RNA–Protein interactions for RNA: ENST00000520105.5

PTP4A3-203, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-203ENST00000520105 TRAV19A0A0A6YYK7 116 aa22.23■■□□□ 1.15
PTP4A3-203ENST00000520105 KRIT1O00522 736 aa22.23■■□□□ 1.15
PTP4A3-203ENST00000520105 KLKB1P03952 638 aa22.23■■□□□ 1.15
PTP4A3-203ENST00000520105 SRGAP2BP0DMP2 458 aa22.23■■□□□ 1.15
PTP4A3-203ENST00000520105 ARL4AP40617 200 aa22.23■■□□□ 1.15
PTP4A3-203ENST00000520105 DLX2Q07687 328 aaPredicted RBP22.23■■□□□ 1.15
PTP4A3-203ENST00000520105 KLF1Q13351 362 aaPredicted RBP22.23■■□□□ 1.15
PTP4A3-203ENST00000520105 CBX2Q14781 532 aaPredicted RBP22.23■■□□□ 1.15
PTP4A3-203ENST00000520105 PIK3R6Q5UE93 754 aa22.23■■□□□ 1.15
PTP4A3-203ENST00000520105 NUGGCQ68CJ6 796 aa22.23■■□□□ 1.15
PTP4A3-203ENST00000520105 EP400NLQ6ZTU2 488 aa22.23■■□□□ 1.15
PTP4A3-203ENST00000520105 UNC45BQ8IWX7 931 aa22.23■■□□□ 1.15
PTP4A3-203ENST00000520105 TTC16Q8NEE8 873 aa22.23■■□□□ 1.15
PTP4A3-203ENST00000520105 ADAMTS19Q8TE59 1207 aa22.23■■□□□ 1.15
PTP4A3-203ENST00000520105 BTN2A3PQ96KV6 586 aa22.23■■□□□ 1.15
PTP4A3-203ENST00000520105 CSPG4P5Q96PW8 444 aa22.23■■□□□ 1.15
PTP4A3-203ENST00000520105 NAP1L3Q99457 506 aaPredicted RBP22.23■■□□□ 1.15
PTP4A3-203ENST00000520105 MAK16Q9BXY0 300 aaKnown RBP22.23■■□□□ 1.15
PTP4A3-203ENST00000520105 SLITRK6Q9H5Y7 841 aa22.23■■□□□ 1.15
PTP4A3-203ENST00000520105 CTAGE15A4D2H0 777 aa22.22■■□□□ 1.15
PTP4A3-203ENST00000520105 ZNF197O14709 1029 aa22.22■■□□□ 1.15
PTP4A3-203ENST00000520105 CST8O60676 142 aa22.22■■□□□ 1.15
PTP4A3-203ENST00000520105 LRIG2O94898 1065 aa22.22■■□□□ 1.15
PTP4A3-203ENST00000520105 TJP3O95049 919 aa22.22■■□□□ 1.15
PTP4A3-203ENST00000520105 CTAGE8P0CG41 777 aa22.22■■□□□ 1.15
PTP4A3-203ENST00000520105 CEBPBP17676 345 aa22.22■■□□□ 1.15
PTP4A3-203ENST00000520105 HARS2P49590 506 aaKnown RBP22.22■■□□□ 1.15
PTP4A3-203ENST00000520105 MLLT6P55198 1093 aaPredicted RBP22.22■■□□□ 1.15
PTP4A3-203ENST00000520105 C2orf54Q08AI8 447 aa22.22■■□□□ 1.15
PTP4A3-203ENST00000520105 SIX1Q15475 284 aaPredicted RBP22.22■■□□□ 1.15
PTP4A3-203ENST00000520105 ARHGAP15Q53QZ3 475 aa22.22■■□□□ 1.15
PTP4A3-203ENST00000520105 GPR149Q86SP6 731 aa22.22■■□□□ 1.15
PTP4A3-203ENST00000520105 CTAGE6Q86UF2 777 aa22.22■■□□□ 1.15
PTP4A3-203ENST00000520105 CTAGE4Q8IX94 777 aa22.22■■□□□ 1.15
PTP4A3-203ENST00000520105 PQLC3Q8N755 202 aa22.22■■□□□ 1.15
PTP4A3-203ENST00000520105 FAF2Q96CS3 445 aa22.22■■□□□ 1.15
PTP4A3-203ENST00000520105 TASP1Q9H6P5 420 aa22.22■■□□□ 1.15
PTP4A3-203ENST00000520105 RBM12Q9NTZ6 932 aaKnown RBP22.22■■□□□ 1.15
PTP4A3-203ENST00000520105 CLEC1BQ9P126 229 aa22.22■■□□□ 1.15
PTP4A3-203ENST00000520105 EEF2KO00418 725 aaKnown RBP22.22■■□□□ 1.15
PTP4A3-203ENST00000520105 SCAMP3O14828 347 aaKnown RBP22.22■■□□□ 1.15
PTP4A3-203ENST00000520105 POU3F3P20264 500 aaPredicted RBP22.22■■□□□ 1.15
PTP4A3-203ENST00000520105 AMPD1P23109 780 aa22.22■■□□□ 1.15
PTP4A3-203ENST00000520105 SLC7A9P82251 487 aa22.22■■□□□ 1.15
PTP4A3-203ENST00000520105 MS4A13Q5J8X5 152 aa22.22■■□□□ 1.15
PTP4A3-203ENST00000520105 ZNF572Q7Z3I7 529 aaPredicted RBP22.22■■□□□ 1.15
PTP4A3-203ENST00000520105 C14orf80Q86SX3 495 aa22.22■■□□□ 1.15
PTP4A3-203ENST00000520105 DENND1CQ8IV53 801 aa22.22■■□□□ 1.15
PTP4A3-203ENST00000520105 CMTM8Q8IZV2 173 aa22.22■■□□□ 1.15
PTP4A3-203ENST00000520105 MICALL1Q8N3F8 863 aa22.22■■□□□ 1.15
PTP4A3-203ENST00000520105 MNS1Q8NEH6 495 aa22.22■■□□□ 1.15
PTP4A3-203ENST00000520105 PLD4Q96BZ4 506 aa22.22■■□□□ 1.15
PTP4A3-203ENST00000520105 ZSWIM3Q96MP5 696 aa22.22■■□□□ 1.15
PTP4A3-203ENST00000520105 SAE1Q9UBE0 346 aaPredicted RBP22.22■■□□□ 1.15
PTP4A3-203ENST00000520105 EFR3BQ9Y2G0 817 aa22.22■■□□□ 1.15
PTP4A3-203ENST00000520105 GOLGA6L7A0A1B0GV03 622 aa22.21■■□□□ 1.15
PTP4A3-203ENST00000520105 SLU7O95391 586 aaKnown RBP22.21■■□□□ 1.15
PTP4A3-203ENST00000520105 CORO1AP31146 461 aaKnown RBP22.21■■□□□ 1.15
PTP4A3-203ENST00000520105 VSIG1Q86XK7 387 aa22.21■■□□□ 1.15
PTP4A3-203ENST00000520105 HAUS1Q96CS2 278 aa22.21■■□□□ 1.15
PTP4A3-203ENST00000520105 C1orf74Q96LT6 269 aa22.21■■□□□ 1.15
PTP4A3-203ENST00000520105 FAM118BQ9BPY3 351 aa22.21■■□□□ 1.15
PTP4A3-203ENST00000520105 CLDND1Q9NY35 253 aa22.21■■□□□ 1.15
PTP4A3-203ENST00000520105 R3HDM2Q9Y2K5 976 aaKnown RBP22.21■■□□□ 1.15
PTP4A3-203ENST00000520105 BRWD1Q9NSI6 2320 aa22.21■■□□□ 1.15
PTP4A3-203ENST00000520105 H3BRJ5 948 aa22.2■■□□□ 1.14
PTP4A3-203ENST00000520105 TBX10O75333 385 aa22.2■■□□□ 1.14
PTP4A3-203ENST00000520105 DDX6P26196 483 aaKnown RBP eCLIP22.2■■□□□ 1.143e-6■■■■□ 26.7
PTP4A3-203ENST00000520105 AVPR1AP37288 418 aa22.2■■□□□ 1.14
PTP4A3-203ENST00000520105 TPI1P60174 286 aa22.2■■□□□ 1.14
PTP4A3-203ENST00000520105 CLUL1Q15846 466 aa22.2■■□□□ 1.14
PTP4A3-203ENST00000520105 CTC1Q2NKJ3 1217 aa22.2■■□□□ 1.14
PTP4A3-203ENST00000520105 ARTNQ5T4W7 220 aa22.2■■□□□ 1.14
PTP4A3-203ENST00000520105 NADSYN1Q6IA69 706 aa22.2■■□□□ 1.14
PTP4A3-203ENST00000520105 RFX8Q6ZV50 586 aa22.2■■□□□ 1.14
PTP4A3-203ENST00000520105 BBS12Q6ZW61 710 aa22.2■■□□□ 1.14
PTP4A3-203ENST00000520105 PRELID2Q8N945 189 aa22.2■■□□□ 1.14
PTP4A3-203ENST00000520105 EPAS1Q99814 870 aa22.2■■□□□ 1.14
PTP4A3-203ENST00000520105 ETNK2Q9NVF9 386 aa22.2■■□□□ 1.14
PTP4A3-203ENST00000520105 RCOR3Q9P2K3 495 aaPredicted RBP22.2■■□□□ 1.14
PTP4A3-203ENST00000520105 CCL26Q9Y258 94 aa22.2■■□□□ 1.14
PTP4A3-203ENST00000520105 ZNF487B1APH4 448 aa22.2■■□□□ 1.14
PTP4A3-203ENST00000520105 DAPK3O43293 454 aa22.2■■□□□ 1.14
PTP4A3-203ENST00000520105 PFKLP17858 780 aa22.2■■□□□ 1.14
PTP4A3-203ENST00000520105 AUHQ13825 339 aaKnown RBP22.2■■□□□ 1.14
PTP4A3-203ENST00000520105 RAP1GAP2Q684P5 730 aa22.2■■□□□ 1.14
PTP4A3-203ENST00000520105 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.2■■□□□ 1.14
PTP4A3-203ENST00000520105 C1orf54Q8WWF1 131 aa22.2■■□□□ 1.14
PTP4A3-203ENST00000520105 ARHGEF4Q9NR80 690 aa22.2■■□□□ 1.14
PTP4A3-203ENST00000520105 AGO1Q9UL18 857 aaKnown RBP22.2■■□□□ 1.14
PTP4A3-203ENST00000520105 VANGL2Q9ULK5 521 aa22.2■■□□□ 1.14
PTP4A3-203ENST00000520105 MFHAS1Q9Y4C4 1052 aa22.2■■□□□ 1.14
PTP4A3-203ENST00000520105 ACSL4O60488 711 aa22.19■■□□□ 1.14
PTP4A3-203ENST00000520105 GREM1O60565 184 aa22.19■■□□□ 1.14
PTP4A3-203ENST00000520105 HOXB8P17481 243 aaPredicted RBP22.19■■□□□ 1.14
PTP4A3-203ENST00000520105 EPHB2P29323 1055 aa22.19■■□□□ 1.14
PTP4A3-203ENST00000520105 LTBRP36941 435 aa22.19■■□□□ 1.14
PTP4A3-203ENST00000520105 DPYSQ14117 519 aa22.19■■□□□ 1.14
PTP4A3-203ENST00000520105 RWDD4Q6NW29 188 aaKnown RBP22.19■■□□□ 1.14
PTP4A3-203ENST00000520105 PLD5Q8N7P1 536 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms