RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 CD99L2Q8TCZ2 262 aa8.69□□□□□ -1.02
HMGB4-203ENST00000519684 LRRC8CQ8TDW0 803 aa8.69□□□□□ -1.02
HMGB4-203ENST00000519684 SLC44A1Q8WWI5 657 aa8.69□□□□□ -1.02
HMGB4-203ENST00000519684 GRAMD1AQ96CP6 724 aa8.69□□□□□ -1.02
HMGB4-203ENST00000519684 P2RY11Q96G91 374 aa8.69□□□□□ -1.02
HMGB4-203ENST00000519684 KDM4CQ9H3R0 1056 aa8.69□□□□□ -1.02
HMGB4-203ENST00000519684 WDR6Q9NNW5 1121 aaKnown RBP8.69□□□□□ -1.02
HMGB4-203ENST00000519684 EIF2B3Q9NR50 452 aaKnown RBP8.69□□□□□ -1.02
HMGB4-203ENST00000519684 RGS18Q9NS28 235 aa8.69□□□□□ -1.02
HMGB4-203ENST00000519684 TMEM30AQ9NV96 361 aa8.69□□□□□ -1.02
HMGB4-203ENST00000519684 TTLL3Q9Y4R7 772 aa8.69□□□□□ -1.02
HMGB4-203ENST00000519684 SRCAPQ6ZRS2 3230 aa8.69□□□□□ -1.02
HMGB4-203ENST00000519684 PATJQ8NI35 1801 aa8.69□□□□□ -1.02
HMGB4-203ENST00000519684 CCT8L1PA6NM43 557 aa8.69□□□□□ -1.02
HMGB4-203ENST00000519684 H0YHG0 523 aa8.69□□□□□ -1.02
HMGB4-203ENST00000519684 DCLK1O15075 740 aa8.69□□□□□ -1.02
HMGB4-203ENST00000519684 TM9SF1O15321 606 aa8.69□□□□□ -1.02
HMGB4-203ENST00000519684 INPPL1O15357 1258 aa8.69□□□□□ -1.02
HMGB4-203ENST00000519684 NCAM2O15394 837 aa8.69□□□□□ -1.02
HMGB4-203ENST00000519684 KRT37O76014 449 aa8.69□□□□□ -1.02
HMGB4-203ENST00000519684 ASMTLO95671 621 aa8.69□□□□□ -1.02
HMGB4-203ENST00000519684 ERCC2P18074 760 aa8.69□□□□□ -1.02
HMGB4-203ENST00000519684 SERPINB6P35237 376 aa8.69□□□□□ -1.02
HMGB4-203ENST00000519684 WDR4P57081 412 aaKnown RBP8.69□□□□□ -1.02
HMGB4-203ENST00000519684 YWHAHQ04917 246 aaPredicted RBP8.69□□□□□ -1.02
HMGB4-203ENST00000519684 FAM182AQ5T1J6 154 aa8.69□□□□□ -1.02
HMGB4-203ENST00000519684 MAP3K21Q5TCX8 1036 aa8.69□□□□□ -1.02
HMGB4-203ENST00000519684 TTC39BQ5VTQ0 682 aaPredicted RBP8.69□□□□□ -1.02
HMGB4-203ENST00000519684 BSPRYQ5W0U4 402 aa8.69□□□□□ -1.02
HMGB4-203ENST00000519684 PM20D1Q6GTS8 502 aa8.69□□□□□ -1.02
HMGB4-203ENST00000519684 SLC24A5Q71RS6 500 aa8.69□□□□□ -1.02
HMGB4-203ENST00000519684 PPM1NQ8N819 430 aa8.69□□□□□ -1.02
HMGB4-203ENST00000519684 GSDMBQ8TAX9 411 aa8.69□□□□□ -1.02
HMGB4-203ENST00000519684 DENND1AQ8TEH3 1009 aa8.69□□□□□ -1.02
HMGB4-203ENST00000519684 CAPNS2Q96L46 248 aa8.69□□□□□ -1.02
HMGB4-203ENST00000519684 FAM193BQ96PV7 902 aaPredicted RBP8.69□□□□□ -1.02
HMGB4-203ENST00000519684 EBNA1BP2Q99848 306 aaKnown RBP8.69□□□□□ -1.02
HMGB4-203ENST00000519684 TSEN34Q9BSV6 310 aaKnown RBP8.69□□□□□ -1.02
HMGB4-203ENST00000519684 COLEC11Q9BWP8 271 aa8.69□□□□□ -1.02
HMGB4-203ENST00000519684 BRD8Q9H0E9 1235 aa8.69□□□□□ -1.02
HMGB4-203ENST00000519684 PRDM12Q9H4Q4 367 aa8.69□□□□□ -1.02
HMGB4-203ENST00000519684 F5H423 210 aaPredicted RBP8.68□□□□□ -1.02
HMGB4-203ENST00000519684 MTSS1O43312 755 aa8.68□□□□□ -1.02
HMGB4-203ENST00000519684 TYROBPO43914 113 aa8.68□□□□□ -1.02
HMGB4-203ENST00000519684 PIAS1O75925 651 aa8.68□□□□□ -1.02
HMGB4-203ENST00000519684 FSBPO95073 299 aa8.68□□□□□ -1.02
HMGB4-203ENST00000519684 APOEP02649 317 aa8.68□□□□□ -1.02
HMGB4-203ENST00000519684 MLNP12872 115 aa8.68□□□□□ -1.02
HMGB4-203ENST00000519684 TAC1P20366 129 aa8.68□□□□□ -1.02
HMGB4-203ENST00000519684 MX2P20592 715 aa8.68□□□□□ -1.02
HMGB4-203ENST00000519684 GRIK1P39086 918 aa8.68□□□□□ -1.02
HMGB4-203ENST00000519684 MAGEA3P43357 314 aa8.68□□□□□ -1.02
HMGB4-203ENST00000519684 CXCR3P49682 368 aa8.68□□□□□ -1.02
HMGB4-203ENST00000519684 CAP1Q01518 475 aa8.68□□□□□ -1.02
HMGB4-203ENST00000519684 PARP6Q2NL67 630 aa8.68□□□□□ -1.02
HMGB4-203ENST00000519684 NOMO2Q5JPE7 1267 aa8.68□□□□□ -1.02
HMGB4-203ENST00000519684 CASC4Q6P4E1 433 aa8.68□□□□□ -1.02
HMGB4-203ENST00000519684 LVRNQ6Q4G3 990 aa8.68□□□□□ -1.02
HMGB4-203ENST00000519684 CD300LGQ6UXG3 332 aa8.68□□□□□ -1.02
HMGB4-203ENST00000519684 CTU1Q7Z7A3 348 aaKnown RBP8.68□□□□□ -1.02
HMGB4-203ENST00000519684 TAC4Q86UU9 113 aa8.68□□□□□ -1.02
HMGB4-203ENST00000519684 LRRC6Q86X45 466 aa8.68□□□□□ -1.02
HMGB4-203ENST00000519684 OR10T2Q8NGX3 314 aa8.68□□□□□ -1.02
HMGB4-203ENST00000519684 TMEM209Q96SK2 561 aa8.68□□□□□ -1.02
HMGB4-203ENST00000519684 PKMYT1Q99640 499 aa8.68□□□□□ -1.02
HMGB4-203ENST00000519684 PITPNM3Q9BZ71 974 aa8.68□□□□□ -1.02
HMGB4-203ENST00000519684 TKTL2Q9H0I9 626 aa8.68□□□□□ -1.02
HMGB4-203ENST00000519684 TRPV6Q9H1D0 765 aa8.68□□□□□ -1.02
HMGB4-203ENST00000519684 TMLHEQ9NVH6 421 aa8.68□□□□□ -1.02
HMGB4-203ENST00000519684 KLHL8Q9P2G9 620 aaPredicted RBP8.68□□□□□ -1.02
HMGB4-203ENST00000519684 KANSL3Q9P2N6 904 aa8.68□□□□□ -1.02
HMGB4-203ENST00000519684 ARL2BPQ9Y2Y0 163 aa8.68□□□□□ -1.02
HMGB4-203ENST00000519684 PCDHA11Q9Y5I1 949 aa8.68□□□□□ -1.02
HMGB4-203ENST00000519684 CAPN7Q9Y6W3 813 aa8.68□□□□□ -1.02
HMGB4-203ENST00000519684 ZNF638Q14966 1978 aaKnown RBP8.68□□□□□ -1.02
HMGB4-203ENST00000519684 FAM72CH0Y354 149 aa8.68□□□□□ -1.02
HMGB4-203ENST00000519684 LPXNO60711 386 aa8.68□□□□□ -1.02
HMGB4-203ENST00000519684 OAS1P00973 400 aaKnown RBP8.68□□□□□ -1.02
HMGB4-203ENST00000519684 PRKCHP24723 683 aa8.68□□□□□ -1.02
HMGB4-203ENST00000519684 FOXN2P32314 431 aa8.68□□□□□ -1.02
HMGB4-203ENST00000519684 CYP2C18P33260 490 aa8.68□□□□□ -1.02
HMGB4-203ENST00000519684 ACTN3Q08043 901 aaPredicted RBP8.68□□□□□ -1.02
HMGB4-203ENST00000519684 FAAP100Q0VG06 881 aa8.68□□□□□ -1.02
HMGB4-203ENST00000519684 SEMA3BQ13214 749 aa8.68□□□□□ -1.02
HMGB4-203ENST00000519684 MTFR1Q15390 333 aa8.68□□□□□ -1.02
HMGB4-203ENST00000519684 PDK4Q16654 411 aa8.68□□□□□ -1.02
HMGB4-203ENST00000519684 DEFB115Q30KQ5 88 aa8.68□□□□□ -1.02
HMGB4-203ENST00000519684 FAM72AQ5TYM5 149 aa8.68□□□□□ -1.02
HMGB4-203ENST00000519684 BTBD8Q5XKL5 378 aa8.68□□□□□ -1.02
HMGB4-203ENST00000519684 FAM72DQ6L9T8 149 aa8.68□□□□□ -1.02
HMGB4-203ENST00000519684 UNC5AQ6ZN44 842 aa8.68□□□□□ -1.02
HMGB4-203ENST00000519684 ZNF534Q76KX8 674 aa8.68□□□□□ -1.02
HMGB4-203ENST00000519684 BHLHA9Q7RTU4 235 aa8.68□□□□□ -1.02
HMGB4-203ENST00000519684 PID1Q7Z2X4 250 aa8.68□□□□□ -1.02
HMGB4-203ENST00000519684 FAM72BQ86X60 149 aa8.68□□□□□ -1.02
HMGB4-203ENST00000519684 DCP1BQ8IZD4 617 aaKnown RBP8.68□□□□□ -1.02
HMGB4-203ENST00000519684 AGGF1Q8N302 714 aaeCLIP8.68□□□□□ -1.02
HMGB4-203ENST00000519684 PDCD7Q8N8D1 485 aaKnown RBP8.68□□□□□ -1.02
HMGB4-203ENST00000519684 PXYLP1Q8TE99 480 aa8.68□□□□□ -1.02
HMGB4-203ENST00000519684 MZB1Q8WU39 189 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms