RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 CHRNB1P11230 501 aa12.28□□□□□ -0.44
HPS4-214ENST00000485842 TACR2P21452 398 aa12.28□□□□□ -0.44
HPS4-214ENST00000485842 DRD1P21728 446 aa12.28□□□□□ -0.44
HPS4-214ENST00000485842 RDXP35241 583 aaKnown RBP12.28□□□□□ -0.44
HPS4-214ENST00000485842 GGCXP38435 758 aa12.28□□□□□ -0.44
HPS4-214ENST00000485842 EIF2DP41214 584 aaKnown RBP12.28□□□□□ -0.44
HPS4-214ENST00000485842 PTPN9P43378 593 aa12.28□□□□□ -0.44
HPS4-214ENST00000485842 CXCR3P49682 368 aa12.28□□□□□ -0.44
HPS4-214ENST00000485842 SGSHP51688 502 aa12.28□□□□□ -0.44
HPS4-214ENST00000485842 MESP2Q0VG99 397 aa12.28□□□□□ -0.44
HPS4-214ENST00000485842 MAMLD1Q13495 774 aa12.28□□□□□ -0.44
HPS4-214ENST00000485842 EIF4EBP2Q13542 120 aaPredicted RBP12.28□□□□□ -0.44
HPS4-214ENST00000485842 PPP2R5DQ14738 602 aa12.28□□□□□ -0.44
HPS4-214ENST00000485842 CCDC14Q49A88 953 aa12.28□□□□□ -0.44
HPS4-214ENST00000485842 MPPE1Q53F39 396 aa12.28□□□□□ -0.44
HPS4-214ENST00000485842 DGKKQ5KSL6 1271 aa12.28□□□□□ -0.44
HPS4-214ENST00000485842 SH3PXD2AQ5TCZ1 1133 aa12.28□□□□□ -0.44
HPS4-214ENST00000485842 FYB2Q5VWT5 728 aa12.28□□□□□ -0.44
HPS4-214ENST00000485842 PLEKHA7Q6IQ23 1121 aa12.28□□□□□ -0.44
HPS4-214ENST00000485842 ETFBKMTQ8IXQ9 262 aa12.28□□□□□ -0.44
HPS4-214ENST00000485842 LGI2Q8N0V4 545 aa12.28□□□□□ -0.44
HPS4-214ENST00000485842 ZNF687Q8N1G0 1237 aa12.28□□□□□ -0.44
HPS4-214ENST00000485842 HJURPQ8NCD3 748 aaPredicted RBP12.28□□□□□ -0.44
HPS4-214ENST00000485842 FAM172AQ8WUF8 416 aa12.28□□□□□ -0.44
HPS4-214ENST00000485842 AZIN2Q96A70 460 aa12.28□□□□□ -0.44
HPS4-214ENST00000485842 TMA16Q96EY4 203 aaKnown RBP12.28□□□□□ -0.44
HPS4-214ENST00000485842 P2RY11Q96G91 374 aa12.28□□□□□ -0.44
HPS4-214ENST00000485842 CCDC42Q96M95 316 aa12.28□□□□□ -0.44
HPS4-214ENST00000485842 PRICKLE1Q96MT3 831 aaPredicted RBP12.28□□□□□ -0.44
HPS4-214ENST00000485842 TKTL2Q9H0I9 626 aa12.28□□□□□ -0.44
HPS4-214ENST00000485842 WDCPQ9H6R7 721 aa12.28□□□□□ -0.44
HPS4-214ENST00000485842 NHEJ1Q9H9Q4 299 aaPredicted RBP12.28□□□□□ -0.44
HPS4-214ENST00000485842 SPTLC3Q9NUV7 552 aa12.28□□□□□ -0.44
HPS4-214ENST00000485842 DEC1Q9P2X7 70 aa12.28□□□□□ -0.44
HPS4-214ENST00000485842 PAXBP1Q9Y5B6 917 aa12.28□□□□□ -0.44
HPS4-214ENST00000485842 SCINQ9Y6U3 715 aa12.28□□□□□ -0.44
HPS4-214ENST00000485842 TYW5A2RUC4 315 aaKnown RBP12.27□□□□□ -0.45
HPS4-214ENST00000485842 F5H5T6 163 aa12.27□□□□□ -0.45
HPS4-214ENST00000485842 PAGE1O75459 146 aa12.27□□□□□ -0.45
HPS4-214ENST00000485842 KAT7O95251 611 aa12.27□□□□□ -0.45
HPS4-214ENST00000485842 APODP05090 189 aa12.27□□□□□ -0.45
HPS4-214ENST00000485842 MYBL1P10243 752 aa12.27□□□□□ -0.45
HPS4-214ENST00000485842 DESP17661 470 aa12.27□□□□□ -0.45
HPS4-214ENST00000485842 PSMA2P25787 234 aa12.27□□□□□ -0.45
HPS4-214ENST00000485842 CDC25BP30305 580 aa12.27□□□□□ -0.45
HPS4-214ENST00000485842 DGKGP49619 791 aa12.27□□□□□ -0.45
HPS4-214ENST00000485842 SEC13P55735 322 aa12.27□□□□□ -0.45
HPS4-214ENST00000485842 RPS24P62847 133 aaKnown RBP12.27□□□□□ -0.45
HPS4-214ENST00000485842 FZD5Q13467 585 aa12.27□□□□□ -0.45
HPS4-214ENST00000485842 CCINQ13939 588 aa12.27□□□□□ -0.45
HPS4-214ENST00000485842 SLC18A3Q16572 532 aa12.27□□□□□ -0.45
HPS4-214ENST00000485842 MS4A13Q5J8X5 152 aa12.27□□□□□ -0.45
HPS4-214ENST00000485842 BRMS1LQ5PSV4 323 aa12.27□□□□□ -0.45
HPS4-214ENST00000485842 PPP1R15BQ5SWA1 713 aa12.27□□□□□ -0.45
HPS4-214ENST00000485842 PIK3R6Q5UE93 754 aa12.27□□□□□ -0.45
HPS4-214ENST00000485842 Q6ZS52 159 aa12.27□□□□□ -0.45
HPS4-214ENST00000485842 SFTPA1Q8IWL2 248 aa12.27□□□□□ -0.45
HPS4-214ENST00000485842 EZH1Q92800 747 aaPredicted RBP12.27□□□□□ -0.45
HPS4-214ENST00000485842 CLDN23Q96B33 292 aa12.27□□□□□ -0.45
HPS4-214ENST00000485842 MYEOVQ96EZ4 313 aa12.27□□□□□ -0.45
HPS4-214ENST00000485842 PGAP3Q96FM1 320 aaPredicted RBP12.27□□□□□ -0.45
HPS4-214ENST00000485842 SIK2Q9H0K1 926 aa12.27□□□□□ -0.45
HPS4-214ENST00000485842 THAP2Q9H0W7 228 aa12.27□□□□□ -0.45
HPS4-214ENST00000485842 ANLNQ9NQW6 1124 aa12.27□□□□□ -0.45
HPS4-214ENST00000485842 TMPRSS4Q9NRS4 437 aa12.27□□□□□ -0.45
HPS4-214ENST00000485842 DLGAP2Q9P1A6 1054 aa12.27□□□□□ -0.45
HPS4-214ENST00000485842 STIM2Q9P246 746 aa12.27□□□□□ -0.45
HPS4-214ENST00000485842 ATG2BQ96BY7 2078 aa12.26□□□□□ -0.45
HPS4-214ENST00000485842 ZNF318Q5VUA4 2279 aa12.26□□□□□ -0.45
HPS4-214ENST00000485842 TBC1D3BA6NDS4 549 aa12.26□□□□□ -0.45
HPS4-214ENST00000485842 GFRA2O00451 464 aa12.26□□□□□ -0.45
HPS4-214ENST00000485842 RNF40O75150 1001 aa12.26□□□□□ -0.45
HPS4-214ENST00000485842 HOXD9P28356 352 aaPredicted RBP12.26□□□□□ -0.45
HPS4-214ENST00000485842 GRIA2P42262 883 aa12.26□□□□□ -0.45
HPS4-214ENST00000485842 RPS9P46781 194 aaKnown RBP12.26□□□□□ -0.45
HPS4-214ENST00000485842 ZNF143P52747 638 aaPredicted RBP12.26□□□□□ -0.45
HPS4-214ENST00000485842 GALCP54803 685 aa12.26□□□□□ -0.45
HPS4-214ENST00000485842 HDAC4P56524 1084 aa12.26□□□□□ -0.45
HPS4-214ENST00000485842 OGDHQ02218 1023 aa12.26□□□□□ -0.45
HPS4-214ENST00000485842 ASTE1Q2TB18 679 aaPredicted RBP12.26□□□□□ -0.45
HPS4-214ENST00000485842 C10orf76Q5T2E6 689 aa12.26□□□□□ -0.45
HPS4-214ENST00000485842 STRADAQ7RTN6 431 aa12.26□□□□□ -0.45
HPS4-214ENST00000485842 BNIPLQ7Z465 357 aa12.26□□□□□ -0.45
HPS4-214ENST00000485842 CIR1Q86X95 450 aaPredicted RBP12.26□□□□□ -0.45
HPS4-214ENST00000485842 CFAP52Q8N1V2 620 aa12.26□□□□□ -0.45
HPS4-214ENST00000485842 PHTF2Q8N3S3 785 aa12.26□□□□□ -0.45
HPS4-214ENST00000485842 TERB1Q8NA31 727 aa12.26□□□□□ -0.45
HPS4-214ENST00000485842 DTWD2Q8NBA8 298 aa12.26□□□□□ -0.45
HPS4-214ENST00000485842 ARHGEF26Q96DR7 871 aa12.26□□□□□ -0.45
HPS4-214ENST00000485842 CNPY3Q9BT09 278 aa12.26□□□□□ -0.45
HPS4-214ENST00000485842 NUP85Q9BW27 656 aa12.26□□□□□ -0.45
HPS4-214ENST00000485842 PACSIN1Q9BY11 444 aa12.26□□□□□ -0.45
HPS4-214ENST00000485842 TRIM7Q9C029 511 aa12.26□□□□□ -0.45
HPS4-214ENST00000485842 CHRDQ9H2X0 955 aa12.26□□□□□ -0.45
HPS4-214ENST00000485842 MRPL47Q9HD33 250 aaKnown RBP12.26□□□□□ -0.45
HPS4-214ENST00000485842 SPATA6Q9NWH7 488 aaPredicted RBP12.26□□□□□ -0.45
HPS4-214ENST00000485842 ARHGEF38Q9NXL2 777 aa12.26□□□□□ -0.45
HPS4-214ENST00000485842 CLEC4EQ9ULY5 219 aa12.26□□□□□ -0.45
HPS4-214ENST00000485842 NENFQ9UMX5 172 aa12.26□□□□□ -0.45
HPS4-214ENST00000485842 SNX10Q9Y5X0 201 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms