RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 DHCR24Q15392 516 aa13.75□□□□□ -0.21
PDLIM7-212ENST00000504380 FAM133BQ5BKY9 247 aaKnown RBP13.75□□□□□ -0.21
PDLIM7-212ENST00000504380 MS4A13Q5J8X5 152 aa13.75□□□□□ -0.21
PDLIM7-212ENST00000504380 BRMS1LQ5PSV4 323 aa13.75□□□□□ -0.21
PDLIM7-212ENST00000504380 NAIF1Q69YI7 327 aaPredicted RBP13.75□□□□□ -0.21
PDLIM7-212ENST00000504380 TXNRD3NBQ6F5E7 133 aa13.75□□□□□ -0.21
PDLIM7-212ENST00000504380 RHBDF2Q6PJF5 856 aa13.75□□□□□ -0.21
PDLIM7-212ENST00000504380 RHOT2Q8IXI1 618 aa13.75□□□□□ -0.21
PDLIM7-212ENST00000504380 LGI2Q8N0V4 545 aa13.75□□□□□ -0.21
PDLIM7-212ENST00000504380 PYROXD2Q8N2H3 581 aa13.75□□□□□ -0.21
PDLIM7-212ENST00000504380 FNIP1Q8TF40 1166 aa13.75□□□□□ -0.21
PDLIM7-212ENST00000504380 BTN2A3PQ96KV6 586 aa13.75□□□□□ -0.21
PDLIM7-212ENST00000504380 ECT2Q9H8V3 914 aa13.75□□□□□ -0.21
PDLIM7-212ENST00000504380 HEBP1Q9NRV9 189 aa13.75□□□□□ -0.21
PDLIM7-212ENST00000504380 PLK2Q9NYY3 685 aa13.75□□□□□ -0.21
PDLIM7-212ENST00000504380 TBC1D14Q9P2M4 693 aa13.75□□□□□ -0.21
PDLIM7-212ENST00000504380 SLC12A6Q9UHW9 1150 aa13.75□□□□□ -0.21
PDLIM7-212ENST00000504380 CA14Q9ULX7 337 aa13.75□□□□□ -0.21
PDLIM7-212ENST00000504380 PYCARDQ9ULZ3 195 aa13.75□□□□□ -0.21
PDLIM7-212ENST00000504380 DUSP12Q9UNI6 340 aa13.75□□□□□ -0.21
PDLIM7-212ENST00000504380 ZNF510Q9Y2H8 683 aa13.75□□□□□ -0.21
PDLIM7-212ENST00000504380 HS3ST4Q9Y661 456 aa13.75□□□□□ -0.21
PDLIM7-212ENST00000504380 MACROD2A1Z1Q3 448 aa13.74□□□□□ -0.21
PDLIM7-212ENST00000504380 SLC9A3R1O14745 358 aaPredicted RBP13.74□□□□□ -0.21
PDLIM7-212ENST00000504380 BUB1BO60566 1050 aaPredicted RBP13.74□□□□□ -0.21
PDLIM7-212ENST00000504380 MTA2O94776 668 aa13.74□□□□□ -0.21
PDLIM7-212ENST00000504380 MOCS3O95396 460 aa13.74□□□□□ -0.21
PDLIM7-212ENST00000504380 SLC2A3P11169 496 aa13.74□□□□□ -0.21
PDLIM7-212ENST00000504380 TACR2P21452 398 aa13.74□□□□□ -0.21
PDLIM7-212ENST00000504380 IL1R2P27930 398 aa13.74□□□□□ -0.21
PDLIM7-212ENST00000504380 ADRA1BP35368 520 aa13.74□□□□□ -0.21
PDLIM7-212ENST00000504380 GJC1P36383 396 aa13.74□□□□□ -0.21
PDLIM7-212ENST00000504380 ARHGAP25P42331 645 aa13.74□□□□□ -0.21
PDLIM7-212ENST00000504380 IRAK1P51617 712 aa13.74□□□□□ -0.21
PDLIM7-212ENST00000504380 TAS2R40P59535 323 aa13.74□□□□□ -0.21
PDLIM7-212ENST00000504380 PIGHQ14442 188 aaPredicted RBP13.74□□□□□ -0.21
PDLIM7-212ENST00000504380 TCEAL1Q15170 157 aa13.74□□□□□ -0.21
PDLIM7-212ENST00000504380 CA9Q16790 459 aa13.74□□□□□ -0.21
PDLIM7-212ENST00000504380 ANO4Q32M45 955 aa13.74□□□□□ -0.21
PDLIM7-212ENST00000504380 ADGRF1Q5T601 910 aa13.74□□□□□ -0.21
PDLIM7-212ENST00000504380 CYP4V2Q6ZWL3 525 aaPredicted RBP13.74□□□□□ -0.21
PDLIM7-212ENST00000504380 CHSY1Q86X52 802 aa13.74□□□□□ -0.21
PDLIM7-212ENST00000504380 CFAP52Q8N1V2 620 aa13.74□□□□□ -0.21
PDLIM7-212ENST00000504380 NAT16Q8N8M0 369 aa13.74□□□□□ -0.21
PDLIM7-212ENST00000504380 CSGALNACT1Q8TDX6 532 aa13.74□□□□□ -0.21
PDLIM7-212ENST00000504380 IRF7Q92985 503 aa13.74□□□□□ -0.21
PDLIM7-212ENST00000504380 ZWILCHQ9H900 591 aa13.74□□□□□ -0.21
PDLIM7-212ENST00000504380 SPHK2Q9NRA0 654 aa13.74□□□□□ -0.21
PDLIM7-212ENST00000504380 STIM2Q9P246 746 aa13.74□□□□□ -0.21
PDLIM7-212ENST00000504380 FZD10Q9ULW2 581 aa13.74□□□□□ -0.21
PDLIM7-212ENST00000504380 PPP2R2CQ9Y2T4 447 aa13.74□□□□□ -0.21
PDLIM7-212ENST00000504380 A0A0A6YYK5 440 aaPredicted RBP13.73□□□□□ -0.21
PDLIM7-212ENST00000504380 FAM86C2PA6NEL3 165 aa13.73□□□□□ -0.21
PDLIM7-212ENST00000504380 NEDD8-MDP1E9PL57 170 aa13.73□□□□□ -0.21
PDLIM7-212ENST00000504380 FAM72CH0Y354 149 aa13.73□□□□□ -0.21
PDLIM7-212ENST00000504380 NFATC1O95644 943 aa13.73□□□□□ -0.21
PDLIM7-212ENST00000504380 CCDC175P0C221 793 aa13.73□□□□□ -0.21
PDLIM7-212ENST00000504380 TNNT1P13805 278 aa13.73□□□□□ -0.21
PDLIM7-212ENST00000504380 DESP17661 470 aa13.73□□□□□ -0.21
PDLIM7-212ENST00000504380 RPS24P62847 133 aaKnown RBP13.73□□□□□ -0.21
PDLIM7-212ENST00000504380 KIF5AQ12840 1032 aa13.73□□□□□ -0.21
PDLIM7-212ENST00000504380 AUHQ13825 339 aaKnown RBP13.73□□□□□ -0.21
PDLIM7-212ENST00000504380 SMTNL2Q2TAL5 461 aa13.73□□□□□ -0.21
PDLIM7-212ENST00000504380 GAB4Q2WGN9 574 aa13.73□□□□□ -0.21
PDLIM7-212ENST00000504380 ITPRIPL2Q3MIP1 535 aa13.73□□□□□ -0.21
PDLIM7-212ENST00000504380 ATP13A4Q4VNC1 1196 aa13.73□□□□□ -0.21
PDLIM7-212ENST00000504380 KCNT1Q5JUK3 1230 aa13.73□□□□□ -0.21
PDLIM7-212ENST00000504380 FAM72AQ5TYM5 149 aa13.73□□□□□ -0.21
PDLIM7-212ENST00000504380 FAM72DQ6L9T8 149 aa13.73□□□□□ -0.21
PDLIM7-212ENST00000504380 SLFN11Q7Z7L1 901 aa13.73□□□□□ -0.21
PDLIM7-212ENST00000504380 C12orf40Q86WS4 652 aa13.73□□□□□ -0.21
PDLIM7-212ENST00000504380 FAM72BQ86X60 149 aa13.73□□□□□ -0.21
PDLIM7-212ENST00000504380 CIR1Q86X95 450 aaPredicted RBP13.73□□□□□ -0.21
PDLIM7-212ENST00000504380 FAM217AQ8IXS0 508 aa13.73□□□□□ -0.21
PDLIM7-212ENST00000504380 CPA6Q8N4T0 437 aa13.73□□□□□ -0.21
PDLIM7-212ENST00000504380 NIPA2Q8N8Q9 360 aa13.73□□□□□ -0.21
PDLIM7-212ENST00000504380 TPCN2Q8NHX9 752 aa13.73□□□□□ -0.21
PDLIM7-212ENST00000504380 ATP2A3Q93084 1043 aa13.73□□□□□ -0.21
PDLIM7-212ENST00000504380 IGSF8Q969P0 613 aa13.73□□□□□ -0.21
PDLIM7-212ENST00000504380 AZIN2Q96A70 460 aa13.73□□□□□ -0.21
PDLIM7-212ENST00000504380 PRICKLE1Q96MT3 831 aaPredicted RBP13.73□□□□□ -0.21
PDLIM7-212ENST00000504380 PRMT1Q99873 361 aaKnown RBP13.73□□□□□ -0.21
PDLIM7-212ENST00000504380 SNRNP25Q9BV90 132 aaKnown RBP13.73□□□□□ -0.21
PDLIM7-212ENST00000504380 LZTFL1Q9NQ48 299 aa13.73□□□□□ -0.21
PDLIM7-212ENST00000504380 SLC2A4RGQ9NR83 387 aa13.73□□□□□ -0.21
PDLIM7-212ENST00000504380 STOML2Q9UJZ1 356 aa13.73□□□□□ -0.21
PDLIM7-212ENST00000504380 VANGL2Q9ULK5 521 aa13.73□□□□□ -0.21
PDLIM7-212ENST00000504380 CLEC4EQ9ULY5 219 aa13.73□□□□□ -0.21
PDLIM7-212ENST00000504380 GUCA1BQ9UMX6 200 aa13.73□□□□□ -0.21
PDLIM7-212ENST00000504380 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.73□□□□□ -0.21
PDLIM7-212ENST00000504380 COL4A2P08572 1712 aa13.73□□□□□ -0.21
PDLIM7-212ENST00000504380 BTNL10A8MVZ5 291 aa13.72□□□□□ -0.21
PDLIM7-212ENST00000504380 GFRA2O00451 464 aa13.72□□□□□ -0.21
PDLIM7-212ENST00000504380 TRIM24O15164 1050 aa13.72□□□□□ -0.21
PDLIM7-212ENST00000504380 PRPSAP2O60256 369 aa13.72□□□□□ -0.21
PDLIM7-212ENST00000504380 TBL1XO60907 577 aa13.72□□□□□ -0.21
PDLIM7-212ENST00000504380 SRGAP2O75044 1071 aa13.72□□□□□ -0.21
PDLIM7-212ENST00000504380 LATS1O95835 1130 aa13.72□□□□□ -0.21
PDLIM7-212ENST00000504380 ADH5P11766 374 aa13.72□□□□□ -0.21
PDLIM7-212ENST00000504380 CD72P21854 359 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms