-206ENST00000520878 FSD1LQ9BXM9 530 aa11.68□□□□□ -0.54
CLK4-206ENST00000520878 KDM4CQ9H3R0 1056 aa11.68□□□□□ -0.54
CLK4-206ENST00000520878 TCEA3O75764 348 aa11.67□□□□□ -0.54
CLK4-206ENST00000520878 F9P00740 461 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms