RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 IGHV4-34P06331 123 aa11.98□□□□□ -0.49
TRAPPC9-203ENST00000517667 ATP5BP06576 529 aaKnown RBP11.98□□□□□ -0.49
TRAPPC9-203ENST00000517667 HOXD9P28356 352 aaPredicted RBP11.98□□□□□ -0.49
TRAPPC9-203ENST00000517667 HLA-FP30511 346 aa11.98□□□□□ -0.49
TRAPPC9-203ENST00000517667 ARRB1P49407 418 aaPredicted RBP11.98□□□□□ -0.49
TRAPPC9-203ENST00000517667 RPS14P62263 151 aaKnown RBP11.98□□□□□ -0.49
TRAPPC9-203ENST00000517667 EHHADHQ08426 723 aa11.98□□□□□ -0.49
TRAPPC9-203ENST00000517667 DNAJC3Q13217 504 aa11.98□□□□□ -0.49
TRAPPC9-203ENST00000517667 SLC39A14Q15043 492 aa11.98□□□□□ -0.49
TRAPPC9-203ENST00000517667 E2F4Q16254 413 aa11.98□□□□□ -0.49
TRAPPC9-203ENST00000517667 KNOP1Q1ED39 458 aaKnown RBP11.98□□□□□ -0.49
TRAPPC9-203ENST00000517667 KCNT1Q5JUK3 1230 aa11.98□□□□□ -0.49
TRAPPC9-203ENST00000517667 ZNF776Q68DI1 518 aaPredicted RBP11.98□□□□□ -0.49
TRAPPC9-203ENST00000517667 KIAA0895LQ68EN5 471 aa11.98□□□□□ -0.49
TRAPPC9-203ENST00000517667 FBXL19Q6PCT2 694 aa11.98□□□□□ -0.49
TRAPPC9-203ENST00000517667 UNC13DQ70J99 1090 aa11.98□□□□□ -0.49
TRAPPC9-203ENST00000517667 GATAD2AQ86YP4 633 aa11.98□□□□□ -0.49
TRAPPC9-203ENST00000517667 AHI1Q8N157 1196 aa11.98□□□□□ -0.49
TRAPPC9-203ENST00000517667 CACTIN-AS1Q8N1I8 211 aa11.98□□□□□ -0.49
TRAPPC9-203ENST00000517667 PLEKHO2Q8TD55 490 aa11.98□□□□□ -0.49
TRAPPC9-203ENST00000517667 SAP25Q8TEE9 199 aa11.98□□□□□ -0.49
TRAPPC9-203ENST00000517667 TMEM176AQ96HP8 235 aa11.98□□□□□ -0.49
TRAPPC9-203ENST00000517667 IMPG2Q9BZV3 1241 aa11.98□□□□□ -0.49
TRAPPC9-203ENST00000517667 MAGEF1Q9HAY2 307 aa11.98□□□□□ -0.49
TRAPPC9-203ENST00000517667 NYNRINQ9P2P1 1898 aaKnown RBP11.97□□□□□ -0.49
TRAPPC9-203ENST00000517667 MGAQ8IWI9 3026 aa11.97□□□□□ -0.49
TRAPPC9-203ENST00000517667 DLDP09622 509 aaKnown RBP11.97□□□□□ -0.49
TRAPPC9-203ENST00000517667 CD38P28907 300 aa11.97□□□□□ -0.49
TRAPPC9-203ENST00000517667 PIK3CAP42336 1068 aa11.97□□□□□ -0.49
TRAPPC9-203ENST00000517667 HARS2P49590 506 aaKnown RBP11.97□□□□□ -0.49
TRAPPC9-203ENST00000517667 CXADRP78310 365 aa11.97□□□□□ -0.49
TRAPPC9-203ENST00000517667 TLE3Q04726 772 aa11.97□□□□□ -0.49
TRAPPC9-203ENST00000517667 ZACNQ401N2 412 aa11.97□□□□□ -0.49
TRAPPC9-203ENST00000517667 CHST9Q7L1S5 443 aa11.97□□□□□ -0.49
TRAPPC9-203ENST00000517667 ZNF366Q8N895 744 aa11.97□□□□□ -0.49
TRAPPC9-203ENST00000517667 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.97□□□□□ -0.49
TRAPPC9-203ENST00000517667 ZNF557Q8N988 423 aaPredicted RBP11.97□□□□□ -0.49
TRAPPC9-203ENST00000517667 IQUBQ8NA54 791 aa11.97□□□□□ -0.49
TRAPPC9-203ENST00000517667 TMEM174Q8WUU8 243 aa11.97□□□□□ -0.49
TRAPPC9-203ENST00000517667 ELMO3Q96BJ8 720 aa11.97□□□□□ -0.49
TRAPPC9-203ENST00000517667 WBP1Q96G27 269 aa11.97□□□□□ -0.49
TRAPPC9-203ENST00000517667 C7orf25Q9BPX7 421 aa11.97□□□□□ -0.49
TRAPPC9-203ENST00000517667 DUSP16Q9BY84 665 aa11.97□□□□□ -0.49
TRAPPC9-203ENST00000517667 BACH2Q9BYV9 841 aa11.97□□□□□ -0.49
TRAPPC9-203ENST00000517667 PRSS16Q9NQE7 514 aa11.97□□□□□ -0.49
TRAPPC9-203ENST00000517667 GDF3Q9NR23 364 aa11.97□□□□□ -0.49
TRAPPC9-203ENST00000517667 SUN2Q9UH99 717 aa11.97□□□□□ -0.49
TRAPPC9-203ENST00000517667 TPX2Q9ULW0 747 aaKnown RBP11.97□□□□□ -0.49
TRAPPC9-203ENST00000517667 SLC12A8A0AV02 714 aa11.96□□□□□ -0.49
TRAPPC9-203ENST00000517667 LRRC72A6NJI9 287 aa11.96□□□□□ -0.49
TRAPPC9-203ENST00000517667 IKBKBO14920 756 aa11.96□□□□□ -0.49
TRAPPC9-203ENST00000517667 BRINP1O60477 761 aa11.96□□□□□ -0.49
TRAPPC9-203ENST00000517667 RNASEH1O60930 286 aaKnown RBP11.96□□□□□ -0.49
TRAPPC9-203ENST00000517667 KIF20AO95235 890 aa11.96□□□□□ -0.49
TRAPPC9-203ENST00000517667 LATS1O95835 1130 aa11.96□□□□□ -0.49
TRAPPC9-203ENST00000517667 EPHA8P29322 1005 aaPredicted RBP11.96□□□□□ -0.49
TRAPPC9-203ENST00000517667 UCNP55089 124 aa11.96□□□□□ -0.49
TRAPPC9-203ENST00000517667 TBC1D25Q3MII6 688 aa11.96□□□□□ -0.49
TRAPPC9-203ENST00000517667 TAF1BQ53T94 588 aaPredicted RBP11.96□□□□□ -0.49
TRAPPC9-203ENST00000517667 SLC45A4Q5BKX6 768 aa11.96□□□□□ -0.49
TRAPPC9-203ENST00000517667 ADIPOR2Q86V24 386 aa11.96□□□□□ -0.49
TRAPPC9-203ENST00000517667 OXR1Q8N573 874 aa11.96□□□□□ -0.49
TRAPPC9-203ENST00000517667 EID2Q8N6I1 236 aa11.96□□□□□ -0.49
TRAPPC9-203ENST00000517667 GANCQ8TET4 914 aa11.96□□□□□ -0.49
TRAPPC9-203ENST00000517667 CYB5D2Q8WUJ1 264 aa11.96□□□□□ -0.49
TRAPPC9-203ENST00000517667 RFFLQ8WZ73 363 aa11.96□□□□□ -0.49
TRAPPC9-203ENST00000517667 TSC1Q92574 1164 aa11.96□□□□□ -0.49
TRAPPC9-203ENST00000517667 SLC6A18Q96N87 628 aa11.96□□□□□ -0.49
TRAPPC9-203ENST00000517667 TWNKQ96RR1 684 aa11.96□□□□□ -0.49
TRAPPC9-203ENST00000517667 ARID3AQ99856 593 aa11.96□□□□□ -0.49
TRAPPC9-203ENST00000517667 RSPH9Q9H1X1 276 aaPredicted RBP11.96□□□□□ -0.49
TRAPPC9-203ENST00000517667 PABPC3Q9H361 631 aaKnown RBP11.96□□□□□ -0.49
TRAPPC9-203ENST00000517667 CYP3A43Q9HB55 503 aa11.96□□□□□ -0.49
TRAPPC9-203ENST00000517667 AASDHPPTQ9NRN7 309 aa11.96□□□□□ -0.49
TRAPPC9-203ENST00000517667 OLA1Q9NTK5 396 aaKnown RBP11.96□□□□□ -0.49
TRAPPC9-203ENST00000517667 ABCB8Q9NUT2 735 aa11.96□□□□□ -0.49
TRAPPC9-203ENST00000517667 GGA2Q9UJY4 613 aa11.96□□□□□ -0.49
TRAPPC9-203ENST00000517667 CLCA2Q9UQC9 943 aa11.96□□□□□ -0.49
TRAPPC9-203ENST00000517667 COL6A6A6NMZ7 2263 aa11.95□□□□□ -0.5
TRAPPC9-203ENST00000517667 PVALEFA0A1B0GWK0 134 aa11.95□□□□□ -0.5
TRAPPC9-203ENST00000517667 FAM47DPA6NHR8 397 aa11.95□□□□□ -0.5
TRAPPC9-203ENST00000517667 CBX4O00257 560 aa11.95□□□□□ -0.5
TRAPPC9-203ENST00000517667 SLFN14P0C7P3 912 aa11.95□□□□□ -0.5
TRAPPC9-203ENST00000517667 PABPC1P11940 636 aaKnown RBP11.95□□□□□ -0.5
TRAPPC9-203ENST00000517667 POLR2EP19388 210 aaKnown RBP11.95□□□□□ -0.5
TRAPPC9-203ENST00000517667 CLDN6P56747 220 aa11.95□□□□□ -0.5
TRAPPC9-203ENST00000517667 SLC8A3P57103 927 aa11.95□□□□□ -0.5
TRAPPC9-203ENST00000517667 TMPRSS3P57727 454 aa11.95□□□□□ -0.5
TRAPPC9-203ENST00000517667 YWHAGP61981 247 aaKnown RBP eCLIP11.95□□□□□ -0.54e-6■■■■□ 21.9
TRAPPC9-203ENST00000517667 RHDQ02161 417 aa11.95□□□□□ -0.5
TRAPPC9-203ENST00000517667 STK38Q15208 465 aa11.95□□□□□ -0.5
TRAPPC9-203ENST00000517667 TRIP4Q15650 581 aaPredicted RBP11.95□□□□□ -0.5
TRAPPC9-203ENST00000517667 ADGRF1Q5T601 910 aa11.95□□□□□ -0.5
TRAPPC9-203ENST00000517667 PPP1R26Q5T8A7 1209 aaPredicted RBP11.95□□□□□ -0.5
TRAPPC9-203ENST00000517667 BROXQ5VW32 411 aa11.95□□□□□ -0.5
TRAPPC9-203ENST00000517667 MBLAC2Q68D91 279 aa11.95□□□□□ -0.5
TRAPPC9-203ENST00000517667 SPOPLQ6IQ16 392 aa11.95□□□□□ -0.5
TRAPPC9-203ENST00000517667 FAM173BQ6P4H8 233 aa11.95□□□□□ -0.5
TRAPPC9-203ENST00000517667 PCSK4Q6UW60 755 aa11.95□□□□□ -0.5
TRAPPC9-203ENST00000517667 SV2AQ7L0J3 742 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms