RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 FBRSQ9HAH7 460 aa13.16□□□□□ -0.3
LSM6-204ENST00000504181 PARVGQ9HBI0 331 aa13.16□□□□□ -0.3
LSM6-204ENST00000504181 PRSS16Q9NQE7 514 aa13.16□□□□□ -0.3
LSM6-204ENST00000504181 FBXL12Q9NXK8 326 aa13.16□□□□□ -0.3
LSM6-204ENST00000504181 RBAKQ9NYW8 714 aaPredicted RBP13.16□□□□□ -0.3
LSM6-204ENST00000504181 NUDT5Q9UKK9 219 aa13.16□□□□□ -0.3
LSM6-204ENST00000504181 LRRC72A6NJI9 287 aa13.15□□□□□ -0.3
LSM6-204ENST00000504181 JAK2O60674 1132 aa13.15□□□□□ -0.3
LSM6-204ENST00000504181 TNFSF15O95150 251 aa13.15□□□□□ -0.3
LSM6-204ENST00000504181 CKMT1AP12532 417 aa13.15□□□□□ -0.3
LSM6-204ENST00000504181 CLCN6P51797 869 aa13.15□□□□□ -0.3
LSM6-204ENST00000504181 DHX8Q14562 1220 aaKnown RBP13.15□□□□□ -0.3
LSM6-204ENST00000504181 CLEC14AQ86T13 490 aa13.15□□□□□ -0.3
LSM6-204ENST00000504181 GPBP1Q86WP2 473 aa13.15□□□□□ -0.3
LSM6-204ENST00000504181 SLC25A45Q8N413 288 aa13.15□□□□□ -0.3
LSM6-204ENST00000504181 ARL14Q8N4G2 192 aa13.15□□□□□ -0.3
LSM6-204ENST00000504181 ZNF564Q8TBZ8 553 aaPredicted RBP13.15□□□□□ -0.3
LSM6-204ENST00000504181 MAPK15Q8TD08 544 aa13.15□□□□□ -0.3
LSM6-204ENST00000504181 NOC3LQ8WTT2 800 aaKnown RBP13.15□□□□□ -0.3
LSM6-204ENST00000504181 FIZ1Q96SL8 496 aa13.15□□□□□ -0.3
LSM6-204ENST00000504181 TM6SF1Q9BZW5 370 aa13.15□□□□□ -0.3
LSM6-204ENST00000504181 PABPC3Q9H361 631 aaKnown RBP13.15□□□□□ -0.3
LSM6-204ENST00000504181 TLR8Q9NR97 1041 aaKnown RBP13.15□□□□□ -0.3
LSM6-204ENST00000504181 IL37Q9NZH6 218 aa13.15□□□□□ -0.3
LSM6-204ENST00000504181 PCDHGA8Q9Y5G5 932 aa13.15□□□□□ -0.3
LSM6-204ENST00000504181 ENTPD2Q9Y5L3 495 aa13.15□□□□□ -0.3
LSM6-204ENST00000504181 CSMD1Q96PZ7 3565 aa13.15□□□□□ -0.3
LSM6-204ENST00000504181 SETD2Q9BYW2 2564 aaPredicted RBP13.15□□□□□ -0.3
LSM6-204ENST00000504181 A0A1W2PP55 124 aa13.14□□□□□ -0.31
LSM6-204ENST00000504181 FAM92AA1XBS5 289 aa13.14□□□□□ -0.31
LSM6-204ENST00000504181 STC2O76061 302 aa13.14□□□□□ -0.31
LSM6-204ENST00000504181 THEGLP0DJG4 465 aa13.14□□□□□ -0.31
LSM6-204ENST00000504181 TGM2P21980 687 aa13.14□□□□□ -0.31
LSM6-204ENST00000504181 ZNF131P52739 623 aa13.14□□□□□ -0.31
LSM6-204ENST00000504181 CLCA4Q14CN2 919 aa13.14□□□□□ -0.31
LSM6-204ENST00000504181 NCAPHQ15003 741 aa13.14□□□□□ -0.31
LSM6-204ENST00000504181 TGIF1Q15583 401 aa13.14□□□□□ -0.31
LSM6-204ENST00000504181 HYIQ5T013 277 aa13.14□□□□□ -0.31
LSM6-204ENST00000504181 USP30Q70CQ3 517 aa13.14□□□□□ -0.31
LSM6-204ENST00000504181 FAM35AQ86V20 835 aa13.14□□□□□ -0.31
LSM6-204ENST00000504181 B3GALNT2Q8NCR0 500 aa13.14□□□□□ -0.31
LSM6-204ENST00000504181 OR2T34Q8NGX1 318 aa13.14□□□□□ -0.31
LSM6-204ENST00000504181 GOLGA1Q92805 767 aa13.14□□□□□ -0.31
LSM6-204ENST00000504181 ANKRD36BP1Q96IX9 119 aa13.14□□□□□ -0.31
LSM6-204ENST00000504181 CDK5RAP3Q96JB5 506 aa13.14□□□□□ -0.31
LSM6-204ENST00000504181 PHF12Q96QT6 1004 aa13.14□□□□□ -0.31
LSM6-204ENST00000504181 MED10Q9BTT4 135 aa13.14□□□□□ -0.31
LSM6-204ENST00000504181 NEUROG2Q9H2A3 272 aa13.14□□□□□ -0.31
LSM6-204ENST00000504181 MTG2Q9H4K7 406 aa13.14□□□□□ -0.31
LSM6-204ENST00000504181 PDE11AQ9HCR9 933 aa13.14□□□□□ -0.31
LSM6-204ENST00000504181 DMAP1Q9NPF5 467 aaPredicted RBP13.14□□□□□ -0.31
LSM6-204ENST00000504181 UCKL1Q9NWZ5 548 aa13.14□□□□□ -0.31
LSM6-204ENST00000504181 GEMIN8Q9NWZ8 242 aaKnown RBP13.14□□□□□ -0.31
LSM6-204ENST00000504181 OSER1Q9NX31 292 aa13.14□□□□□ -0.31
LSM6-204ENST00000504181 PLA2G4CQ9UP65 541 aa13.14□□□□□ -0.31
LSM6-204ENST00000504181 ATP8B3O60423 1300 aa13.13□□□□□ -0.31
LSM6-204ENST00000504181 GOLGA8IPA6NC78 632 aa13.13□□□□□ -0.31
LSM6-204ENST00000504181 GOLGA8JA6NMD2 632 aa13.13□□□□□ -0.31
LSM6-204ENST00000504181 TIMM44O43615 452 aa13.13□□□□□ -0.31
LSM6-204ENST00000504181 KLKB1P03952 638 aa13.13□□□□□ -0.31
LSM6-204ENST00000504181 GP1BAP07359 652 aa13.13□□□□□ -0.31
LSM6-204ENST00000504181 CHKAP35790 457 aa13.13□□□□□ -0.31
LSM6-204ENST00000504181 TRAPPC10P48553 1259 aa13.13□□□□□ -0.31
LSM6-204ENST00000504181 CCR5P51681 352 aa13.13□□□□□ -0.31
LSM6-204ENST00000504181 CYP4F2P78329 520 aa13.13□□□□□ -0.31
LSM6-204ENST00000504181 MFSD2AQ8NA29 543 aa13.13□□□□□ -0.31
LSM6-204ENST00000504181 RDH13Q8NBN7 331 aa13.13□□□□□ -0.31
LSM6-204ENST00000504181 IFI44Q8TCB0 444 aa13.13□□□□□ -0.31
LSM6-204ENST00000504181 APOLD1Q96LR9 279 aa13.13□□□□□ -0.31
LSM6-204ENST00000504181 CYLDQ9NQC7 956 aa13.13□□□□□ -0.31
LSM6-204ENST00000504181 LY6G6EA0A0G2JKS1 128 aa13.12□□□□□ -0.31
LSM6-204ENST00000504181 A8MXQ7 604 aa13.12□□□□□ -0.31
LSM6-204ENST00000504181 MID1O15344 667 aa13.12□□□□□ -0.31
LSM6-204ENST00000504181 LZTS3O60299 673 aaPredicted RBP13.12□□□□□ -0.31
LSM6-204ENST00000504181 RNASEH2AO75792 299 aaKnown RBP13.12□□□□□ -0.31
LSM6-204ENST00000504181 CYBBP04839 570 aa13.12□□□□□ -0.31
LSM6-204ENST00000504181 KRT18P05783 430 aaKnown RBP13.12□□□□□ -0.31
LSM6-204ENST00000504181 HMBSP08397 361 aa13.12□□□□□ -0.31
LSM6-204ENST00000504181 DGKAP23743 735 aa13.12□□□□□ -0.31
LSM6-204ENST00000504181 ABCD1P33897 745 aa13.12□□□□□ -0.31
LSM6-204ENST00000504181 PLA2G4AP47712 749 aa13.12□□□□□ -0.31
LSM6-204ENST00000504181 EHHADHQ08426 723 aa13.12□□□□□ -0.31
LSM6-204ENST00000504181 POSTNQ15063 836 aa13.12□□□□□ -0.31
LSM6-204ENST00000504181 NAPEPLDQ6IQ20 393 aa13.12□□□□□ -0.31
LSM6-204ENST00000504181 CHST9Q7L1S5 443 aa13.12□□□□□ -0.31
LSM6-204ENST00000504181 OR5B17Q8NGF7 314 aa13.12□□□□□ -0.31
LSM6-204ENST00000504181 DDI1Q8WTU0 396 aa13.12□□□□□ -0.31
LSM6-204ENST00000504181 ARRDC3Q96B67 414 aa13.12□□□□□ -0.31
LSM6-204ENST00000504181 RSPH9Q9H1X1 276 aaPredicted RBP13.12□□□□□ -0.31
LSM6-204ENST00000504181 CAAP1Q9H8G2 361 aa13.12□□□□□ -0.31
LSM6-204ENST00000504181 COMMD8Q9NX08 183 aa13.12□□□□□ -0.31
LSM6-204ENST00000504181 NOL7Q9UMY1 257 aaKnown RBP13.12□□□□□ -0.31
LSM6-204ENST00000504181 SCML1Q9UN30 329 aa13.12□□□□□ -0.31
LSM6-204ENST00000504181 PLAAQ9Y263 795 aa13.12□□□□□ -0.31
LSM6-204ENST00000504181 U3KQA8 63 aa13.12□□□□□ -0.31
LSM6-204ENST00000504181 OTOGQ6ZRI0 2925 aa13.12□□□□□ -0.31
LSM6-204ENST00000504181 NOBOXO60393 691 aa13.11□□□□□ -0.31
LSM6-204ENST00000504181 TACC1O75410 805 aa13.11□□□□□ -0.31
LSM6-204ENST00000504181 GIMD1P0DJR0 217 aa13.11□□□□□ -0.31
LSM6-204ENST00000504181 RARGP13631 454 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms