RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 TCRBV5S1A1TA0A578 114 aa14.48□□□□□ -0.09
CCM2-217ENST00000492883 ATMINO43313 823 aaPredicted RBP14.48□□□□□ -0.09
CCM2-217ENST00000492883 TBL1XO60907 577 aa14.48□□□□□ -0.09
CCM2-217ENST00000492883 PENKP01210 267 aaPredicted RBP14.48□□□□□ -0.09
CCM2-217ENST00000492883 TACR2P21452 398 aa14.48□□□□□ -0.09
CCM2-217ENST00000492883 PTPN9P43378 593 aa14.48□□□□□ -0.09
CCM2-217ENST00000492883 DGKGP49619 791 aa14.48□□□□□ -0.09
CCM2-217ENST00000492883 NUBP1P53384 320 aa14.48□□□□□ -0.09
CCM2-217ENST00000492883 ATXN1P54253 815 aaKnown RBP14.48□□□□□ -0.09
CCM2-217ENST00000492883 RPL7AP62424 266 aaKnown RBP14.48□□□□□ -0.09
CCM2-217ENST00000492883 GFPT1Q06210 699 aaPredicted RBP14.48□□□□□ -0.09
CCM2-217ENST00000492883 MAPK8IP2Q13387 824 aaPredicted RBP14.48□□□□□ -0.09
CCM2-217ENST00000492883 C15orf59Q2T9L4 293 aaPredicted RBP14.48□□□□□ -0.09
CCM2-217ENST00000492883 MS4A13Q5J8X5 152 aa14.48□□□□□ -0.09
CCM2-217ENST00000492883 BRMS1LQ5PSV4 323 aa14.48□□□□□ -0.09
CCM2-217ENST00000492883 OTUD1Q5VV17 481 aaPredicted RBP14.48□□□□□ -0.09
CCM2-217ENST00000492883 RAP1GAP2Q684P5 730 aa14.48□□□□□ -0.09
CCM2-217ENST00000492883 PLEKHA7Q6IQ23 1121 aa14.48□□□□□ -0.09
CCM2-217ENST00000492883 LGI2Q8N0V4 545 aa14.48□□□□□ -0.09
CCM2-217ENST00000492883 CCDC26Q8TAB7 109 aa14.48□□□□□ -0.09
CCM2-217ENST00000492883 CCDC42Q96M95 316 aa14.48□□□□□ -0.09
CCM2-217ENST00000492883 CHP1Q99653 195 aa14.48□□□□□ -0.09
CCM2-217ENST00000492883 ADAM33Q9BZ11 813 aa14.48□□□□□ -0.09
CCM2-217ENST00000492883 IRX2Q9BZI1 471 aaPredicted RBP14.48□□□□□ -0.09
CCM2-217ENST00000492883 SIK2Q9H0K1 926 aa14.48□□□□□ -0.09
CCM2-217ENST00000492883 CHRDQ9H2X0 955 aa14.48□□□□□ -0.09
CCM2-217ENST00000492883 NHEJ1Q9H9Q4 299 aaPredicted RBP14.48□□□□□ -0.09
CCM2-217ENST00000492883 STIM2Q9P246 746 aa14.48□□□□□ -0.09
CCM2-217ENST00000492883 DENND4CQ5VZ89 1909 aa14.48□□□□□ -0.09
CCM2-217ENST00000492883 COL4A3Q01955 1670 aa14.48□□□□□ -0.09
CCM2-217ENST00000492883 MYO16Q9Y6X6 1858 aa14.48□□□□□ -0.09
CCM2-217ENST00000492883 F5H5T6 163 aa14.47□□□□□ -0.09
CCM2-217ENST00000492883 TRIM24O15164 1050 aa14.47□□□□□ -0.09
CCM2-217ENST00000492883 RNF40O75150 1001 aa14.47□□□□□ -0.09
CCM2-217ENST00000492883 PAGE1O75459 146 aa14.47□□□□□ -0.09
CCM2-217ENST00000492883 ENDOD1O94919 500 aa14.47□□□□□ -0.09
CCM2-217ENST00000492883 ADCY5O95622 1261 aa14.47□□□□□ -0.09
CCM2-217ENST00000492883 ZNF143P52747 638 aaPredicted RBP14.47□□□□□ -0.09
CCM2-217ENST00000492883 SEC13P55735 322 aa14.47□□□□□ -0.09
CCM2-217ENST00000492883 MTAPQ13126 283 aa14.47□□□□□ -0.09
CCM2-217ENST00000492883 ARL13BQ3SXY8 428 aa14.47□□□□□ -0.09
CCM2-217ENST00000492883 PPP1R15BQ5SWA1 713 aa14.47□□□□□ -0.09
CCM2-217ENST00000492883 SH3PXD2AQ5TCZ1 1133 aa14.47□□□□□ -0.09
CCM2-217ENST00000492883 Q6ZS52 159 aa14.47□□□□□ -0.09
CCM2-217ENST00000492883 STRADAQ7RTN6 431 aa14.47□□□□□ -0.09
CCM2-217ENST00000492883 FAM131BQ86XD5 332 aa14.47□□□□□ -0.09
CCM2-217ENST00000492883 C1orf210Q8IVY1 113 aa14.47□□□□□ -0.09
CCM2-217ENST00000492883 CCDC117Q8IWD4 279 aaPredicted RBP14.47□□□□□ -0.09
CCM2-217ENST00000492883 CFAP52Q8N1V2 620 aa14.47□□□□□ -0.09
CCM2-217ENST00000492883 TC2NQ8N9U0 490 aa14.47□□□□□ -0.09
CCM2-217ENST00000492883 HJURPQ8NCD3 748 aaPredicted RBP14.47□□□□□ -0.09
CCM2-217ENST00000492883 FAM172AQ8WUF8 416 aa14.47□□□□□ -0.09
CCM2-217ENST00000492883 P2RY11Q96G91 374 aa14.47□□□□□ -0.09
CCM2-217ENST00000492883 PRRX2Q99811 253 aa14.47□□□□□ -0.09
CCM2-217ENST00000492883 IER2Q9BTL4 223 aa14.47□□□□□ -0.09
CCM2-217ENST00000492883 MRPL47Q9HD33 250 aaKnown RBP14.47□□□□□ -0.09
CCM2-217ENST00000492883 ARHGEF38Q9NXL2 777 aa14.47□□□□□ -0.09
CCM2-217ENST00000492883 HCN4Q9Y3Q4 1203 aa14.47□□□□□ -0.09
CCM2-217ENST00000492883 SCINQ9Y6U3 715 aa14.47□□□□□ -0.09
CCM2-217ENST00000492883 TECTAO75443 2155 aa14.47□□□□□ -0.09
CCM2-217ENST00000492883 A0A0A0MRY4 1105 aa14.46□□□□□ -0.09
CCM2-217ENST00000492883 K7EQS6 105 aa14.46□□□□□ -0.09
CCM2-217ENST00000492883 GFRA2O00451 464 aa14.46□□□□□ -0.09
CCM2-217ENST00000492883 LAMTOR5O43504 91 aa14.46□□□□□ -0.09
CCM2-217ENST00000492883 GALR2O43603 387 aaPredicted RBP14.46□□□□□ -0.09
CCM2-217ENST00000492883 ATG13O75143 517 aa14.46□□□□□ -0.09
CCM2-217ENST00000492883 CISD3P0C7P0 127 aa14.46□□□□□ -0.09
CCM2-217ENST00000492883 HOXD9P28356 352 aaPredicted RBP14.46□□□□□ -0.09
CCM2-217ENST00000492883 TNFRSF4P43489 277 aa14.46□□□□□ -0.09
CCM2-217ENST00000492883 SGSHP51688 502 aa14.46□□□□□ -0.09
CCM2-217ENST00000492883 RPS24P62847 133 aaKnown RBP14.46□□□□□ -0.09
CCM2-217ENST00000492883 MESP2Q0VG99 397 aa14.46□□□□□ -0.09
CCM2-217ENST00000492883 AUHQ13825 339 aaKnown RBP14.46□□□□□ -0.09
CCM2-217ENST00000492883 SLC18A3Q16572 532 aa14.46□□□□□ -0.09
CCM2-217ENST00000492883 C10orf76Q5T2E6 689 aa14.46□□□□□ -0.09
CCM2-217ENST00000492883 MPP7Q5T2T1 576 aa14.46□□□□□ -0.09
CCM2-217ENST00000492883 SCYL2Q6P3W7 929 aa14.46□□□□□ -0.09
CCM2-217ENST00000492883 PHTF2Q8N3S3 785 aa14.46□□□□□ -0.09
CCM2-217ENST00000492883 TERB1Q8NA31 727 aa14.46□□□□□ -0.09
CCM2-217ENST00000492883 CENPIQ92674 756 aaPredicted RBP14.46□□□□□ -0.09
CCM2-217ENST00000492883 EZH1Q92800 747 aaPredicted RBP14.46□□□□□ -0.09
CCM2-217ENST00000492883 CNPY3Q9BT09 278 aa14.46□□□□□ -0.09
CCM2-217ENST00000492883 SLC2A11Q9BYW1 496 aa14.46□□□□□ -0.09
CCM2-217ENST00000492883 THAP2Q9H0W7 228 aa14.46□□□□□ -0.09
CCM2-217ENST00000492883 FBXO10Q9UK96 956 aa14.46□□□□□ -0.09
CCM2-217ENST00000492883 CLEC4EQ9ULY5 219 aa14.46□□□□□ -0.09
CCM2-217ENST00000492883 HS3ST4Q9Y661 456 aa14.46□□□□□ -0.09
CCM2-217ENST00000492883 TMEM191CA6NGB0 347 aa14.45□□□□□ -0.1
CCM2-217ENST00000492883 CCP110O43303 1012 aa14.45□□□□□ -0.1
CCM2-217ENST00000492883 PSMA2P25787 234 aa14.45□□□□□ -0.1
CCM2-217ENST00000492883 TIE1P35590 1138 aa14.45□□□□□ -0.1
CCM2-217ENST00000492883 CXCL12P48061 93 aa14.45□□□□□ -0.1
CCM2-217ENST00000492883 GALCP54803 685 aa14.45□□□□□ -0.1
CCM2-217ENST00000492883 GAS6Q14393 721 aa14.45□□□□□ -0.1
CCM2-217ENST00000492883 ASTE1Q2TB18 679 aaPredicted RBP14.45□□□□□ -0.1
CCM2-217ENST00000492883 RAB6CQ53S08 254 aa14.45□□□□□ -0.1
CCM2-217ENST00000492883 C2orf27AQ580R0 203 aa14.45□□□□□ -0.1
CCM2-217ENST00000492883 RABGAP1LQ5R372 815 aa14.45□□□□□ -0.1
CCM2-217ENST00000492883 ACBD5Q5T8D3 534 aaPredicted RBP14.45□□□□□ -0.1
CCM2-217ENST00000492883 EMC10Q5UCC4 262 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms