RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 SLC15A4Q8N697 577 aa7.8□□□□□ -1.16
USP53-206ENST00000510737 NT5C1BQ96P26 610 aa7.8□□□□□ -1.16
USP53-206ENST00000510737 MAP3K14Q99558 947 aa7.8□□□□□ -1.16
USP53-206ENST00000510737 DPCDQ9BVM2 203 aaPredicted RBP7.8□□□□□ -1.16
USP53-206ENST00000510737 ZNF580Q9UK33 172 aa7.8□□□□□ -1.16
USP53-206ENST00000510737 PRUNE2Q8WUY3 3088 aa7.79□□□□□ -1.16
USP53-206ENST00000510737 INSIG1O15503 277 aa7.79□□□□□ -1.16
USP53-206ENST00000510737 PRKCBP05771 671 aa7.79□□□□□ -1.16
USP53-206ENST00000510737 TRIM71Q2Q1W2 868 aaKnown RBP7.79□□□□□ -1.16
USP53-206ENST00000510737 ZBTB46Q86UZ6 589 aa7.79□□□□□ -1.16
USP53-206ENST00000510737 GAS2L3Q86XJ1 694 aa7.79□□□□□ -1.16
USP53-206ENST00000510737 C16orf52Q8NHV5 167 aa7.79□□□□□ -1.16
USP53-206ENST00000510737 ZNF398Q8TD17 642 aa7.79□□□□□ -1.16
USP53-206ENST00000510737 FAM118BQ9BPY3 351 aa7.79□□□□□ -1.16
USP53-206ENST00000510737 C17orf80Q9BSJ5 609 aa7.79□□□□□ -1.16
USP53-206ENST00000510737 HTATIP2Q9BUP3 242 aa7.79□□□□□ -1.16
USP53-206ENST00000510737 MYOZ2Q9NPC6 264 aa7.79□□□□□ -1.16
USP53-206ENST00000510737 LPAR3Q9UBY5 353 aa7.79□□□□□ -1.16
USP53-206ENST00000510737 COL4A3BPQ9Y5P4 624 aa7.79□□□□□ -1.16
USP53-206ENST00000510737 MAP3K15Q6ZN16 1313 aa7.78□□□□□ -1.16
USP53-206ENST00000510737 A0A088AWK7 358 aa7.78□□□□□ -1.16
USP53-206ENST00000510737 LY6G6EA0A0G2JKS1 128 aa7.78□□□□□ -1.16
USP53-206ENST00000510737 FGAP02671 866 aa7.78□□□□□ -1.16
USP53-206ENST00000510737 FGBP02675 491 aa7.78□□□□□ -1.16
USP53-206ENST00000510737 CYP2C9P11712 490 aa7.78□□□□□ -1.16
USP53-206ENST00000510737 PRF1P14222 555 aa7.78□□□□□ -1.16
USP53-206ENST00000510737 KRT17Q04695 432 aa7.78□□□□□ -1.16
USP53-206ENST00000510737 GRAPQ13588 217 aa7.78□□□□□ -1.16
USP53-206ENST00000510737 RAPGEF1Q13905 1077 aa7.78□□□□□ -1.16
USP53-206ENST00000510737 ZNF268Q14587 947 aaPredicted RBP7.78□□□□□ -1.16
USP53-206ENST00000510737 ARMC9Q7Z3E5 817 aa7.78□□□□□ -1.16
USP53-206ENST00000510737 MORC1Q86VD1 984 aa7.78□□□□□ -1.16
USP53-206ENST00000510737 GRAPLQ8TC17 118 aaPredicted RBP7.78□□□□□ -1.16
USP53-206ENST00000510737 PIGOQ8TEQ8 1089 aa7.78□□□□□ -1.16
USP53-206ENST00000510737 MTFMTQ96DP5 389 aaKnown RBP7.78□□□□□ -1.16
USP53-206ENST00000510737 CLMNQ96JQ2 1002 aa7.78□□□□□ -1.16
USP53-206ENST00000510737 NUP88Q99567 741 aaPredicted RBP7.78□□□□□ -1.16
USP53-206ENST00000510737 GDF15Q99988 308 aa7.78□□□□□ -1.16
USP53-206ENST00000510737 TRIM54Q9BYV2 358 aa7.78□□□□□ -1.16
USP53-206ENST00000510737 IP6K2Q9UHH9 426 aa7.78□□□□□ -1.16
USP53-206ENST00000510737 IBTKQ9P2D0 1353 aaPredicted RBP7.78□□□□□ -1.16
USP53-206ENST00000510737 DUOX1Q9NRD9 1551 aa7.78□□□□□ -1.16
USP53-206ENST00000510737 CEMIPQ8WUJ3 1361 aa7.77□□□□□ -1.17
USP53-206ENST00000510737 TMEM233B4DJY2 109 aa7.77□□□□□ -1.17
USP53-206ENST00000510737 THP07101 528 aa7.77□□□□□ -1.17
USP53-206ENST00000510737 PF4V1P10720 104 aa7.77□□□□□ -1.17
USP53-206ENST00000510737 CTBP1Q13363 440 aa7.77□□□□□ -1.17
USP53-206ENST00000510737 RBMS2Q15434 407 aaKnown RBP7.77□□□□□ -1.17
USP53-206ENST00000510737 LRIT3Q3SXY7 679 aa7.77□□□□□ -1.17
USP53-206ENST00000510737 PLA1AQ53H76 456 aa7.77□□□□□ -1.17
USP53-206ENST00000510737 PPP1R42Q7Z4L9 355 aa7.77□□□□□ -1.17
USP53-206ENST00000510737 AGBL3Q8NEM8 1001 aa7.77□□□□□ -1.17
USP53-206ENST00000510737 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.77□□□□□ -1.17
USP53-206ENST00000510737 BPIFB1Q8TDL5 484 aa7.77□□□□□ -1.17
USP53-206ENST00000510737 PNISRQ8TF01 805 aaKnown RBP7.77□□□□□ -1.17
USP53-206ENST00000510737 FAM122AQ96E09 287 aa7.77□□□□□ -1.17
USP53-206ENST00000510737 C1GALT1C1Q96EU7 318 aa7.77□□□□□ -1.17
USP53-206ENST00000510737 VCPIP1Q96JH7 1222 aa7.77□□□□□ -1.17
USP53-206ENST00000510737 ARHGAP39Q9C0H5 1083 aa7.77□□□□□ -1.17
USP53-206ENST00000510737 EBF3Q9H4W6 596 aa7.77□□□□□ -1.17
USP53-206ENST00000510737 LAMA2P24043 3122 aaKnown RBP7.76□□□□□ -1.17
USP53-206ENST00000510737 MYCLP12524 364 aaPredicted RBP7.76□□□□□ -1.17
USP53-206ENST00000510737 NF2P35240 595 aa7.76□□□□□ -1.17
USP53-206ENST00000510737 SEC23BQ15437 767 aa7.76□□□□□ -1.17
USP53-206ENST00000510737 MGAT5BQ3V5L5 792 aa7.76□□□□□ -1.17
USP53-206ENST00000510737 ZDHHC17Q8IUH5 632 aa7.76□□□□□ -1.17
USP53-206ENST00000510737 TBC1D16Q8TBP0 767 aa7.76□□□□□ -1.17
USP53-206ENST00000510737 ADAMTS18Q8TE60 1221 aa7.76□□□□□ -1.17
USP53-206ENST00000510737 DIS3LQ8TF46 1054 aaKnown RBP7.76□□□□□ -1.17
USP53-206ENST00000510737 GUCD1Q96NT3 240 aa7.76□□□□□ -1.17
USP53-206ENST00000510737 UTP14AQ9BVJ6 771 aaKnown RBP7.76□□□□□ -1.17
USP53-206ENST00000510737 PANK3Q9H999 370 aa7.76□□□□□ -1.17
USP53-206ENST00000510737 TRMT13Q9NUP7 481 aaKnown RBP7.76□□□□□ -1.17
USP53-206ENST00000510737 GABBR1Q9UBS5 961 aa7.76□□□□□ -1.17
USP53-206ENST00000510737 AMFRQ9UKV5 643 aa7.76□□□□□ -1.17
USP53-206ENST00000510737 RRP7AQ9Y3A4 280 aaKnown RBP7.76□□□□□ -1.17
USP53-206ENST00000510737 LRP12Q9Y561 859 aa7.76□□□□□ -1.17
USP53-206ENST00000510737 LAMB1P07942 1786 aa7.76□□□□□ -1.17
USP53-206ENST00000510737 IGSF3O75054 1194 aa7.75□□□□□ -1.17
USP53-206ENST00000510737 SNHG28P0DPA3 235 aa7.75□□□□□ -1.17
USP53-206ENST00000510737 GKP32189 559 aa7.75□□□□□ -1.17
USP53-206ENST00000510737 PLCD1P51178 756 aa7.75□□□□□ -1.17
USP53-206ENST00000510737 KRTAP10-7P60409 375 aaPredicted RBP7.75□□□□□ -1.17
USP53-206ENST00000510737 FGL2Q14314 439 aa7.75□□□□□ -1.17
USP53-206ENST00000510737 ARHGEF6Q15052 776 aa7.75□□□□□ -1.17
USP53-206ENST00000510737 C10orf25Q5T742 122 aa7.75□□□□□ -1.17
USP53-206ENST00000510737 PIP4P1Q86T03 277 aa7.75□□□□□ -1.17
USP53-206ENST00000510737 IGFBPL1Q8WX77 278 aa7.75□□□□□ -1.17
USP53-206ENST00000510737 CELF1Q92879 486 aaKnown RBP7.75□□□□□ -1.17
USP53-206ENST00000510737 PPP2R3CQ969Q6 453 aa7.75□□□□□ -1.17
USP53-206ENST00000510737 RSPRY1Q96DX4 576 aa7.75□□□□□ -1.17
USP53-206ENST00000510737 HOOK2Q96ED9 719 aa7.75□□□□□ -1.17
USP53-206ENST00000510737 HOMER2Q9NSB8 354 aa7.75□□□□□ -1.17
USP53-206ENST00000510737 PIH1D1Q9NWS0 290 aaKnown RBP7.75□□□□□ -1.17
USP53-206ENST00000510737 TTC28Q96AY4 2481 aa7.75□□□□□ -1.17
USP53-206ENST00000510737 MYO1CO00159 1063 aa7.74□□□□□ -1.17
USP53-206ENST00000510737 DSCR3O14972 297 aa7.74□□□□□ -1.17
USP53-206ENST00000510737 PMPCBO75439 489 aa7.74□□□□□ -1.17
USP53-206ENST00000510737 MYL6BP14649 208 aa7.74□□□□□ -1.17
USP53-206ENST00000510737 TKTP29401 623 aaKnown RBP7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms