RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 NELL2Q99435 816 aa16.31■□□□□ 0.2
C9orf3-219ENST00000488186 EIF3CQ99613 913 aaKnown RBP16.31■□□□□ 0.2
C9orf3-219ENST00000488186 NCAPGQ9BPX3 1015 aa16.31■□□□□ 0.2
C9orf3-219ENST00000488186 PACSIN1Q9BY11 444 aa16.31■□□□□ 0.2
C9orf3-219ENST00000488186 UVRAGQ9P2Y5 699 aa16.31■□□□□ 0.2
C9orf3-219ENST00000488186 ANAPC7Q9UJX3 599 aa16.31■□□□□ 0.2
C9orf3-219ENST00000488186 INTUQ9ULD6 942 aa16.31■□□□□ 0.2
C9orf3-219ENST00000488186 NENFQ9UMX5 172 aa16.31■□□□□ 0.2
C9orf3-219ENST00000488186 NDRG2Q9UN36 371 aaKnown RBP16.31■□□□□ 0.2
C9orf3-219ENST00000488186 ARIH1Q9Y4X5 557 aaPredicted RBP16.31■□□□□ 0.2
C9orf3-219ENST00000488186 KANSL1LA0AUZ9 987 aa16.3■□□□□ 0.2
C9orf3-219ENST00000488186 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.3■□□□□ 0.2
C9orf3-219ENST00000488186 NCAM2O15394 837 aa16.3■□□□□ 0.2
C9orf3-219ENST00000488186 ENDOD1O94919 500 aa16.3■□□□□ 0.2
C9orf3-219ENST00000488186 NDUFA10O95299 355 aa16.3■□□□□ 0.2
C9orf3-219ENST00000488186 PTMAP06454 111 aaKnown RBP16.3■□□□□ 0.2
C9orf3-219ENST00000488186 TACR2P21452 398 aa16.3■□□□□ 0.2
C9orf3-219ENST00000488186 CD72P21854 359 aa16.3■□□□□ 0.2
C9orf3-219ENST00000488186 ATXN1P54253 815 aaKnown RBP16.3■□□□□ 0.2
C9orf3-219ENST00000488186 GRSF1Q12849 480 aaKnown RBP eCLIP16.3■□□□□ 0.2
C9orf3-219ENST00000488186 EIF4EBP2Q13542 120 aaPredicted RBP16.3■□□□□ 0.2
C9orf3-219ENST00000488186 PON2Q15165 354 aa16.3■□□□□ 0.2
C9orf3-219ENST00000488186 ACBD5Q5T8D3 534 aaPredicted RBP16.3■□□□□ 0.2
C9orf3-219ENST00000488186 RFWD3Q6PCD5 774 aa16.3■□□□□ 0.2
C9orf3-219ENST00000488186 LRRC31Q6UY01 552 aa16.3■□□□□ 0.2
C9orf3-219ENST00000488186 LGI2Q8N0V4 545 aa16.3■□□□□ 0.2
C9orf3-219ENST00000488186 TXLNBQ8N3L3 684 aa16.3■□□□□ 0.2
C9orf3-219ENST00000488186 ZNF564Q8TBZ8 553 aaPredicted RBP16.3■□□□□ 0.2
C9orf3-219ENST00000488186 FNIP1Q8TF40 1166 aa16.3■□□□□ 0.2
C9orf3-219ENST00000488186 CENPIQ92674 756 aaPredicted RBP16.3■□□□□ 0.2
C9orf3-219ENST00000488186 CD101Q93033 1021 aa16.3■□□□□ 0.2
C9orf3-219ENST00000488186 ARHGEF26Q96DR7 871 aa16.3■□□□□ 0.2
C9orf3-219ENST00000488186 P2RY13Q9BPV8 354 aa16.3■□□□□ 0.2
C9orf3-219ENST00000488186 TBC1D17Q9HA65 648 aa16.3■□□□□ 0.2
C9orf3-219ENST00000488186 ARHGEF38Q9NXL2 777 aa16.3■□□□□ 0.2
C9orf3-219ENST00000488186 PLK2Q9NYY3 685 aa16.3■□□□□ 0.2
C9orf3-219ENST00000488186 CALCOCO1Q9P1Z2 691 aa16.3■□□□□ 0.2
C9orf3-219ENST00000488186 DEC1Q9P2X7 70 aa16.3■□□□□ 0.2
C9orf3-219ENST00000488186 IP6K2Q9UHH9 426 aa16.3■□□□□ 0.2
C9orf3-219ENST00000488186 LCMT1Q9UIC8 334 aa16.3■□□□□ 0.2
C9orf3-219ENST00000488186 STOML2Q9UJZ1 356 aa16.3■□□□□ 0.2
C9orf3-219ENST00000488186 PCDHA13Q9Y5I0 950 aa16.3■□□□□ 0.2
C9orf3-219ENST00000488186 TICRRQ7Z2Z1 1910 aa16.29■□□□□ 0.2
C9orf3-219ENST00000488186 FAM170BA6NMN3 283 aa16.29■□□□□ 0.2
C9orf3-219ENST00000488186 HOXC11O43248 304 aaPredicted RBP16.29■□□□□ 0.2
C9orf3-219ENST00000488186 TBL1XO60907 577 aa16.29■□□□□ 0.2
C9orf3-219ENST00000488186 PAGE1O75459 146 aa16.29■□□□□ 0.2
C9orf3-219ENST00000488186 FECHP22830 423 aa16.29■□□□□ 0.2
C9orf3-219ENST00000488186 SSR1P43307 286 aaKnown RBP16.29■□□□□ 0.2
C9orf3-219ENST00000488186 NOP2P46087 812 aaKnown RBP16.29■□□□□ 0.2
C9orf3-219ENST00000488186 GALK1P51570 392 aa16.29■□□□□ 0.2
C9orf3-219ENST00000488186 KRT83P78385 493 aa16.29■□□□□ 0.2
C9orf3-219ENST00000488186 PIGHQ14442 188 aaPredicted RBP16.29■□□□□ 0.2
C9orf3-219ENST00000488186 ACAP1Q15027 740 aa16.29■□□□□ 0.2
C9orf3-219ENST00000488186 RABGAP1LQ5R372 815 aa16.29■□□□□ 0.2
C9orf3-219ENST00000488186 PIK3R6Q5UE93 754 aa16.29■□□□□ 0.2
C9orf3-219ENST00000488186 OTUD1Q5VV17 481 aaPredicted RBP16.29■□□□□ 0.2
C9orf3-219ENST00000488186 RHOT2Q8IXI1 618 aa16.29■□□□□ 0.2
C9orf3-219ENST00000488186 FAM217AQ8IXS0 508 aa16.29■□□□□ 0.2
C9orf3-219ENST00000488186 HJURPQ8NCD3 748 aaPredicted RBP16.29■□□□□ 0.2
C9orf3-219ENST00000488186 CCDC112Q8NEF3 446 aa16.29■□□□□ 0.2
C9orf3-219ENST00000488186 PNKPQ96T60 521 aa16.29■□□□□ 0.2
C9orf3-219ENST00000488186 ADAM33Q9BZ11 813 aa16.29■□□□□ 0.2
C9orf3-219ENST00000488186 IRX2Q9BZI1 471 aaPredicted RBP16.29■□□□□ 0.2
C9orf3-219ENST00000488186 MARK1Q9P0L2 795 aa16.29■□□□□ 0.2
C9orf3-219ENST00000488186 STIM2Q9P246 746 aa16.29■□□□□ 0.2
C9orf3-219ENST00000488186 XPO7Q9UIA9 1087 aaKnown RBP16.29■□□□□ 0.2
C9orf3-219ENST00000488186 PRPSAP2O60256 369 aa16.28■□□□□ 0.2
C9orf3-219ENST00000488186 LCA5LO95447 670 aa16.28■□□□□ 0.2
C9orf3-219ENST00000488186 SLC6A4P31645 630 aa16.28■□□□□ 0.2
C9orf3-219ENST00000488186 ADRA1BP35368 520 aa16.28■□□□□ 0.2
C9orf3-219ENST00000488186 SLC6A11P48066 632 aa16.28■□□□□ 0.2
C9orf3-219ENST00000488186 HDAC4P56524 1084 aa16.28■□□□□ 0.2
C9orf3-219ENST00000488186 OGDHQ02218 1023 aa16.28■□□□□ 0.2
C9orf3-219ENST00000488186 AUHQ13825 339 aaKnown RBP16.28■□□□□ 0.2
C9orf3-219ENST00000488186 FAM133BQ5BKY9 247 aaKnown RBP16.28■□□□□ 0.2
C9orf3-219ENST00000488186 MS4A13Q5J8X5 152 aa16.28■□□□□ 0.2
C9orf3-219ENST00000488186 ASTLQ6HA08 431 aaPredicted RBP16.28■□□□□ 0.2
C9orf3-219ENST00000488186 NADSYN1Q6IA69 706 aa16.28■□□□□ 0.2
C9orf3-219ENST00000488186 GRAMD4Q6IC98 578 aa16.28■□□□□ 0.2
C9orf3-219ENST00000488186 RAD9BQ6WBX8 426 aa16.28■□□□□ 0.2
C9orf3-219ENST00000488186 BNIPLQ7Z465 357 aa16.28■□□□□ 0.2
C9orf3-219ENST00000488186 SLFN11Q7Z7L1 901 aa16.28■□□□□ 0.2
C9orf3-219ENST00000488186 KIAA1328Q86T90 577 aa16.28■□□□□ 0.2
C9orf3-219ENST00000488186 SUGP1Q8IWZ8 645 aaKnown RBP16.28■□□□□ 0.2
C9orf3-219ENST00000488186 SLC35G2Q8TBE7 412 aa16.28■□□□□ 0.2
C9orf3-219ENST00000488186 RPRD1AQ96P16 312 aaPredicted RBP16.28■□□□□ 0.2
C9orf3-219ENST00000488186 HAPLN3Q96S86 360 aa16.28■□□□□ 0.2
C9orf3-219ENST00000488186 PRRX2Q99811 253 aa16.28■□□□□ 0.2
C9orf3-219ENST00000488186 TRIM7Q9C029 511 aa16.28■□□□□ 0.2
C9orf3-219ENST00000488186 DNAJC17Q9NVM6 304 aaKnown RBP16.28■□□□□ 0.2
C9orf3-219ENST00000488186 SIT1Q9Y3P8 196 aa16.28■□□□□ 0.2
C9orf3-219ENST00000488186 HS3ST4Q9Y661 456 aa16.28■□□□□ 0.2
C9orf3-219ENST00000488186 FAM86C2PA6NEL3 165 aa16.27■□□□□ 0.2
C9orf3-219ENST00000488186 SRGAP2O75044 1071 aa16.27■□□□□ 0.2
C9orf3-219ENST00000488186 APODP05090 189 aa16.27■□□□□ 0.2
C9orf3-219ENST00000488186 AOC1P19801 751 aa16.27■□□□□ 0.2
C9orf3-219ENST00000488186 DRD1P21728 446 aa16.27■□□□□ 0.2
C9orf3-219ENST00000488186 EIF2DP41214 584 aaKnown RBP16.27■□□□□ 0.2
C9orf3-219ENST00000488186 MAGEA9P43362 315 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms