RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 NPC1O15118 1278 aa12.27□□□□□ -0.45
ACTN4-206ENST00000489451 TSPAN3O60637 253 aa12.27□□□□□ -0.45
ACTN4-206ENST00000489451 CBFA2T3O75081 653 aa12.27□□□□□ -0.45
ACTN4-206ENST00000489451 NDUFS2O75306 463 aa12.27□□□□□ -0.45
ACTN4-206ENST00000489451 IGLV3-27P01718 113 aa12.27□□□□□ -0.45
ACTN4-206ENST00000489451 CD44P16070 742 aaKnown RBP12.27□□□□□ -0.45
ACTN4-206ENST00000489451 ZNF132P52740 706 aa12.27□□□□□ -0.45
ACTN4-206ENST00000489451 DAOAP59103 153 aa12.27□□□□□ -0.45
ACTN4-206ENST00000489451 BST2Q10589 180 aaKnown RBP12.27□□□□□ -0.45
ACTN4-206ENST00000489451 LRMPQ12912 555 aa12.27□□□□□ -0.45
ACTN4-206ENST00000489451 CAMK2GQ13555 558 aaPredicted RBP12.27□□□□□ -0.45
ACTN4-206ENST00000489451 STARD3Q14849 445 aa12.27□□□□□ -0.45
ACTN4-206ENST00000489451 EIF4HQ15056 248 aaKnown RBP12.27□□□□□ -0.45
ACTN4-206ENST00000489451 SGO2Q562F6 1265 aa12.27□□□□□ -0.45
ACTN4-206ENST00000489451 DCAF12L1Q5VU92 463 aa12.27□□□□□ -0.45
ACTN4-206ENST00000489451 BSPRYQ5W0U4 402 aa12.27□□□□□ -0.45
ACTN4-206ENST00000489451 RSRC2Q7L4I2 434 aaKnown RBP12.27□□□□□ -0.45
ACTN4-206ENST00000489451 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.27□□□□□ -0.45
ACTN4-206ENST00000489451 LMO3Q8TAP4 145 aa12.27□□□□□ -0.45
ACTN4-206ENST00000489451 CLEC4CQ8WTT0 213 aa12.27□□□□□ -0.45
ACTN4-206ENST00000489451 DDI1Q8WTU0 396 aa12.27□□□□□ -0.45
ACTN4-206ENST00000489451 KCTD13Q8WZ19 329 aa12.27□□□□□ -0.45
ACTN4-206ENST00000489451 FOXJ1Q92949 421 aa12.27□□□□□ -0.45
ACTN4-206ENST00000489451 SIPA1Q96FS4 1042 aa12.27□□□□□ -0.45
ACTN4-206ENST00000489451 MYO19Q96H55 970 aa12.27□□□□□ -0.45
ACTN4-206ENST00000489451 LMLNQ96KR4 655 aa12.27□□□□□ -0.45
ACTN4-206ENST00000489451 SLC2A11Q9BYW1 496 aa12.27□□□□□ -0.45
ACTN4-206ENST00000489451 CIPCQ9C0C6 399 aa12.27□□□□□ -0.45
ACTN4-206ENST00000489451 STRIP2Q9ULQ0 834 aa12.27□□□□□ -0.45
ACTN4-206ENST00000489451 HBS1LQ9Y450 684 aaKnown RBP12.27□□□□□ -0.45
ACTN4-206ENST00000489451 NFE2L3Q9Y4A8 694 aa12.27□□□□□ -0.45
ACTN4-206ENST00000489451 PLXNA2O75051 1894 aa12.27□□□□□ -0.45
ACTN4-206ENST00000489451 A0A1B0GTW7 788 aa12.26□□□□□ -0.45
ACTN4-206ENST00000489451 GOLGA6L7A0A1B0GV03 622 aa12.26□□□□□ -0.45
ACTN4-206ENST00000489451 PIK3R2O00459 728 aa12.26□□□□□ -0.45
ACTN4-206ENST00000489451 FYNP06241 537 aa12.26□□□□□ -0.45
ACTN4-206ENST00000489451 EPHX1P07099 455 aa12.26□□□□□ -0.45
ACTN4-206ENST00000489451 SYPP08247 313 aa12.26□□□□□ -0.45
ACTN4-206ENST00000489451 SLC6A4P31645 630 aa12.26□□□□□ -0.45
ACTN4-206ENST00000489451 ACSL1P33121 698 aa12.26□□□□□ -0.45
ACTN4-206ENST00000489451 RGS7P49802 495 aa12.26□□□□□ -0.45
ACTN4-206ENST00000489451 FKBP3Q00688 224 aaKnown RBP12.26□□□□□ -0.45
ACTN4-206ENST00000489451 MPPE1Q53F39 396 aa12.26□□□□□ -0.45
ACTN4-206ENST00000489451 FAM133BQ5BKY9 247 aaKnown RBP12.26□□□□□ -0.45
ACTN4-206ENST00000489451 TCERG1LQ5VWI1 586 aa12.26□□□□□ -0.45
ACTN4-206ENST00000489451 NADSYN1Q6IA69 706 aa12.26□□□□□ -0.45
ACTN4-206ENST00000489451 PMF1Q6P1K2 205 aa12.26□□□□□ -0.45
ACTN4-206ENST00000489451 MSANTD2Q6P1R3 559 aa12.26□□□□□ -0.45
ACTN4-206ENST00000489451 NAXDQ8IW45 347 aa12.26□□□□□ -0.45
ACTN4-206ENST00000489451 SCML4Q8N228 414 aa12.26□□□□□ -0.45
ACTN4-206ENST00000489451 CADM4Q8NFZ8 388 aa12.26□□□□□ -0.45
ACTN4-206ENST00000489451 OR2T3Q8NH03 318 aa12.26□□□□□ -0.45
ACTN4-206ENST00000489451 BAHD1Q8TBE0 780 aaPredicted RBP12.26□□□□□ -0.45
ACTN4-206ENST00000489451 SLC35F5Q8WV83 523 aa12.26□□□□□ -0.45
ACTN4-206ENST00000489451 PRCCQ92733 491 aaPredicted RBP12.26□□□□□ -0.45
ACTN4-206ENST00000489451 PRICKLE1Q96MT3 831 aaPredicted RBP12.26□□□□□ -0.45
ACTN4-206ENST00000489451 ORAI3Q9BRQ5 295 aa12.26□□□□□ -0.45
ACTN4-206ENST00000489451 LRRC4Q9HBW1 653 aa12.26□□□□□ -0.45
ACTN4-206ENST00000489451 ABCB8Q9NUT2 735 aa12.26□□□□□ -0.45
ACTN4-206ENST00000489451 SUSD2Q9UGT4 822 aa12.26□□□□□ -0.45
ACTN4-206ENST00000489451 FNDC3AQ9Y2H6 1198 aaKnown RBP12.26□□□□□ -0.45
ACTN4-206ENST00000489451 CELSR3Q9NYQ7 3312 aa12.26□□□□□ -0.45
ACTN4-206ENST00000489451 MEI4A8MW99 385 aa12.25□□□□□ -0.45
ACTN4-206ENST00000489451 ZBTB24O43167 697 aaPredicted RBP12.25□□□□□ -0.45
ACTN4-206ENST00000489451 STX10O60499 249 aa12.25□□□□□ -0.45
ACTN4-206ENST00000489451 SYNCRIPO60506 623 aaKnown RBP12.25□□□□□ -0.45
ACTN4-206ENST00000489451 CYBBP04839 570 aa12.25□□□□□ -0.45
ACTN4-206ENST00000489451 SETSIPP0DME0 302 aa12.25□□□□□ -0.45
ACTN4-206ENST00000489451 VDRP11473 427 aa12.25□□□□□ -0.45
ACTN4-206ENST00000489451 LCP1P13796 627 aa12.25□□□□□ -0.45
ACTN4-206ENST00000489451 CD19P15391 556 aa12.25□□□□□ -0.45
ACTN4-206ENST00000489451 BMP6P22004 513 aa12.25□□□□□ -0.45
ACTN4-206ENST00000489451 CD70P32970 193 aa12.25□□□□□ -0.45
ACTN4-206ENST00000489451 FMO5P49326 533 aa12.25□□□□□ -0.45
ACTN4-206ENST00000489451 SLC14A1Q13336 389 aa12.25□□□□□ -0.45
ACTN4-206ENST00000489451 WDR45BQ5MNZ6 344 aa12.25□□□□□ -0.45
ACTN4-206ENST00000489451 SYCP2LQ5T4T6 812 aa12.25□□□□□ -0.45
ACTN4-206ENST00000489451 RFWD3Q6PCD5 774 aa12.25□□□□□ -0.45
ACTN4-206ENST00000489451 LCLAT1Q6UWP7 414 aa12.25□□□□□ -0.45
ACTN4-206ENST00000489451 LAYNQ6UX15 382 aa12.25□□□□□ -0.45
ACTN4-206ENST00000489451 SERPINA13PQ6UXR4 307 aa12.25□□□□□ -0.45
ACTN4-206ENST00000489451 CHST9Q7L1S5 443 aa12.25□□□□□ -0.45
ACTN4-206ENST00000489451 SLCO6A1Q86UG4 719 aa12.25□□□□□ -0.45
ACTN4-206ENST00000489451 FAM124AQ86V42 546 aa12.25□□□□□ -0.45
ACTN4-206ENST00000489451 PNPLA1Q8N8W4 532 aa12.25□□□□□ -0.45
ACTN4-206ENST00000489451 UCMAQ8WVF2 138 aa12.25□□□□□ -0.45
ACTN4-206ENST00000489451 GSDMAQ96QA5 445 aa12.25□□□□□ -0.45
ACTN4-206ENST00000489451 MIR1-1HGQ9H1L0 117 aa12.25□□□□□ -0.45
ACTN4-206ENST00000489451 MTG2Q9H4K7 406 aa12.25□□□□□ -0.45
ACTN4-206ENST00000489451 C6orf106Q9H6K1 298 aaPredicted RBP12.25□□□□□ -0.45
ACTN4-206ENST00000489451 PRSS16Q9NQE7 514 aa12.25□□□□□ -0.45
ACTN4-206ENST00000489451 CNGB3Q9NQW8 809 aa12.25□□□□□ -0.45
ACTN4-206ENST00000489451 OLA1Q9NTK5 396 aaKnown RBP12.25□□□□□ -0.45
ACTN4-206ENST00000489451 TOR4AQ9NXH8 423 aa12.25□□□□□ -0.45
ACTN4-206ENST00000489451 EIF2B4Q9UI10 523 aaKnown RBP12.25□□□□□ -0.45
ACTN4-206ENST00000489451 GGA2Q9UJY4 613 aa12.25□□□□□ -0.45
ACTN4-206ENST00000489451 PCOLCE2Q9UKZ9 415 aa12.25□□□□□ -0.45
ACTN4-206ENST00000489451 INTS6Q9UL03 887 aaKnown RBP12.25□□□□□ -0.45
ACTN4-206ENST00000489451 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.25□□□□□ -0.458e-6■■■□□ 15.8
ACTN4-206ENST00000489451 BCAT2O15382 392 aaPredicted RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms