RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 BEX4Q9NWD9 120 aaPredicted RBP6.02□□□□□ -1.45
HMGB1P47-201ENST00000511281 PARPBPQ9NWS1 579 aa6.02□□□□□ -1.45
HMGB1P47-201ENST00000511281 KCTD5Q9NXV2 234 aa6.02□□□□□ -1.45
HMGB1P47-201ENST00000511281 GAR1Q9NY12 217 aaKnown RBP6.02□□□□□ -1.45
HMGB1P47-201ENST00000511281 TTLL3Q9Y4R7 772 aa6.02□□□□□ -1.45
HMGB1P47-201ENST00000511281 ENTPD2Q9Y5L3 495 aa6.02□□□□□ -1.45
HMGB1P47-201ENST00000511281 KDM3AQ9Y4C1 1321 aa6.01□□□□□ -1.45
HMGB1P47-201ENST00000511281 H3BNC9 293 aa6.01□□□□□ -1.45
HMGB1P47-201ENST00000511281 PEX12O00623 359 aa6.01□□□□□ -1.45
HMGB1P47-201ENST00000511281 MPPED1O15442 326 aa6.01□□□□□ -1.45
HMGB1P47-201ENST00000511281 FAM20BO75063 409 aa6.01□□□□□ -1.45
HMGB1P47-201ENST00000511281 ALDOAP04075 364 aaKnown RBP6.01□□□□□ -1.45
HMGB1P47-201ENST00000511281 CLEC3BP05452 202 aa6.01□□□□□ -1.45
HMGB1P47-201ENST00000511281 TMIGD3P0DMS9 266 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P47-201ENST00000511281 ZNF37AP17032 561 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P47-201ENST00000511281 YY1P25490 414 aa6.01□□□□□ -1.45
HMGB1P47-201ENST00000511281 EPHA8P29322 1005 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P47-201ENST00000511281 ARL1P40616 181 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P47-201ENST00000511281 POLD2P49005 469 aa6.01□□□□□ -1.45
HMGB1P47-201ENST00000511281 DRG2P55039 364 aaKnown RBP6.01□□□□□ -1.45
HMGB1P47-201ENST00000511281 TPTEP56180 551 aa6.01□□□□□ -1.45
HMGB1P47-201ENST00000511281 E2F1Q01094 437 aa6.01□□□□□ -1.45
HMGB1P47-201ENST00000511281 TP53BP2Q13625 1128 aa6.01□□□□□ -1.45
HMGB1P47-201ENST00000511281 SEC23BQ15437 767 aa6.01□□□□□ -1.45
HMGB1P47-201ENST00000511281 LRRC24Q50LG9 513 aa6.01□□□□□ -1.45
HMGB1P47-201ENST00000511281 HAUS3Q68CZ6 603 aa6.01□□□□□ -1.45
HMGB1P47-201ENST00000511281 TMEM88Q6PEY1 159 aa6.01□□□□□ -1.45
HMGB1P47-201ENST00000511281 Q6ZWC4 215 aa6.01□□□□□ -1.45
HMGB1P47-201ENST00000511281 WDR53Q7Z5U6 358 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P47-201ENST00000511281 P3H2Q8IVL5 708 aa6.01□□□□□ -1.45
HMGB1P47-201ENST00000511281 SIRT6Q8N6T7 355 aa6.01□□□□□ -1.45
HMGB1P47-201ENST00000511281 LINC01465Q8N7H1 131 aa6.01□□□□□ -1.45
HMGB1P47-201ENST00000511281 PDILTQ8N807 584 aa6.01□□□□□ -1.45
HMGB1P47-201ENST00000511281 IL17DQ8TAD2 202 aa6.01□□□□□ -1.45
HMGB1P47-201ENST00000511281 SLC25A43Q8WUT9 341 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P47-201ENST00000511281 STAMQ92783 540 aa6.01□□□□□ -1.45
HMGB1P47-201ENST00000511281 THAP7Q9BT49 309 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P47-201ENST00000511281 CINPQ9BW66 212 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P47-201ENST00000511281 SMYD2Q9NRG4 433 aa6.01□□□□□ -1.45
HMGB1P47-201ENST00000511281 SNX15Q9NRS6 342 aa6.01□□□□□ -1.45
HMGB1P47-201ENST00000511281 SEMA5BQ9P283 1151 aa6.01□□□□□ -1.45
HMGB1P47-201ENST00000511281 SUFUQ9UMX1 484 aa6.01□□□□□ -1.45
HMGB1P47-201ENST00000511281 GPR34Q9UPC5 381 aa6.01□□□□□ -1.45
HMGB1P47-201ENST00000511281 COPG1Q9Y678 874 aaKnown RBP6.01□□□□□ -1.45
HMGB1P47-201ENST00000511281 SH2D7A6NKC9 451 aaPredicted RBP6□□□□□ -1.45
HMGB1P47-201ENST00000511281 GRM8O00222 908 aa6□□□□□ -1.45
HMGB1P47-201ENST00000511281 ANP32CO43423 234 aa6□□□□□ -1.45
HMGB1P47-201ENST00000511281 CA12O43570 354 aa6□□□□□ -1.45
HMGB1P47-201ENST00000511281 SGPL1O95470 568 aa6□□□□□ -1.45
HMGB1P47-201ENST00000511281 METTL18O95568 372 aa6□□□□□ -1.45
HMGB1P47-201ENST00000511281 MYCLP12524 364 aaPredicted RBP6□□□□□ -1.45
HMGB1P47-201ENST00000511281 FOLR3P41439 243 aa6□□□□□ -1.45
HMGB1P47-201ENST00000511281 STAT1P42224 750 aa6□□□□□ -1.45
HMGB1P47-201ENST00000511281 DIO1P49895 249 aa6□□□□□ -1.45
HMGB1P47-201ENST00000511281 RPP30P78346 268 aaKnown RBP6□□□□□ -1.45
HMGB1P47-201ENST00000511281 BLOC1S1P78537 153 aa6□□□□□ -1.45
HMGB1P47-201ENST00000511281 TXNL4AP83876 142 aaKnown RBP6□□□□□ -1.45
HMGB1P47-201ENST00000511281 RNASELQ05823 741 aaKnown RBP6□□□□□ -1.45
HMGB1P47-201ENST00000511281 TXNRD1Q16881 649 aa6□□□□□ -1.45
HMGB1P47-201ENST00000511281 ABHD17BQ5VST6 288 aa6□□□□□ -1.45
HMGB1P47-201ENST00000511281 SNX30Q5VWJ9 437 aa6□□□□□ -1.45
HMGB1P47-201ENST00000511281 DPY19L3Q6ZPD9 716 aa6□□□□□ -1.45
HMGB1P47-201ENST00000511281 LCNL1Q6ZST4 164 aa6□□□□□ -1.45
HMGB1P47-201ENST00000511281 B4GALNT4Q76KP1 1039 aa6□□□□□ -1.45
HMGB1P47-201ENST00000511281 CHD1LQ86WJ1 897 aa6□□□□□ -1.45
HMGB1P47-201ENST00000511281 SFTPA1Q8IWL2 248 aa6□□□□□ -1.45
HMGB1P47-201ENST00000511281 ADSSL1Q8N142 457 aa6□□□□□ -1.45
HMGB1P47-201ENST00000511281 ZNF366Q8N895 744 aa6□□□□□ -1.45
HMGB1P47-201ENST00000511281 XAGE5Q8WWM1 108 aa6□□□□□ -1.45
HMGB1P47-201ENST00000511281 EDC3Q96F86 508 aaKnown RBP6□□□□□ -1.45
HMGB1P47-201ENST00000511281 PRR11Q96HE9 360 aaPredicted RBP6□□□□□ -1.45
HMGB1P47-201ENST00000511281 KAZALD1Q96I82 304 aa6□□□□□ -1.45
HMGB1P47-201ENST00000511281 LENG8Q96PV6 779 aaPredicted RBP6□□□□□ -1.45
HMGB1P47-201ENST00000511281 SNX18Q96RF0 628 aa6□□□□□ -1.45
HMGB1P47-201ENST00000511281 LMAN2LQ9H0V9 348 aa6□□□□□ -1.45
HMGB1P47-201ENST00000511281 TAS2R10Q9NYW0 307 aa6□□□□□ -1.45
HMGB1P47-201ENST00000511281 HCN3Q9P1Z3 774 aa6□□□□□ -1.45
HMGB1P47-201ENST00000511281 MGAT4CQ9UBM8 478 aa6□□□□□ -1.45
HMGB1P47-201ENST00000511281 DKK3Q9UBP4 350 aa6□□□□□ -1.45
HMGB1P47-201ENST00000511281 AMFRQ9UKV5 643 aa6□□□□□ -1.45
HMGB1P47-201ENST00000511281 NAALADL1Q9UQQ1 740 aa6□□□□□ -1.45
HMGB1P47-201ENST00000511281 CENPVL1A0A0U1RR11 272 aa5.99□□□□□ -1.45
HMGB1P47-201ENST00000511281 PIPSLA2A3N6 862 aa5.99□□□□□ -1.45
HMGB1P47-201ENST00000511281 YY2O15391 372 aa5.99□□□□□ -1.45
HMGB1P47-201ENST00000511281 PTP4A3O75365 173 aa5.99□□□□□ -1.45
HMGB1P47-201ENST00000511281 LAMP2P13473 410 aa5.99□□□□□ -1.45
HMGB1P47-201ENST00000511281 ZFXP17010 805 aaPredicted RBP5.99□□□□□ -1.45
HMGB1P47-201ENST00000511281 RAD52P43351 418 aa5.99□□□□□ -1.45
HMGB1P47-201ENST00000511281 MVDP53602 400 aa5.99□□□□□ -1.45
HMGB1P47-201ENST00000511281 GPC5P78333 572 aa5.99□□□□□ -1.45
HMGB1P47-201ENST00000511281 SETQ01105 290 aaPredicted RBP5.99□□□□□ -1.45
HMGB1P47-201ENST00000511281 CCDC15Q0P6D6 951 aa5.99□□□□□ -1.45
HMGB1P47-201ENST00000511281 EIF4A2Q14240 407 aaKnown RBP5.99□□□□□ -1.45
HMGB1P47-201ENST00000511281 ZNF766Q5HY98 468 aa5.99□□□□□ -1.45
HMGB1P47-201ENST00000511281 TMEM63BQ5T3F8 832 aa5.99□□□□□ -1.45
HMGB1P47-201ENST00000511281 SYNE3Q6ZMZ3 975 aa5.99□□□□□ -1.45
HMGB1P47-201ENST00000511281 PARS2Q7L3T8 475 aaKnown RBP5.99□□□□□ -1.45
HMGB1P47-201ENST00000511281 ZNF551Q7Z340 670 aaPredicted RBP5.99□□□□□ -1.45
HMGB1P47-201ENST00000511281 DIS3L2Q8IYB7 885 aaKnown RBP5.99□□□□□ -1.45
HMGB1P47-201ENST00000511281 LAS2Q8IYD9 372 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms