RNA–Protein interactions for RNA: ENST00000495327.1

RBM28-208, Transcript of RNA binding motif protein 28, human

TSL 2

Gene RBM28, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM28-208	ENST00000495327	SPACA7	Q96KW9	195 aa		13.85	□□□□□ -0.19
RBM28-208	ENST00000495327	PRICKLE1	Q96MT3	831 aa	Predicted RBP	13.85	□□□□□ -0.19
RBM28-208	ENST00000495327	BPIFA3	Q9BQP9	254 aa		13.85	□□□□□ -0.19
RBM28-208	ENST00000495327	HSD3B7	Q9H2F3	369 aa		13.85	□□□□□ -0.19
RBM28-208	ENST00000495327	CACNA2D2	Q9NY47	1150 aa		13.85	□□□□□ -0.19
RBM28-208	ENST00000495327	BCCIP	Q9P287	314 aa	Known RBP eCLIP	13.85	□□□□□ -0.19
RBM28-208	ENST00000495327	THAP10	Q9P2Z0	257 aa	Predicted RBP	13.85	□□□□□ -0.19
RBM28-208	ENST00000495327	SIK3	Q9Y2K2	1263 aa		13.85	□□□□□ -0.19
RBM28-208	ENST00000495327	SDK1	Q7Z5N4	2213 aa		13.84	□□□□□ -0.19
RBM28-208	ENST00000495327	TYW5	A2RUC4	315 aa	Known RBP	13.84	□□□□□ -0.19
RBM28-208	ENST00000495327	LRRC10B	A6NIK2	292 aa		13.84	□□□□□ -0.19
RBM28-208	ENST00000495327	DCLK1	O15075	740 aa		13.84	□□□□□ -0.19
RBM28-208	ENST00000495327	DAB1	O75553	588 aa		13.84	□□□□□ -0.19
RBM28-208	ENST00000495327	LSM8	O95777	96 aa	Known RBP	13.84	□□□□□ -0.19
RBM28-208	ENST00000495327	SCNN1A	P37088	669 aa		13.84	□□□□□ -0.19
RBM28-208	ENST00000495327	WAS	P42768	502 aa		13.84	□□□□□ -0.19
RBM28-208	ENST00000495327	GABRB2	P47870	512 aa		13.84	□□□□□ -0.19
RBM28-208	ENST00000495327	KLK7	P49862	253 aa		13.84	□□□□□ -0.19
RBM28-208	ENST00000495327	JAM2	P57087	298 aa		13.84	□□□□□ -0.19
RBM28-208	ENST00000495327	PITX1	P78337	314 aa	Predicted RBP	13.84	□□□□□ -0.19
RBM28-208	ENST00000495327	BYSL	Q13895	437 aa	Known RBP	13.84	□□□□□ -0.19
RBM28-208	ENST00000495327	TAF5	Q15542	800 aa		13.84	□□□□□ -0.19
RBM28-208	ENST00000495327	DCAF6	Q58WW2	860 aa		13.84	□□□□□ -0.19
RBM28-208	ENST00000495327	PLA2G2C	Q5R387	149 aa		13.84	□□□□□ -0.19
RBM28-208	ENST00000495327	TMEM215	Q68D42	235 aa		13.84	□□□□□ -0.19
RBM28-208	ENST00000495327	RFWD3	Q6PCD5	774 aa		13.84	□□□□□ -0.19
RBM28-208	ENST00000495327	PRR23C	Q6ZRP0	262 aa		13.84	□□□□□ -0.19
RBM28-208	ENST00000495327	APTX	Q7Z2E3	356 aa	Known RBP	13.84	□□□□□ -0.19
RBM28-208	ENST00000495327	NOP9	Q86U38	636 aa	Known RBP	13.84	□□□□□ -0.19
RBM28-208	ENST00000495327	DEFB106A	Q8N104	65 aa		13.84	□□□□□ -0.19
RBM28-208	ENST00000495327	AHI1	Q8N157	1196 aa		13.84	□□□□□ -0.19
RBM28-208	ENST00000495327	BTN2A3P	Q96KV6	586 aa		13.84	□□□□□ -0.19
RBM28-208	ENST00000495327	NAT10	Q9H0A0	1025 aa	Known RBP	13.84	□□□□□ -0.19
RBM28-208	ENST00000495327	SYNC	Q9H7C4	482 aa		13.84	□□□□□ -0.19
RBM28-208	ENST00000495327	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	13.84	□□□□□ -0.19
RBM28-208	ENST00000495327	ELOVL2	Q9NXB9	296 aa		13.84	□□□□□ -0.19
RBM28-208	ENST00000495327	STON1	Q9Y6Q2	735 aa		13.84	□□□□□ -0.19
RBM28-208	ENST00000495327	TIMM44	O43615	452 aa		13.83	□□□□□ -0.2
RBM28-208	ENST00000495327	TBL1X	O60907	577 aa		13.83	□□□□□ -0.2
RBM28-208	ENST00000495327	NDUFV2	P19404	249 aa		13.83	□□□□□ -0.2
RBM28-208	ENST00000495327	SDHB	P21912	280 aa		13.83	□□□□□ -0.2
RBM28-208	ENST00000495327	BCKDHB	P21953	392 aa		13.83	□□□□□ -0.2
RBM28-208	ENST00000495327	GBP1	P32455	592 aa		13.83	□□□□□ -0.2
RBM28-208	ENST00000495327	IL12RB1	P42701	662 aa		13.83	□□□□□ -0.2
RBM28-208	ENST00000495327	POLR2F	P61218	127 aa	Known RBP	13.83	□□□□□ -0.2
RBM28-208	ENST00000495327	CDK17	Q00537	523 aa		13.83	□□□□□ -0.2
RBM28-208	ENST00000495327	SLC6A3	Q01959	620 aa		13.83	□□□□□ -0.2
RBM28-208	ENST00000495327	MTA1	Q13330	715 aa		13.83	□□□□□ -0.2
RBM28-208	ENST00000495327	ZNF234	Q14588	700 aa		13.83	□□□□□ -0.2
RBM28-208	ENST00000495327	STARD3	Q14849	445 aa		13.83	□□□□□ -0.2
RBM28-208	ENST00000495327	MAP7D1	Q3KQU3	841 aa		13.83	□□□□□ -0.2
RBM28-208	ENST00000495327	ANO6	Q4KMQ2	910 aa		13.83	□□□□□ -0.2
RBM28-208	ENST00000495327	MS4A13	Q5J8X5	152 aa		13.83	□□□□□ -0.2
RBM28-208	ENST00000495327	SPDYC	Q5MJ68	293 aa		13.83	□□□□□ -0.2
RBM28-208	ENST00000495327	OR6B2	Q6IFH4	312 aa		13.83	□□□□□ -0.2
RBM28-208	ENST00000495327	KIAA1211L	Q6NV74	962 aa		13.83	□□□□□ -0.2
RBM28-208	ENST00000495327	AOPEP	Q8N6M6	819 aa		13.83	□□□□□ -0.2
RBM28-208	ENST00000495327	ATP6V0D2	Q8N8Y2	350 aa		13.83	□□□□□ -0.2
RBM28-208	ENST00000495327	RMDN1	Q96DB5	314 aa		13.83	□□□□□ -0.2
RBM28-208	ENST00000495327	ERGIC2	Q96RQ1	377 aa		13.83	□□□□□ -0.2
RBM28-208	ENST00000495327	CIPC	Q9C0C6	399 aa		13.83	□□□□□ -0.2
RBM28-208	ENST00000495327	NUCKS1	Q9H1E3	243 aa	Known RBP	13.83	□□□□□ -0.2
RBM28-208	ENST00000495327	ARRDC1-AS1	Q9H2J1	176 aa		13.83	□□□□□ -0.2
RBM28-208	ENST00000495327	PDCL3	Q9H2J4	239 aa		13.83	□□□□□ -0.2
RBM28-208	ENST00000495327	FAM204A	Q9H8W3	233 aa		13.83	□□□□□ -0.2
RBM28-208	ENST00000495327	FAM207A	Q9NSI2	230 aa	Predicted RBP	13.83	□□□□□ -0.2
RBM28-208	ENST00000495327	DLL3	Q9NYJ7	618 aa		13.83	□□□□□ -0.2
RBM28-208	ENST00000495327	RRN3	Q9NYV6	651 aa		13.83	□□□□□ -0.2
RBM28-208	ENST00000495327	CALCOCO1	Q9P1Z2	691 aa		13.83	□□□□□ -0.2
RBM28-208	ENST00000495327	GGA2	Q9UJY4	613 aa		13.83	□□□□□ -0.2
RBM28-208	ENST00000495327	DOCK4	Q8N1I0	1966 aa		13.83	□□□□□ -0.2
RBM28-208	ENST00000495327	GOLGA6L7	A0A1B0GV03	622 aa		13.82	□□□□□ -0.2
RBM28-208	ENST00000495327	EPHB6	O15197	1021 aa		13.82	□□□□□ -0.2
RBM28-208	ENST00000495327	ZBTB24	O43167	697 aa	Predicted RBP	13.82	□□□□□ -0.2
RBM28-208	ENST00000495327	ZNF217	O75362	1048 aa		13.82	□□□□□ -0.2
RBM28-208	ENST00000495327	MOCS2	O96007	188 aa	Predicted RBP	13.82	□□□□□ -0.2
RBM28-208	ENST00000495327	ZNF806	P0C7X5	589 aa		13.82	□□□□□ -0.2
RBM28-208	ENST00000495327	SLC2A3	P11169	496 aa		13.82	□□□□□ -0.2
RBM28-208	ENST00000495327	PABPC1	P11940	636 aa	Known RBP	13.82	□□□□□ -0.2
RBM28-208	ENST00000495327	CCR1	P32246	355 aa		13.82	□□□□□ -0.2
RBM28-208	ENST00000495327	NOS2	P35228	1153 aa		13.82	□□□□□ -0.2
RBM28-208	ENST00000495327	SOX5	P35711	763 aa		13.82	□□□□□ -0.2
RBM28-208	ENST00000495327	MPL	P40238	635 aa		13.82	□□□□□ -0.2
RBM28-208	ENST00000495327	NOMO3	P69849	1222 aa		13.82	□□□□□ -0.2
RBM28-208	ENST00000495327	SYCP1	Q15431	976 aa		13.82	□□□□□ -0.2
RBM28-208	ENST00000495327	ZC3H12A	Q5D1E8	599 aa	Known RBP	13.82	□□□□□ -0.2
RBM28-208	ENST00000495327	TAF3	Q5VWG9	929 aa		13.82	□□□□□ -0.2
RBM28-208	ENST00000495327	CAVIN1	Q6NZI2	390 aa	Known RBP	13.82	□□□□□ -0.2
RBM28-208	ENST00000495327	CHST9	Q7L1S5	443 aa		13.82	□□□□□ -0.2
RBM28-208	ENST00000495327	MFN1	Q8IWA4	741 aa		13.82	□□□□□ -0.2
RBM28-208	ENST00000495327	PGBD3	Q8N328	593 aa		13.82	□□□□□ -0.2
RBM28-208	ENST00000495327	MSANTD4	Q8NCY6	345 aa		13.82	□□□□□ -0.2
RBM28-208	ENST00000495327	NEK11	Q8NG66	645 aa		13.82	□□□□□ -0.2
RBM28-208	ENST00000495327	WFDC5	Q8TCV5	224 aa		13.82	□□□□□ -0.2
RBM28-208	ENST00000495327	C18orf8	Q96DM3	657 aa		13.82	□□□□□ -0.2
RBM28-208	ENST00000495327	LMLN	Q96KR4	655 aa		13.82	□□□□□ -0.2
RBM28-208	ENST00000495327	VPS45	Q9NRW7	570 aa		13.82	□□□□□ -0.2
RBM28-208	ENST00000495327	ABCB8	Q9NUT2	735 aa		13.82	□□□□□ -0.2
RBM28-208	ENST00000495327	DDIT4	Q9NX09	232 aa		13.82	□□□□□ -0.2
RBM28-208	ENST00000495327	XPO7	Q9UIA9	1087 aa	Known RBP	13.82	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms