RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 P2RY2P41231 377 aa13.8□□□□□ -0.2
RNF4-215ENST00000511843 ID4P47928 161 aa13.8□□□□□ -0.2
RNF4-215ENST00000511843 NUMBP49757 651 aa13.8□□□□□ -0.2
RNF4-215ENST00000511843 BPIFB4P59827 614 aa13.8□□□□□ -0.2
RNF4-215ENST00000511843 RPS24P62847 133 aaKnown RBP13.8□□□□□ -0.2
RNF4-215ENST00000511843 SYCP1Q15431 976 aa13.8□□□□□ -0.2
RNF4-215ENST00000511843 FKBP15Q5T1M5 1219 aa13.8□□□□□ -0.2
RNF4-215ENST00000511843 SDE2Q6IQ49 451 aa13.8□□□□□ -0.2
RNF4-215ENST00000511843 OLFML1Q6UWY5 402 aa13.8□□□□□ -0.2
RNF4-215ENST00000511843 ARMCX6Q7L4S7 300 aa13.8□□□□□ -0.2
RNF4-215ENST00000511843 KCNV2Q8TDN2 545 aa13.8□□□□□ -0.2
RNF4-215ENST00000511843 EPS8L1Q8TE68 723 aa13.8□□□□□ -0.2
RNF4-215ENST00000511843 IPO4Q8TEX9 1081 aaKnown RBP13.8□□□□□ -0.2
RNF4-215ENST00000511843 CYB5D2Q8WUJ1 264 aa13.8□□□□□ -0.2
RNF4-215ENST00000511843 PCMTD1Q96MG8 357 aaPredicted RBP13.8□□□□□ -0.2
RNF4-215ENST00000511843 SLC2A13Q96QE2 648 aa13.8□□□□□ -0.2
RNF4-215ENST00000511843 GABRG3Q99928 467 aa13.8□□□□□ -0.2
RNF4-215ENST00000511843 STK33Q9BYT3 514 aa13.8□□□□□ -0.2
RNF4-215ENST00000511843 SYNCQ9H7C4 482 aa13.8□□□□□ -0.2
RNF4-215ENST00000511843 FAM204AQ9H8W3 233 aa13.8□□□□□ -0.2
RNF4-215ENST00000511843 ABCB8Q9NUT2 735 aa13.8□□□□□ -0.2
RNF4-215ENST00000511843 ELOVL2Q9NXB9 296 aa13.8□□□□□ -0.2
RNF4-215ENST00000511843 CALCOCO1Q9P1Z2 691 aa13.8□□□□□ -0.2
RNF4-215ENST00000511843 LIMA1Q9UHB6 759 aaKnown RBP13.8□□□□□ -0.2
RNF4-215ENST00000511843 MBD1Q9UIS9 605 aaPredicted RBP13.8□□□□□ -0.2
RNF4-215ENST00000511843 CEP83Q9Y592 693 aa13.8□□□□□ -0.2
RNF4-215ENST00000511843 CEP250Q9BV73 2442 aa13.8□□□□□ -0.2
RNF4-215ENST00000511843 LGALS16A8MUM7 142 aa13.79□□□□□ -0.2
RNF4-215ENST00000511843 GDF9O60383 454 aa13.79□□□□□ -0.2
RNF4-215ENST00000511843 APOEP02649 317 aa13.79□□□□□ -0.2
RNF4-215ENST00000511843 ZNF18P17022 549 aa13.79□□□□□ -0.2
RNF4-215ENST00000511843 TFE3P19532 575 aaPredicted RBP13.79□□□□□ -0.2
RNF4-215ENST00000511843 CDK11BP21127 795 aaKnown RBP13.79□□□□□ -0.2
RNF4-215ENST00000511843 PRKCHP24723 683 aa13.79□□□□□ -0.2
RNF4-215ENST00000511843 CD70P32970 193 aa13.79□□□□□ -0.2
RNF4-215ENST00000511843 RNASE9P60153 205 aaKnown RBP13.79□□□□□ -0.2
RNF4-215ENST00000511843 CREB5Q02930 508 aa13.79□□□□□ -0.2
RNF4-215ENST00000511843 ZNF234Q14588 700 aa13.79□□□□□ -0.2
RNF4-215ENST00000511843 ELF2Q15723 593 aa13.79□□□□□ -0.2
RNF4-215ENST00000511843 RSPO4Q2I0M5 234 aaPredicted RBP13.79□□□□□ -0.2
RNF4-215ENST00000511843 RAP1GAP2Q684P5 730 aa13.79□□□□□ -0.2
RNF4-215ENST00000511843 PMS2CLQ68D20 193 aa13.79□□□□□ -0.2
RNF4-215ENST00000511843 TCEAL6Q6IPX3 200 aa13.79□□□□□ -0.2
RNF4-215ENST00000511843 PRR23CQ6ZRP0 262 aa13.79□□□□□ -0.2
RNF4-215ENST00000511843 CHST9Q7L1S5 443 aa13.79□□□□□ -0.2
RNF4-215ENST00000511843 BEND5Q7L4P6 421 aa13.79□□□□□ -0.2
RNF4-215ENST00000511843 APTXQ7Z2E3 356 aaKnown RBP13.79□□□□□ -0.2
RNF4-215ENST00000511843 CIR1Q86X95 450 aaPredicted RBP13.79□□□□□ -0.2
RNF4-215ENST00000511843 CACUL1Q86Y37 369 aa13.79□□□□□ -0.2
RNF4-215ENST00000511843 LGI2Q8N0V4 545 aa13.79□□□□□ -0.2
RNF4-215ENST00000511843 DEFB119Q8N690 84 aa13.79□□□□□ -0.2
RNF4-215ENST00000511843 ZNF366Q8N895 744 aa13.79□□□□□ -0.2
RNF4-215ENST00000511843 CPA5Q8WXQ8 436 aa13.79□□□□□ -0.2
RNF4-215ENST00000511843 TCEAL3Q969E4 200 aa13.79□□□□□ -0.2
RNF4-215ENST00000511843 NOX5Q96PH1 765 aa13.79□□□□□ -0.2
RNF4-215ENST00000511843 SLC2A11Q9BYW1 496 aa13.79□□□□□ -0.2
RNF4-215ENST00000511843 ADAM33Q9BZ11 813 aa13.79□□□□□ -0.2
RNF4-215ENST00000511843 RXFP3Q9NSD7 469 aa13.79□□□□□ -0.2
RNF4-215ENST00000511843 DDIT4Q9NX09 232 aa13.79□□□□□ -0.2
RNF4-215ENST00000511843 THAP10Q9P2Z0 257 aaPredicted RBP13.79□□□□□ -0.2
RNF4-215ENST00000511843 GGA2Q9UJY4 613 aa13.79□□□□□ -0.2
RNF4-215ENST00000511843 NOCTQ9UK39 431 aaKnown RBP13.79□□□□□ -0.2
RNF4-215ENST00000511843 PI4KAP42356 2102 aa13.79□□□□□ -0.2
RNF4-215ENST00000511843 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.78□□□□□ -0.2
RNF4-215ENST00000511843 HSF2BPO75031 334 aa13.78□□□□□ -0.2
RNF4-215ENST00000511843 DAB1O75553 588 aa13.78□□□□□ -0.2
RNF4-215ENST00000511843 PABPC1P11940 636 aaKnown RBP13.78□□□□□ -0.2
RNF4-215ENST00000511843 HLA-EP13747 358 aa13.78□□□□□ -0.2
RNF4-215ENST00000511843 GGCXP38435 758 aa13.78□□□□□ -0.2
RNF4-215ENST00000511843 MPLP40238 635 aa13.78□□□□□ -0.2
RNF4-215ENST00000511843 DHPSP49366 369 aaPredicted RBP13.78□□□□□ -0.2
RNF4-215ENST00000511843 JAM2P57087 298 aa13.78□□□□□ -0.2
RNF4-215ENST00000511843 ZNF445P59923 1031 aa13.78□□□□□ -0.2
RNF4-215ENST00000511843 CDK17Q00537 523 aa13.78□□□□□ -0.2
RNF4-215ENST00000511843 SLC6A3Q01959 620 aa13.78□□□□□ -0.2
RNF4-215ENST00000511843 UBXN1Q04323 297 aa13.78□□□□□ -0.2
RNF4-215ENST00000511843 NME3Q13232 169 aa13.78□□□□□ -0.2
RNF4-215ENST00000511843 NNTQ13423 1086 aa13.78□□□□□ -0.2
RNF4-215ENST00000511843 CSRP2Q16527 193 aa13.78□□□□□ -0.2
RNF4-215ENST00000511843 MAP7D1Q3KQU3 841 aa13.78□□□□□ -0.2
RNF4-215ENST00000511843 FUT11Q495W5 492 aa13.78□□□□□ -0.2
RNF4-215ENST00000511843 MS4A13Q5J8X5 152 aa13.78□□□□□ -0.2
RNF4-215ENST00000511843 EFHC1Q5JVL4 640 aa13.78□□□□□ -0.2
RNF4-215ENST00000511843 OTUD1Q5VV17 481 aaPredicted RBP13.78□□□□□ -0.2
RNF4-215ENST00000511843 NAA35Q5VZE5 725 aa13.78□□□□□ -0.2
RNF4-215ENST00000511843 KIAA1324Q6UXG2 1013 aaKnown RBP13.78□□□□□ -0.2
RNF4-215ENST00000511843 MMS22LQ6ZRQ5 1243 aa13.78□□□□□ -0.2
RNF4-215ENST00000511843 SLC26A9Q7LBE3 791 aa13.78□□□□□ -0.2
RNF4-215ENST00000511843 ADIPOR2Q86V24 386 aa13.78□□□□□ -0.2
RNF4-215ENST00000511843 CHSY1Q86X52 802 aa13.78□□□□□ -0.2
RNF4-215ENST00000511843 DHX40Q8IX18 779 aaKnown RBP13.78□□□□□ -0.2
RNF4-215ENST00000511843 TMEFF1Q8IYR6 380 aa13.78□□□□□ -0.2
RNF4-215ENST00000511843 CARNMT1Q8N4J0 409 aa13.78□□□□□ -0.2
RNF4-215ENST00000511843 HJURPQ8NCD3 748 aaPredicted RBP13.78□□□□□ -0.2
RNF4-215ENST00000511843 TMEM35BQ8NCS4 154 aa13.78□□□□□ -0.2
RNF4-215ENST00000511843 TRIM62Q9BVG3 475 aa13.78□□□□□ -0.2
RNF4-215ENST00000511843 ASNSD1Q9NWL6 643 aa13.78□□□□□ -0.2
RNF4-215ENST00000511843 NUMA1Q14980 2115 aa13.78□□□□□ -0.2
RNF4-215ENST00000511843 GON4LQ3T8J9 2241 aa13.78□□□□□ -0.2
RNF4-215ENST00000511843 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms