RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 EXD1Q8NHP7 514 aa20.44■□□□□ 0.86
SCAMP3-209ENST00000497470 OSCP1Q8WVF1 389 aa20.44■□□□□ 0.86
SCAMP3-209ENST00000497470 SNRNP25Q9BV90 132 aaKnown RBP20.44■□□□□ 0.86
SCAMP3-209ENST00000497470 SMPD4Q9NXE4 827 aa20.44■□□□□ 0.86
SCAMP3-209ENST00000497470 AP4E1Q9UPM8 1137 aa20.44■□□□□ 0.86
SCAMP3-209ENST00000497470 CCL26Q9Y258 94 aa20.44■□□□□ 0.86
SCAMP3-209ENST00000497470 DRGXA6NNA5 263 aa20.43■□□□□ 0.86
SCAMP3-209ENST00000497470 PRLRP16471 622 aa20.43■□□□□ 0.86
SCAMP3-209ENST00000497470 ARSEP51690 589 aa20.43■□□□□ 0.86
SCAMP3-209ENST00000497470 ATXN1P54253 815 aaKnown RBP20.43■□□□□ 0.86
SCAMP3-209ENST00000497470 RWDD2BP57060 319 aa20.43■□□□□ 0.86
SCAMP3-209ENST00000497470 MS4A13Q5J8X5 152 aa20.43■□□□□ 0.86
SCAMP3-209ENST00000497470 TANGO2Q6ICL3 276 aa20.43■□□□□ 0.86
SCAMP3-209ENST00000497470 ADHFE1Q8IWW8 467 aa20.43■□□□□ 0.86
SCAMP3-209ENST00000497470 RCOR2Q8IZ40 523 aa20.43■□□□□ 0.86
SCAMP3-209ENST00000497470 CCDC185Q8N715 623 aa20.43■□□□□ 0.86
SCAMP3-209ENST00000497470 PEBP4Q96S96 227 aa20.43■□□□□ 0.86
SCAMP3-209ENST00000497470 FAM83CQ9BQN1 747 aa20.43■□□□□ 0.86
SCAMP3-209ENST00000497470 MARK1Q9P0L2 795 aa20.43■□□□□ 0.86
SCAMP3-209ENST00000497470 OR12D3Q9UGF7 316 aa20.43■□□□□ 0.86
SCAMP3-209ENST00000497470 KIF26AQ9ULI4 1882 aaPredicted RBP20.42■□□□□ 0.86
SCAMP3-209ENST00000497470 TMEM110-MUSTN1A8MSY1 372 aa20.42■□□□□ 0.86
SCAMP3-209ENST00000497470 C2CD4DB7Z1M9 353 aa20.42■□□□□ 0.86
SCAMP3-209ENST00000497470 I6L893 689 aaPredicted RBP20.42■□□□□ 0.86
SCAMP3-209ENST00000497470 CES2O00748 559 aa20.42■□□□□ 0.86
SCAMP3-209ENST00000497470 ZRANB2O95218 330 aaKnown RBP eCLIP20.42■□□□□ 0.86
SCAMP3-209ENST00000497470 PTPN7P35236 360 aa20.42■□□□□ 0.86
SCAMP3-209ENST00000497470 CETN2P41208 172 aa20.42■□□□□ 0.86
SCAMP3-209ENST00000497470 TAZQ16635 292 aa20.42■□□□□ 0.86
SCAMP3-209ENST00000497470 FAM133BQ5BKY9 247 aaKnown RBP20.42■□□□□ 0.86
SCAMP3-209ENST00000497470 ZNF569Q5MCW4 686 aa20.42■□□□□ 0.86
SCAMP3-209ENST00000497470 LRRC31Q6UY01 552 aa20.42■□□□□ 0.86
SCAMP3-209ENST00000497470 DENND1CQ8IV53 801 aa20.42■□□□□ 0.86
SCAMP3-209ENST00000497470 ZNF683Q8IZ20 524 aa20.42■□□□□ 0.86
SCAMP3-209ENST00000497470 ADGRG2Q8IZP9 1017 aa20.42■□□□□ 0.86
SCAMP3-209ENST00000497470 RBM41Q96IZ5 413 aaKnown RBP20.42■□□□□ 0.86
SCAMP3-209ENST00000497470 EPAS1Q99814 870 aa20.42■□□□□ 0.86
SCAMP3-209ENST00000497470 ZNF670Q9BS34 389 aa20.42■□□□□ 0.86
SCAMP3-209ENST00000497470 CARD9Q9H257 536 aa20.42■□□□□ 0.86
SCAMP3-209ENST00000497470 ANLNQ9NQW6 1124 aa20.42■□□□□ 0.86
SCAMP3-209ENST00000497470 PCSK1NQ9UHG2 260 aa20.42■□□□□ 0.86
SCAMP3-209ENST00000497470 HS3ST4Q9Y661 456 aa20.42■□□□□ 0.86
SCAMP3-209ENST00000497470 SZT2Q5T011 3432 aa20.41■□□□□ 0.86
SCAMP3-209ENST00000497470 SYNJ2BP-COX16A0A087WUM0 186 aa20.41■□□□□ 0.86
SCAMP3-209ENST00000497470 C19orf67A6NJJ6 358 aa20.41■□□□□ 0.86
SCAMP3-209ENST00000497470 WASH4PA8MWX3 477 aa20.41■□□□□ 0.86
SCAMP3-209ENST00000497470 RPS6KA1Q15418 735 aa20.41■□□□□ 0.86
SCAMP3-209ENST00000497470 MPPE1Q53F39 396 aa20.41■□□□□ 0.86
SCAMP3-209ENST00000497470 RAB6CQ53S08 254 aa20.41■□□□□ 0.86
SCAMP3-209ENST00000497470 PIK3R6Q5UE93 754 aa20.41■□□□□ 0.86
SCAMP3-209ENST00000497470 VITQ6UXI7 678 aa20.41■□□□□ 0.86
SCAMP3-209ENST00000497470 TSC1Q92574 1164 aa20.41■□□□□ 0.86
SCAMP3-209ENST00000497470 ATP2A3Q93084 1043 aa20.41■□□□□ 0.86
SCAMP3-209ENST00000497470 FAF2Q96CS3 445 aa20.41■□□□□ 0.86
SCAMP3-209ENST00000497470 RSPRY1Q96DX4 576 aa20.41■□□□□ 0.86
SCAMP3-209ENST00000497470 LRRC3BQ96PB8 259 aa20.41■□□□□ 0.86
SCAMP3-209ENST00000497470 RAB6CQ9H0N0 254 aa20.41■□□□□ 0.86
SCAMP3-209ENST00000497470 ZWILCHQ9H900 591 aa20.41■□□□□ 0.86
SCAMP3-209ENST00000497470 COX16Q9P0S2 106 aa20.41■□□□□ 0.86
SCAMP3-209ENST00000497470 F5H5T6 163 aa20.4■□□□□ 0.86
SCAMP3-209ENST00000497470 FGF10O15520 208 aaPredicted RBP20.4■□□□□ 0.86
SCAMP3-209ENST00000497470 DDX3YO15523 660 aaKnown RBP20.4■□□□□ 0.86
SCAMP3-209ENST00000497470 HMBSP08397 361 aa20.4■□□□□ 0.86
SCAMP3-209ENST00000497470 TACR2P21452 398 aa20.4■□□□□ 0.86
SCAMP3-209ENST00000497470 KDELR1P24390 212 aa20.4■□□□□ 0.86
SCAMP3-209ENST00000497470 ARL4AP40617 200 aa20.4■□□□□ 0.86
SCAMP3-209ENST00000497470 VIPR2P41587 438 aa20.4■□□□□ 0.86
SCAMP3-209ENST00000497470 GNG11P61952 73 aa20.4■□□□□ 0.86
SCAMP3-209ENST00000497470 AUHQ13825 339 aaKnown RBP20.4■□□□□ 0.86
SCAMP3-209ENST00000497470 PPP2R5EQ16537 467 aa20.4■□□□□ 0.86
SCAMP3-209ENST00000497470 RABGAP1LQ5R372 815 aa20.4■□□□□ 0.86
SCAMP3-209ENST00000497470 NADSYN1Q6IA69 706 aa20.4■□□□□ 0.86
SCAMP3-209ENST00000497470 PARM1Q6UWI2 310 aa20.4■□□□□ 0.86
SCAMP3-209ENST00000497470 FGF14Q92915 247 aa20.4■□□□□ 0.86
SCAMP3-209ENST00000497470 TRMT61BQ9BVS5 477 aaKnown RBP20.4■□□□□ 0.86
SCAMP3-209ENST00000497470 TLR10Q9BXR5 811 aa20.4■□□□□ 0.86
SCAMP3-209ENST00000497470 SLC2A11Q9BYW1 496 aa20.4■□□□□ 0.86
SCAMP3-209ENST00000497470 SMG9Q9H0W8 520 aaKnown RBP20.4■□□□□ 0.86
SCAMP3-209ENST00000497470 TYW5A2RUC4 315 aaKnown RBP20.39■□□□□ 0.85
SCAMP3-209ENST00000497470 H3BRJ5 948 aa20.39■□□□□ 0.85
SCAMP3-209ENST00000497470 ZNF500O60304 480 aaPredicted RBP20.39■□□□□ 0.85
SCAMP3-209ENST00000497470 NFATC1O95644 943 aa20.39■□□□□ 0.85
SCAMP3-209ENST00000497470 FTCDO95954 541 aa20.39■□□□□ 0.85
SCAMP3-209ENST00000497470 CYBBP04839 570 aa20.39■□□□□ 0.85
SCAMP3-209ENST00000497470 TCF4P15884 667 aa20.39■□□□□ 0.85
SCAMP3-209ENST00000497470 SSR1P43307 286 aaKnown RBP20.39■□□□□ 0.85
SCAMP3-209ENST00000497470 IFNAR2P48551 515 aa20.39■□□□□ 0.85
SCAMP3-209ENST00000497470 OXCT1P55809 520 aa20.39■□□□□ 0.85
SCAMP3-209ENST00000497470 NR1H3Q13133 447 aa20.39■□□□□ 0.85
SCAMP3-209ENST00000497470 EML3Q32P44 896 aa20.39■□□□□ 0.85
SCAMP3-209ENST00000497470 ARTNQ5T4W7 220 aa20.39■□□□□ 0.85
SCAMP3-209ENST00000497470 PAPD7Q5XG87 772 aaKnown RBP20.39■□□□□ 0.85
SCAMP3-209ENST00000497470 CHST9Q7L1S5 443 aa20.39■□□□□ 0.85
SCAMP3-209ENST00000497470 BBS7Q8IWZ6 715 aa20.39■□□□□ 0.85
SCAMP3-209ENST00000497470 YAF2Q8IY57 180 aa20.39■□□□□ 0.85
SCAMP3-209ENST00000497470 SLC35F6Q8N357 371 aa20.39■□□□□ 0.85
SCAMP3-209ENST00000497470 KCTD6Q8NC69 237 aa20.39■□□□□ 0.85
SCAMP3-209ENST00000497470 RIN3Q8TB24 985 aa20.39■□□□□ 0.85
SCAMP3-209ENST00000497470 DNASE1L2Q92874 299 aa20.39■□□□□ 0.85
SCAMP3-209ENST00000497470 IRF7Q92985 503 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms