RNA–Protein interactions for RNA: ENST00000519362.5

SPIDR-210, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,807 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-210ENST00000519362 RNF180Q86T96 592 aa12.76□□□□□ -0.37
SPIDR-210ENST00000519362 LRRTM3Q86VH5 581 aa12.76□□□□□ -0.37
SPIDR-210ENST00000519362 GRAMD1AQ96CP6 724 aa12.76□□□□□ -0.37
SPIDR-210ENST00000519362 CFAP36Q96G28 342 aa12.76□□□□□ -0.37
SPIDR-210ENST00000519362 SUSD3Q96L08 255 aa12.76□□□□□ -0.37
SPIDR-210ENST00000519362 EBNA1BP2Q99848 306 aaKnown RBP12.76□□□□□ -0.37
SPIDR-210ENST00000519362 COLEC11Q9BWP8 271 aa12.76□□□□□ -0.37
SPIDR-210ENST00000519362 PRDM12Q9H4Q4 367 aa12.76□□□□□ -0.37
SPIDR-210ENST00000519362 EIF2B3Q9NR50 452 aaKnown RBP12.76□□□□□ -0.37
SPIDR-210ENST00000519362 DDIT4Q9NX09 232 aa12.76□□□□□ -0.37
SPIDR-210ENST00000519362 ZNF180Q9UJW8 692 aa12.76□□□□□ -0.37
SPIDR-210ENST00000519362 NOD1Q9Y239 953 aa12.76□□□□□ -0.37
SPIDR-210ENST00000519362 RAD54BQ9Y620 910 aa12.76□□□□□ -0.37
SPIDR-210ENST00000519362 RNF103O00237 685 aa12.76□□□□□ -0.37
SPIDR-210ENST00000519362 PPP1R12AO14974 1030 aaPredicted RBP12.76□□□□□ -0.37
SPIDR-210ENST00000519362 TM9SF1O15321 606 aa12.76□□□□□ -0.37
SPIDR-210ENST00000519362 SUN1O94901 812 aa12.76□□□□□ -0.37
SPIDR-210ENST00000519362 APOEP02649 317 aa12.76□□□□□ -0.37
SPIDR-210ENST00000519362 INHBAP08476 426 aa12.76□□□□□ -0.37
SPIDR-210ENST00000519362 ERCC2P18074 760 aa12.76□□□□□ -0.37
SPIDR-210ENST00000519362 GRIA1P42261 906 aa12.76□□□□□ -0.37
SPIDR-210ENST00000519362 SLC18A2Q05940 514 aa12.76□□□□□ -0.37
SPIDR-210ENST00000519362 FAAP100Q0VG06 881 aa12.76□□□□□ -0.37
SPIDR-210ENST00000519362 AP1B1Q10567 949 aa12.76□□□□□ -0.37
SPIDR-210ENST00000519362 SF3A3Q12874 501 aaKnown RBP eCLIP12.76□□□□□ -0.379e-19■■■■■ 36
SPIDR-210ENST00000519362 ZKSCAN8Q15776 578 aaPredicted RBP12.76□□□□□ -0.37
SPIDR-210ENST00000519362 OVOS1Q6IE37 1185 aa12.76□□□□□ -0.37
SPIDR-210ENST00000519362 TRAF7Q6Q0C0 670 aa12.76□□□□□ -0.37
SPIDR-210ENST00000519362 LVRNQ6Q4G3 990 aa12.76□□□□□ -0.37
SPIDR-210ENST00000519362 UNC5AQ6ZN44 842 aa12.76□□□□□ -0.37
SPIDR-210ENST00000519362 DENND5BQ6ZUT9 1274 aa12.76□□□□□ -0.37
SPIDR-210ENST00000519362 TRPM8Q7Z2W7 1104 aa12.76□□□□□ -0.37
SPIDR-210ENST00000519362 SLC26A11Q86WA9 606 aa12.76□□□□□ -0.37
SPIDR-210ENST00000519362 LRRC6Q86X45 466 aa12.76□□□□□ -0.37
SPIDR-210ENST00000519362 MPP5Q8N3R9 675 aa12.76□□□□□ -0.37
SPIDR-210ENST00000519362 ZNF276Q8N554 614 aa12.76□□□□□ -0.37
SPIDR-210ENST00000519362 COLGALT1Q8NBJ5 622 aa12.76□□□□□ -0.37
SPIDR-210ENST00000519362 NETO2Q8NC67 525 aa12.76□□□□□ -0.37
SPIDR-210ENST00000519362 HASPINQ8TF76 798 aa12.76□□□□□ -0.37
SPIDR-210ENST00000519362 TMEM209Q96SK2 561 aa12.76□□□□□ -0.37
SPIDR-210ENST00000519362 PAIP2Q9BPZ3 127 aaKnown RBP12.76□□□□□ -0.37
SPIDR-210ENST00000519362 DMAP1Q9NPF5 467 aaPredicted RBP12.76□□□□□ -0.37
SPIDR-210ENST00000519362 RGS18Q9NS28 235 aa12.76□□□□□ -0.37
SPIDR-210ENST00000519362 INPP5FQ9Y2H2 1132 aa12.76□□□□□ -0.37
SPIDR-210ENST00000519362 IKBKGQ9Y6K9 419 aa12.76□□□□□ -0.37
SPIDR-210ENST00000519362 CAPN7Q9Y6W3 813 aa12.76□□□□□ -0.37
SPIDR-210ENST00000519362 ZNF638Q14966 1978 aaKnown RBP12.75□□□□□ -0.37
SPIDR-210ENST00000519362 CXorf49A8MYA2 514 aaPredicted RBP12.75□□□□□ -0.37
SPIDR-210ENST00000519362 ZNF189O75820 626 aaPredicted RBP12.75□□□□□ -0.37
SPIDR-210ENST00000519362 STK10O94804 968 aaKnown RBP12.75□□□□□ -0.37
SPIDR-210ENST00000519362 CKBP12277 381 aa12.75□□□□□ -0.37
SPIDR-210ENST00000519362 TYMPP19971 482 aa12.75□□□□□ -0.37
SPIDR-210ENST00000519362 GBP2P32456 591 aaPredicted RBP12.75□□□□□ -0.37
SPIDR-210ENST00000519362 SCTRP47872 440 aa12.75□□□□□ -0.37
SPIDR-210ENST00000519362 ZNF135P52742 658 aaPredicted RBP12.75□□□□□ -0.37
SPIDR-210ENST00000519362 SARNPP82979 210 aaKnown RBP12.75□□□□□ -0.37
SPIDR-210ENST00000519362 NOGQ13253 232 aa12.75□□□□□ -0.37
SPIDR-210ENST00000519362 EIF4EBP2Q13542 120 aaPredicted RBP12.75□□□□□ -0.37
SPIDR-210ENST00000519362 MAPRE1Q15691 268 aaKnown RBP12.75□□□□□ -0.37
SPIDR-210ENST00000519362 ARL13BQ3SXY8 428 aa12.75□□□□□ -0.37
SPIDR-210ENST00000519362 BSPRYQ5W0U4 402 aa12.75□□□□□ -0.37
SPIDR-210ENST00000519362 PAXIP1Q6ZW49 1069 aaPredicted RBP12.75□□□□□ -0.37
SPIDR-210ENST00000519362 CYS1Q717R9 158 aa12.75□□□□□ -0.37
SPIDR-210ENST00000519362 BEND5Q7L4P6 421 aa12.75□□□□□ -0.37
SPIDR-210ENST00000519362 RTN4RL1Q86UN2 441 aaPredicted RBP12.75□□□□□ -0.37
SPIDR-210ENST00000519362 TP53INP2Q8IXH6 220 aa12.75□□□□□ -0.37
SPIDR-210ENST00000519362 GSDMBQ8TAX9 411 aa12.75□□□□□ -0.37
SPIDR-210ENST00000519362 TCP10LQ8TDR4 215 aa12.75□□□□□ -0.37
SPIDR-210ENST00000519362 EDEM1Q92611 657 aa12.75□□□□□ -0.37
SPIDR-210ENST00000519362 SERAC1Q96JX3 654 aa12.75□□□□□ -0.37
SPIDR-210ENST00000519362 PITPNM3Q9BZ71 974 aa12.75□□□□□ -0.37
SPIDR-210ENST00000519362 SMYD2Q9NRG4 433 aa12.75□□□□□ -0.37
SPIDR-210ENST00000519362 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.75□□□□□ -0.37
SPIDR-210ENST00000519362 SRRDQ9UH36 339 aa12.75□□□□□ -0.37
SPIDR-210ENST00000519362 FRMPD3Q5JV73 1810 aa12.75□□□□□ -0.37
SPIDR-210ENST00000519362 HTTP42858 3142 aa12.75□□□□□ -0.37
SPIDR-210ENST00000519362 NLRC5Q86WI3 1866 aa12.75□□□□□ -0.37
SPIDR-210ENST00000519362 ARHGEF37A1IGU5 675 aa12.74□□□□□ -0.37
SPIDR-210ENST00000519362 FAM159BA6NKW6 160 aa12.74□□□□□ -0.37
SPIDR-210ENST00000519362 F8W810 466 aa12.74□□□□□ -0.37
SPIDR-210ENST00000519362 IGLV3-25P01717 112 aa12.74□□□□□ -0.37
SPIDR-210ENST00000519362 MT-ND3P03897 115 aa12.74□□□□□ -0.37
SPIDR-210ENST00000519362 IBSPP21815 317 aaPredicted RBP12.74□□□□□ -0.37
SPIDR-210ENST00000519362 TPI1P60174 286 aa12.74□□□□□ -0.37
SPIDR-210ENST00000519362 DNAJC3Q13217 504 aa12.74□□□□□ -0.37
SPIDR-210ENST00000519362 PARP6Q2NL67 630 aa12.74□□□□□ -0.37
SPIDR-210ENST00000519362 TTC39BQ5VTQ0 682 aaPredicted RBP12.74□□□□□ -0.37
SPIDR-210ENST00000519362 LRRC8BQ6P9F7 803 aa12.74□□□□□ -0.37
SPIDR-210ENST00000519362 ZNF567Q8N184 647 aa12.74□□□□□ -0.37
SPIDR-210ENST00000519362 THEM5Q8N1Q8 247 aa12.74□□□□□ -0.37
SPIDR-210ENST00000519362 PDCD7Q8N8D1 485 aaKnown RBP12.74□□□□□ -0.37
SPIDR-210ENST00000519362 SPOCK2Q92563 424 aa12.74□□□□□ -0.37
SPIDR-210ENST00000519362 FERMT1Q9BQL6 677 aa12.74□□□□□ -0.37
SPIDR-210ENST00000519362 WDCPQ9H6R7 721 aa12.74□□□□□ -0.37
SPIDR-210ENST00000519362 MOCS1Q9NZB8 636 aa12.74□□□□□ -0.37
SPIDR-210ENST00000519362 IGSF9Q9P2J2 1179 aa12.74□□□□□ -0.37
SPIDR-210ENST00000519362 SLC12A4Q9UP95 1085 aa12.74□□□□□ -0.37
SPIDR-210ENST00000519362 ARL2BPQ9Y2Y0 163 aa12.74□□□□□ -0.37
SPIDR-210ENST00000519362 STARD13Q9Y3M8 1113 aa12.74□□□□□ -0.37
SPIDR-210ENST00000519362 PCDHA11Q9Y5I1 949 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms