RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 TRIM66O15016 1216 aa18.21■□□□□ 0.51
SFXN1-208ENST00000507823 NCAM2O15394 837 aa18.21■□□□□ 0.51
SFXN1-208ENST00000507823 ZWINTO95229 277 aa18.21■□□□□ 0.51
SFXN1-208ENST00000507823 FOXN2P32314 431 aa18.21■□□□□ 0.51
SFXN1-208ENST00000507823 YWHAGP61981 247 aaKnown RBP eCLIP18.21■□□□□ 0.51
SFXN1-208ENST00000507823 PAN2Q504Q3 1202 aaKnown RBP18.21■□□□□ 0.51
SFXN1-208ENST00000507823 BSPRYQ5W0U4 402 aa18.21■□□□□ 0.51
SFXN1-208ENST00000507823 PDZD4Q76G19 769 aaPredicted RBP18.21■□□□□ 0.51
SFXN1-208ENST00000507823 ANKS4BQ8N8V4 417 aa18.21■□□□□ 0.51
SFXN1-208ENST00000507823 BANPQ8N9N5 519 aa18.21■□□□□ 0.51
SFXN1-208ENST00000507823 CAPNS2Q96L46 248 aa18.21■□□□□ 0.51
SFXN1-208ENST00000507823 TGS1Q96RS0 853 aaKnown RBP18.21■□□□□ 0.51
SFXN1-208ENST00000507823 TMEM209Q96SK2 561 aa18.21■□□□□ 0.51
SFXN1-208ENST00000507823 PRDM12Q9H4Q4 367 aa18.21■□□□□ 0.51
SFXN1-208ENST00000507823 TNFRSF10BO14763 440 aa18.2■□□□□ 0.5
SFXN1-208ENST00000507823 CREB3O43889 395 aa18.2■□□□□ 0.5
SFXN1-208ENST00000507823 B4GALT3O60512 393 aa18.2■□□□□ 0.5
SFXN1-208ENST00000507823 SPAG7O75391 227 aa18.2■□□□□ 0.5
SFXN1-208ENST00000507823 STK10O94804 968 aaKnown RBP18.2■□□□□ 0.5
SFXN1-208ENST00000507823 ERCC2P18074 760 aa18.2■□□□□ 0.5
SFXN1-208ENST00000507823 TSPY1Q01534 308 aa18.2■□□□□ 0.5
SFXN1-208ENST00000507823 MTM1Q13496 603 aa18.2■□□□□ 0.5
SFXN1-208ENST00000507823 PARP6Q2NL67 630 aa18.2■□□□□ 0.5
SFXN1-208ENST00000507823 CLLU1OSQ5K130 101 aa18.2■□□□□ 0.5
SFXN1-208ENST00000507823 STEAP4Q687X5 459 aa18.2■□□□□ 0.5
SFXN1-208ENST00000507823 GLB1LQ6UWU2 654 aa18.2■□□□□ 0.5
SFXN1-208ENST00000507823 C4orf33Q8N1A6 199 aa18.2■□□□□ 0.5
SFXN1-208ENST00000507823 GDAP1Q8TB36 358 aa18.2■□□□□ 0.5
SFXN1-208ENST00000507823 ELAC2Q9BQ52 826 aaKnown RBP18.2■□□□□ 0.5
SFXN1-208ENST00000507823 FERMT1Q9BQL6 677 aa18.2■□□□□ 0.5
SFXN1-208ENST00000507823 MLXIPLQ9NP71 852 aa18.2■□□□□ 0.5
SFXN1-208ENST00000507823 FGFR1OP2Q9NVK5 253 aa18.2■□□□□ 0.5
SFXN1-208ENST00000507823 DNAH12Q6ZR08 3092 aa18.2■□□□□ 0.5
SFXN1-208ENST00000507823 SYNJ2BP-COX16A0A087WUM0 186 aa18.2■□□□□ 0.5
SFXN1-208ENST00000507823 IQANK1A0A1B0GTG1 560 aa18.2■□□□□ 0.5
SFXN1-208ENST00000507823 RNF103O00237 685 aa18.2■□□□□ 0.5
SFXN1-208ENST00000507823 COL6A1P12109 1028 aa18.2■□□□□ 0.5
SFXN1-208ENST00000507823 KRT4P19013 534 aa18.2■□□□□ 0.5
SFXN1-208ENST00000507823 RPA3P35244 121 aaPredicted RBP18.2■□□□□ 0.5
SFXN1-208ENST00000507823 SLC18A2Q05940 514 aa18.2■□□□□ 0.5
SFXN1-208ENST00000507823 PDK4Q16654 411 aa18.2■□□□□ 0.5
SFXN1-208ENST00000507823 FAM43BQ6ZT52 329 aaPredicted RBP18.2■□□□□ 0.5
SFXN1-208ENST00000507823 CTU1Q7Z7A3 348 aaKnown RBP18.2■□□□□ 0.5
SFXN1-208ENST00000507823 SLC26A11Q86WA9 606 aa18.2■□□□□ 0.5
SFXN1-208ENST00000507823 CD99L2Q8TCZ2 262 aa18.2■□□□□ 0.5
SFXN1-208ENST00000507823 GRAMD1AQ96CP6 724 aa18.2■□□□□ 0.5
SFXN1-208ENST00000507823 TRPV6Q9H1D0 765 aa18.2■□□□□ 0.5
SFXN1-208ENST00000507823 OSBPL2Q9H1P3 480 aa18.2■□□□□ 0.5
SFXN1-208ENST00000507823 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.2■□□□□ 0.5
SFXN1-208ENST00000507823 COX16Q9P0S2 106 aa18.2■□□□□ 0.5
SFXN1-208ENST00000507823 TM9SF1O15321 606 aa18.19■□□□□ 0.5
SFXN1-208ENST00000507823 OAZ2O95190 189 aa18.19■□□□□ 0.5
SFXN1-208ENST00000507823 APOEP02649 317 aa18.19■□□□□ 0.5
SFXN1-208ENST00000507823 CYP2C18P33260 490 aa18.19■□□□□ 0.5
SFXN1-208ENST00000507823 SARNPP82979 210 aaKnown RBP18.19■□□□□ 0.5
SFXN1-208ENST00000507823 FAM182AQ5T1J6 154 aa18.19■□□□□ 0.5
SFXN1-208ENST00000507823 SYCP2LQ5T4T6 812 aa18.19■□□□□ 0.5
SFXN1-208ENST00000507823 LRRC8BQ6P9F7 803 aa18.19■□□□□ 0.5
SFXN1-208ENST00000507823 UNC5AQ6ZN44 842 aa18.19■□□□□ 0.5
SFXN1-208ENST00000507823 CCDC121Q6ZUS5 278 aa18.19■□□□□ 0.5
SFXN1-208ENST00000507823 PRPF39Q86UA1 669 aaKnown RBP18.19■□□□□ 0.5
SFXN1-208ENST00000507823 TAC4Q86UU9 113 aa18.19■□□□□ 0.5
SFXN1-208ENST00000507823 COLGALT2Q8IYK4 626 aa18.19■□□□□ 0.5
SFXN1-208ENST00000507823 COLGALT1Q8NBJ5 622 aa18.19■□□□□ 0.5
SFXN1-208ENST00000507823 ADAM32Q8TC27 787 aa18.19■□□□□ 0.5
SFXN1-208ENST00000507823 APBB2Q92870 758 aa18.19■□□□□ 0.5
SFXN1-208ENST00000507823 PRKAG3Q9UGI9 489 aa18.19■□□□□ 0.5
SFXN1-208ENST00000507823 FAM159BA6NKW6 160 aa18.19■□□□□ 0.5
SFXN1-208ENST00000507823 CCT8L1PA6NM43 557 aa18.19■□□□□ 0.5
SFXN1-208ENST00000507823 DDHD2O94830 711 aa18.19■□□□□ 0.5
SFXN1-208ENST00000507823 TPI1P60174 286 aa18.19■□□□□ 0.5
SFXN1-208ENST00000507823 PPIDQ08752 370 aaKnown RBP18.19■□□□□ 0.5
SFXN1-208ENST00000507823 MTFR1Q15390 333 aa18.19■□□□□ 0.5
SFXN1-208ENST00000507823 SLC1A5Q15758 541 aa18.19■□□□□ 0.5
SFXN1-208ENST00000507823 NUGGCQ68CJ6 796 aa18.19■□□□□ 0.5
SFXN1-208ENST00000507823 C4orf50Q6ZRC1 276 aa18.19■□□□□ 0.5
SFXN1-208ENST00000507823 DQX1Q8TE96 717 aaKnown RBP18.19■□□□□ 0.5
SFXN1-208ENST00000507823 DPF3Q92784 378 aa18.19■□□□□ 0.5
SFXN1-208ENST00000507823 ACTR5Q9H9F9 607 aaPredicted RBP18.19■□□□□ 0.5
SFXN1-208ENST00000507823 ARHGEF38Q9NXL2 777 aa18.19■□□□□ 0.5
SFXN1-208ENST00000507823 USP15Q9Y4E8 981 aaPredicted RBP18.19■□□□□ 0.5
SFXN1-208ENST00000507823 A0A1W2PQ45 241 aaPredicted RBP18.19■□□□□ 0.5
SFXN1-208ENST00000507823 A0A1W2PQY0 241 aa18.19■□□□□ 0.5
SFXN1-208ENST00000507823 CA4P22748 312 aa18.19■□□□□ 0.5
SFXN1-208ENST00000507823 NOMO2Q5JPE7 1267 aa18.19■□□□□ 0.5
SFXN1-208ENST00000507823 DENND5BQ6ZUT9 1274 aa18.19■□□□□ 0.5
SFXN1-208ENST00000507823 CCDC33Q8N5R6 958 aa18.19■□□□□ 0.5
SFXN1-208ENST00000507823 GSDMBQ8TAX9 411 aa18.19■□□□□ 0.5
SFXN1-208ENST00000507823 HASPINQ8TF76 798 aa18.19■□□□□ 0.5
SFXN1-208ENST00000507823 FTHL17Q9BXU8 183 aa18.19■□□□□ 0.5
SFXN1-208ENST00000507823 WDCPQ9H6R7 721 aa18.19■□□□□ 0.5
SFXN1-208ENST00000507823 GPBP1L1Q9HC44 474 aaPredicted RBP18.19■□□□□ 0.5
SFXN1-208ENST00000507823 TMEM51Q9NW97 253 aa18.19■□□□□ 0.5
SFXN1-208ENST00000507823 KANSL3Q9P2N6 904 aa18.19■□□□□ 0.5
SFXN1-208ENST00000507823 GRID1Q9ULK0 1009 aa18.19■□□□□ 0.5
SFXN1-208ENST00000507823 PCDHA11Q9Y5I1 949 aa18.19■□□□□ 0.5
SFXN1-208ENST00000507823 F8W810 466 aa18.18■□□□□ 0.5
SFXN1-208ENST00000507823 ALDH1A2O94788 518 aa18.18■□□□□ 0.5
SFXN1-208ENST00000507823 INHBAP08476 426 aa18.18■□□□□ 0.5
SFXN1-208ENST00000507823 YWHAHQ04917 246 aaPredicted RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms