RNA–Protein interactions for RNA: ENST00000498722.2

LMNA-217, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 1,348 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-217ENST00000498722 ADH1CP00326 375 aa16.79■□□□□ 0.28
LMNA-217ENST00000498722 ERBB2P04626 1255 aa16.79■□□□□ 0.28
LMNA-217ENST00000498722 CYP17A1P05093 508 aa16.79■□□□□ 0.28
LMNA-217ENST00000498722 GJA4P35212 333 aa16.79■□□□□ 0.28
LMNA-217ENST00000498722 ANO4Q32M45 955 aa16.79■□□□□ 0.28
LMNA-217ENST00000498722 PTPN20Q4JDL3 420 aa16.79■□□□□ 0.28
LMNA-217ENST00000498722 TXNDC11Q6PKC3 985 aa16.79■□□□□ 0.28
LMNA-217ENST00000498722 FAM183BPQ6ZVS7 135 aa16.79■□□□□ 0.28
LMNA-217ENST00000498722 CCDC105Q8IYK2 499 aa16.79■□□□□ 0.28
LMNA-217ENST00000498722 KIAA1958Q8N8K9 716 aa16.79■□□□□ 0.28
LMNA-217ENST00000498722 NAALADL1Q9UQQ1 740 aa16.79■□□□□ 0.28
LMNA-217ENST00000498722 CACNA1IQ9P0X4 2223 aa16.79■□□□□ 0.28
LMNA-217ENST00000498722 MIF4GDA9UHW6 222 aaKnown RBP16.78■□□□□ 0.28
LMNA-217ENST00000498722 GRAP2O75791 330 aa16.78■□□□□ 0.28
LMNA-217ENST00000498722 CORO1AP31146 461 aaKnown RBP16.78■□□□□ 0.28
LMNA-217ENST00000498722 HARS2P49590 506 aaKnown RBP16.78■□□□□ 0.28
LMNA-217ENST00000498722 YWHAZP63104 245 aaKnown RBP16.78■□□□□ 0.28
LMNA-217ENST00000498722 DHCR24Q15392 516 aa16.78■□□□□ 0.28
LMNA-217ENST00000498722 EFHC1Q5JVL4 640 aa16.78■□□□□ 0.28
LMNA-217ENST00000498722 LY6G5CQ5SRR4 150 aa16.78■□□□□ 0.28
LMNA-217ENST00000498722 HTR3DQ70Z44 454 aa16.78■□□□□ 0.28
LMNA-217ENST00000498722 ZNF572Q7Z3I7 529 aaPredicted RBP16.78■□□□□ 0.28
LMNA-217ENST00000498722 DENND1CQ8IV53 801 aa16.78■□□□□ 0.28
LMNA-217ENST00000498722 ADGRG2Q8IZP9 1017 aa16.78■□□□□ 0.28
LMNA-217ENST00000498722 EXOC4Q96A65 974 aa16.78■□□□□ 0.28
LMNA-217ENST00000498722 PLD4Q96BZ4 506 aa16.78■□□□□ 0.28
LMNA-217ENST00000498722 PIWIL1Q96J94 861 aaKnown RBP16.78■□□□□ 0.28
LMNA-217ENST00000498722 CAPZA3Q96KX2 299 aa16.78■□□□□ 0.28
LMNA-217ENST00000498722 DCLK3Q9C098 648 aa16.78■□□□□ 0.28
LMNA-217ENST00000498722 POPDC2Q9HBU9 364 aa16.78■□□□□ 0.28
LMNA-217ENST00000498722 MYO18AQ92614 2054 aaKnown RBP16.78■□□□□ 0.28
LMNA-217ENST00000498722 SHISA7A6NL88 538 aa16.77■□□□□ 0.28
LMNA-217ENST00000498722 ATMINO43313 823 aaPredicted RBP16.77■□□□□ 0.28
LMNA-217ENST00000498722 ADH5P11766 374 aa16.77■□□□□ 0.28
LMNA-217ENST00000498722 MMP8P22894 467 aa16.77■□□□□ 0.28
LMNA-217ENST00000498722 RNASE9P60153 205 aaKnown RBP16.77■□□□□ 0.28
LMNA-217ENST00000498722 GRSF1Q12849 480 aaKnown RBP eCLIP16.77■□□□□ 0.28
LMNA-217ENST00000498722 TAF5Q15542 800 aa16.77■□□□□ 0.28
LMNA-217ENST00000498722 C2CD6Q53TS8 623 aa16.77■□□□□ 0.28
LMNA-217ENST00000498722 DCAF6Q58WW2 860 aa16.77■□□□□ 0.28
LMNA-217ENST00000498722 MSANTD2Q6P1R3 559 aa16.77■□□□□ 0.28
LMNA-217ENST00000498722 TPGS1Q6ZTW0 290 aa16.77■□□□□ 0.28
LMNA-217ENST00000498722 CREG2Q8IUH2 290 aa16.77■□□□□ 0.28
LMNA-217ENST00000498722 ADAM32Q8TC27 787 aa16.77■□□□□ 0.28
LMNA-217ENST00000498722 C18orf8Q96DM3 657 aa16.77■□□□□ 0.28
LMNA-217ENST00000498722 HES6Q96HZ4 224 aa16.77■□□□□ 0.28
LMNA-217ENST00000498722 P2RY13Q9BPV8 354 aa16.77■□□□□ 0.28
LMNA-217ENST00000498722 C11orf70Q9BRQ4 267 aa16.77■□□□□ 0.28
LMNA-217ENST00000498722 OSBPL6Q9BZF3 934 aa16.77■□□□□ 0.28
LMNA-217ENST00000498722 ZNF510Q9Y2H8 683 aa16.77■□□□□ 0.28
LMNA-217ENST00000498722 HBS1LQ9Y450 684 aaKnown RBP16.77■□□□□ 0.28
LMNA-217ENST00000498722 SYNJ2BP-COX16A0A087WUM0 186 aa16.76■□□□□ 0.27
LMNA-217ENST00000498722 GOLGA8SH3BPF8 625 aa16.76■□□□□ 0.27
LMNA-217ENST00000498722 ZNF185O15231 689 aa16.76■□□□□ 0.27
LMNA-217ENST00000498722 HSF2BPO75031 334 aa16.76■□□□□ 0.27
LMNA-217ENST00000498722 RRM1P23921 792 aa16.76■□□□□ 0.27
LMNA-217ENST00000498722 TBX4P57082 545 aa16.76■□□□□ 0.27
LMNA-217ENST00000498722 SLC6A3Q01959 620 aa16.76■□□□□ 0.27
LMNA-217ENST00000498722 PTP4A2Q12974 167 aa16.76■□□□□ 0.27
LMNA-217ENST00000498722 LRRC32Q14392 662 aa16.76■□□□□ 0.27
LMNA-217ENST00000498722 MESDQ14696 234 aa16.76■□□□□ 0.27
LMNA-217ENST00000498722 TEX35Q5T0J7 233 aa16.76■□□□□ 0.27
LMNA-217ENST00000498722 FAM102AQ5T9C2 384 aaPredicted RBP16.76■□□□□ 0.27
LMNA-217ENST00000498722 SYPL2Q5VXT5 272 aa16.76■□□□□ 0.27
LMNA-217ENST00000498722 NAIF1Q69YI7 327 aaPredicted RBP16.76■□□□□ 0.27
LMNA-217ENST00000498722 PLEKHA7Q6IQ23 1121 aa16.76■□□□□ 0.27
LMNA-217ENST00000498722 RHBDF2Q6PJF5 856 aa16.76■□□□□ 0.27
LMNA-217ENST00000498722 OLFML1Q6UWY5 402 aa16.76■□□□□ 0.27
LMNA-217ENST00000498722 MMS22LQ6ZRQ5 1243 aa16.76■□□□□ 0.27
LMNA-217ENST00000498722 UBL4BQ8N7F7 174 aa16.76■□□□□ 0.27
LMNA-217ENST00000498722 LRRN4CLQ8ND94 238 aa16.76■□□□□ 0.27
LMNA-217ENST00000498722 DQX1Q8TE96 717 aaKnown RBP16.76■□□□□ 0.27
LMNA-217ENST00000498722 CD101Q93033 1021 aa16.76■□□□□ 0.27
LMNA-217ENST00000498722 BHMTQ93088 406 aa16.76■□□□□ 0.27
LMNA-217ENST00000498722 CHFRQ96EP1 664 aa16.76■□□□□ 0.27
LMNA-217ENST00000498722 SERPINB11Q96P15 392 aa16.76■□□□□ 0.27
LMNA-217ENST00000498722 BBS2Q9BXC9 721 aa16.76■□□□□ 0.27
LMNA-217ENST00000498722 FAM204AQ9H8W3 233 aa16.76■□□□□ 0.27
LMNA-217ENST00000498722 LMAN1LQ9HAT1 526 aa16.76■□□□□ 0.27
LMNA-217ENST00000498722 SPHK2Q9NRA0 654 aa16.76■□□□□ 0.27
LMNA-217ENST00000498722 RBM12Q9NTZ6 932 aaKnown RBP16.76■□□□□ 0.27
LMNA-217ENST00000498722 PARVAQ9NVD7 372 aa16.76■□□□□ 0.27
LMNA-217ENST00000498722 COX16Q9P0S2 106 aa16.76■□□□□ 0.27
LMNA-217ENST00000498722 WDR35Q9P2L0 1181 aa16.76■□□□□ 0.27
LMNA-217ENST00000498722 PACSIN2Q9UNF0 486 aaPredicted RBP16.76■□□□□ 0.27
LMNA-217ENST00000498722 ALG6Q9Y672 507 aa16.76■□□□□ 0.27
LMNA-217ENST00000498722 NEDD8-MDP1E9PL57 170 aa16.75■□□□□ 0.27
LMNA-217ENST00000498722 KCNK3O14649 394 aa16.75■□□□□ 0.27
LMNA-217ENST00000498722 GREM1O60565 184 aa16.75■□□□□ 0.27
LMNA-217ENST00000498722 KLKB1P03952 638 aa16.75■□□□□ 0.27
LMNA-217ENST00000498722 FYNP06241 537 aa16.75■□□□□ 0.27
LMNA-217ENST00000498722 SLC1A1P43005 524 aa16.75■□□□□ 0.27
LMNA-217ENST00000498722 GALK1P51570 392 aa16.75■□□□□ 0.27
LMNA-217ENST00000498722 GAD2Q05329 585 aa16.75■□□□□ 0.27
LMNA-217ENST00000498722 TRIP4Q15650 581 aaPredicted RBP16.75■□□□□ 0.27
LMNA-217ENST00000498722 ERCC6LQ2NKX8 1250 aa16.75■□□□□ 0.27
LMNA-217ENST00000498722 Q6ZNB5 142 aa16.75■□□□□ 0.27
LMNA-217ENST00000498722 TAC4Q86UU9 113 aa16.75■□□□□ 0.27
LMNA-217ENST00000498722 TMEM25Q86YD3 366 aa16.75■□□□□ 0.27
LMNA-217ENST00000498722 ZDHHC17Q8IUH5 632 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms