RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 DDIASQ8IXT1 998 aa4.48□□□□□ -1.69
SMC4-227ENST00000497984 LAS2Q8IYD9 372 aa4.48□□□□□ -1.69
SMC4-227ENST00000497984 CLASRPQ8N2M8 674 aaKnown RBP4.48□□□□□ -1.69
SMC4-227ENST00000497984 MAGEB6Q8N7X4 407 aa4.48□□□□□ -1.69
SMC4-227ENST00000497984 OR52L2PQ8NGH6 319 aa4.48□□□□□ -1.69
SMC4-227ENST00000497984 TMEM174Q8WUU8 243 aa4.48□□□□□ -1.69
SMC4-227ENST00000497984 LPAR1Q92633 364 aa4.48□□□□□ -1.69
SMC4-227ENST00000497984 INPP5DQ92835 1189 aa4.48□□□□□ -1.69
SMC4-227ENST00000497984 STRBPQ96SI9 672 aaKnown RBP4.48□□□□□ -1.69
SMC4-227ENST00000497984 SF3B5Q9BWJ5 86 aaKnown RBP4.48□□□□□ -1.69
SMC4-227ENST00000497984 ZBTB26Q9HCK0 441 aa4.48□□□□□ -1.69
SMC4-227ENST00000497984 ERVK-5Q9HDB9 667 aa4.48□□□□□ -1.69
SMC4-227ENST00000497984 IPO11Q9UI26 975 aaKnown RBP4.48□□□□□ -1.69
SMC4-227ENST00000497984 LOC105371045A0A1W2PR82 267 aa4.47□□□□□ -1.69
SMC4-227ENST00000497984 ERVV-2B6SEH9 535 aa4.47□□□□□ -1.69
SMC4-227ENST00000497984 MGEA5O60502 916 aa4.47□□□□□ -1.69
SMC4-227ENST00000497984 RFX2P48378 723 aa4.47□□□□□ -1.69
SMC4-227ENST00000497984 EGR4Q05215 589 aa4.47□□□□□ -1.69
SMC4-227ENST00000497984 GPS1Q13098 491 aa4.47□□□□□ -1.69
SMC4-227ENST00000497984 NFATC4Q14934 902 aa4.47□□□□□ -1.69
SMC4-227ENST00000497984 ELF2Q15723 593 aa4.47□□□□□ -1.69
SMC4-227ENST00000497984 SLC4A8Q2Y0W8 1093 aa4.47□□□□□ -1.69
SMC4-227ENST00000497984 NXNQ6DKJ4 435 aa4.47□□□□□ -1.69
SMC4-227ENST00000497984 ISM2Q6H9L7 571 aa4.47□□□□□ -1.69
SMC4-227ENST00000497984 ACSM6Q6P461 480 aa4.47□□□□□ -1.69
SMC4-227ENST00000497984 TRILQ7L0X0 811 aa4.47□□□□□ -1.69
SMC4-227ENST00000497984 SRGAP1Q7Z6B7 1085 aa4.47□□□□□ -1.69
SMC4-227ENST00000497984 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.47□□□□□ -1.69
SMC4-227ENST00000497984 ABHD5Q8WTS1 349 aa4.47□□□□□ -1.69
SMC4-227ENST00000497984 DNASE2BQ8WZ79 361 aa4.47□□□□□ -1.69
SMC4-227ENST00000497984 HTATIP2Q9BUP3 242 aa4.47□□□□□ -1.69
SMC4-227ENST00000497984 CDCP1Q9H5V8 836 aa4.47□□□□□ -1.69
SMC4-227ENST00000497984 RPS10-NUDT3A0A1W2PQS6 291 aa4.46□□□□□ -1.7
SMC4-227ENST00000497984 M0QZQ0 153 aa4.46□□□□□ -1.7
SMC4-227ENST00000497984 PODXLO00592 558 aa4.46□□□□□ -1.7
SMC4-227ENST00000497984 SCGB1D2O95969 90 aa4.46□□□□□ -1.7
SMC4-227ENST00000497984 RFPL3SP0C7P2 107 aa4.46□□□□□ -1.7
SMC4-227ENST00000497984 MMP8P22894 467 aa4.46□□□□□ -1.7
SMC4-227ENST00000497984 SLC8A1P32418 973 aa4.46□□□□□ -1.7
SMC4-227ENST00000497984 FAM193AP78312 1265 aa4.46□□□□□ -1.7
SMC4-227ENST00000497984 ANXA2RQ3ZCQ2 193 aa4.46□□□□□ -1.7
SMC4-227ENST00000497984 GLE1Q53GS7 698 aaKnown RBP4.46□□□□□ -1.7
SMC4-227ENST00000497984 C9orf50Q5SZB4 431 aa4.46□□□□□ -1.7
SMC4-227ENST00000497984 RRAGBQ5VZM2 374 aa4.46□□□□□ -1.7
SMC4-227ENST00000497984 CRTC1Q6UUV9 634 aa4.46□□□□□ -1.7
SMC4-227ENST00000497984 CUZD1Q86UP6 607 aa4.46□□□□□ -1.7
SMC4-227ENST00000497984 TCEAL8Q8IYN2 117 aa4.46□□□□□ -1.7
SMC4-227ENST00000497984 ELP5Q8TE02 316 aa4.46□□□□□ -1.7
SMC4-227ENST00000497984 GLMPQ8WWB7 406 aa4.46□□□□□ -1.7
SMC4-227ENST00000497984 OVCA2Q8WZ82 227 aa4.46□□□□□ -1.7
SMC4-227ENST00000497984 BTBD1Q9H0C5 482 aa4.46□□□□□ -1.7
SMC4-227ENST00000497984 SPAG4Q9NPE6 437 aa4.46□□□□□ -1.7
SMC4-227ENST00000497984 WNT16Q9UBV4 365 aa4.46□□□□□ -1.7
SMC4-227ENST00000497984 LAMP3Q9UQV4 416 aa4.46□□□□□ -1.7
SMC4-227ENST00000497984 INSL5Q9Y5Q6 135 aa4.46□□□□□ -1.7
SMC4-227ENST00000497984 CLEC18AA5D8T8 446 aa4.45□□□□□ -1.7
SMC4-227ENST00000497984 MDM4O15151 490 aa4.45□□□□□ -1.7
SMC4-227ENST00000497984 KCNQ3O43525 872 aa4.45□□□□□ -1.7
SMC4-227ENST00000497984 ACAA1P09110 424 aaPredicted RBP4.45□□□□□ -1.7
SMC4-227ENST00000497984 ALADP13716 330 aa4.45□□□□□ -1.7
SMC4-227ENST00000497984 RPL17P18621 184 aaKnown RBP4.45□□□□□ -1.7
SMC4-227ENST00000497984 MST1P26927 711 aa4.45□□□□□ -1.7
SMC4-227ENST00000497984 GAD2Q05329 585 aa4.45□□□□□ -1.7
SMC4-227ENST00000497984 SEMA3BQ13214 749 aa4.45□□□□□ -1.7
SMC4-227ENST00000497984 SEMA5AQ13591 1074 aa4.45□□□□□ -1.7
SMC4-227ENST00000497984 INO80DQ53TQ3 878 aaPredicted RBP4.45□□□□□ -1.7
SMC4-227ENST00000497984 KIAA1755Q5JYT7 1200 aa4.45□□□□□ -1.7
SMC4-227ENST00000497984 DGKKQ5KSL6 1271 aa4.45□□□□□ -1.7
SMC4-227ENST00000497984 SLC39A5Q6ZMH5 540 aa4.45□□□□□ -1.7
SMC4-227ENST00000497984 CLEC18CQ8NCF0 446 aa4.45□□□□□ -1.7
SMC4-227ENST00000497984 NR4A3Q92570 626 aa4.45□□□□□ -1.7
SMC4-227ENST00000497984 TRIM2Q9C040 744 aa4.45□□□□□ -1.7
SMC4-227ENST00000497984 SIRT3Q9NTG7 399 aaPredicted RBP4.45□□□□□ -1.7
SMC4-227ENST00000497984 PLK2Q9NYY3 685 aa4.45□□□□□ -1.7
SMC4-227ENST00000497984 A0A087WYN8 130 aa4.44□□□□□ -1.7
SMC4-227ENST00000497984 CCNT2O60583 730 aaKnown RBP4.44□□□□□ -1.7
SMC4-227ENST00000497984 SLC5A2P31639 672 aa4.44□□□□□ -1.7
SMC4-227ENST00000497984 ENTPD1P49961 510 aa4.44□□□□□ -1.7
SMC4-227ENST00000497984 GRM3Q14832 879 aa4.44□□□□□ -1.7
SMC4-227ENST00000497984 NFE2Q16621 373 aaPredicted RBP4.44□□□□□ -1.7
SMC4-227ENST00000497984 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.44□□□□□ -1.7
SMC4-227ENST00000497984 ODR4Q5SWX8 454 aa4.44□□□□□ -1.7
SMC4-227ENST00000497984 NADSYN1Q6IA69 706 aa4.44□□□□□ -1.7
SMC4-227ENST00000497984 CCDC144NLQ6NUI1 221 aa4.44□□□□□ -1.7
SMC4-227ENST00000497984 TLDC1Q6P9B6 456 aa4.44□□□□□ -1.7
SMC4-227ENST00000497984 PIK3AP1Q6ZUJ8 805 aa4.44□□□□□ -1.7
SMC4-227ENST00000497984 NR2C2APQ86WQ0 139 aa4.44□□□□□ -1.7
SMC4-227ENST00000497984 WFIKKN2Q8TEU8 576 aa4.44□□□□□ -1.7
SMC4-227ENST00000497984 CENPIQ92674 756 aaPredicted RBP4.44□□□□□ -1.7
SMC4-227ENST00000497984 PHF21BQ96EK2 531 aa4.44□□□□□ -1.7
SMC4-227ENST00000497984 URB1-AS1Q96HZ7 61 aa4.44□□□□□ -1.7
SMC4-227ENST00000497984 CLMNQ96JQ2 1002 aa4.44□□□□□ -1.7
SMC4-227ENST00000497984 GPR78Q96P69 363 aa4.44□□□□□ -1.7
SMC4-227ENST00000497984 SLITRK1Q96PX8 696 aa4.44□□□□□ -1.7
SMC4-227ENST00000497984 ELOVL1Q9BW60 279 aa4.44□□□□□ -1.7
SMC4-227ENST00000497984 UNKQ9C0B0 810 aaKnown RBP4.44□□□□□ -1.7
SMC4-227ENST00000497984 TASP1Q9H6P5 420 aa4.44□□□□□ -1.7
SMC4-227ENST00000497984 MAP6D1Q9H9H5 199 aa4.44□□□□□ -1.7
SMC4-227ENST00000497984 OR2W5A6NFC9 320 aa4.43□□□□□ -1.7
SMC4-227ENST00000497984 CLCA1A8K7I4 914 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms