RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 GOLGA6L7A0A1B0GV03 622 aa18.67■□□□□ 0.58
HDAC6-225ENST00000483506 ADAM23O75077 832 aa18.67■□□□□ 0.58
HDAC6-225ENST00000483506 HOXD11P31277 338 aaPredicted RBP18.67■□□□□ 0.58
HDAC6-225ENST00000483506 TIE1P35590 1138 aa18.67■□□□□ 0.58
HDAC6-225ENST00000483506 FLT3P36888 993 aa18.67■□□□□ 0.58
HDAC6-225ENST00000483506 DMWDQ09019 674 aa18.67■□□□□ 0.58
HDAC6-225ENST00000483506 SLC25A52Q3SY17 297 aa18.67■□□□□ 0.58
HDAC6-225ENST00000483506 MS4A13Q5J8X5 152 aa18.67■□□□□ 0.58
HDAC6-225ENST00000483506 EMC10Q5UCC4 262 aa18.67■□□□□ 0.58
HDAC6-225ENST00000483506 E4F1Q66K89 784 aaPredicted RBP18.67■□□□□ 0.58
HDAC6-225ENST00000483506 TRNP1Q6NT89 227 aa18.67■□□□□ 0.58
HDAC6-225ENST00000483506 RFWD3Q6PCD5 774 aa18.67■□□□□ 0.58
HDAC6-225ENST00000483506 MON1BQ7L1V2 547 aa18.67■□□□□ 0.58
HDAC6-225ENST00000483506 TRMT11Q7Z4G4 463 aaKnown RBP18.67■□□□□ 0.58
HDAC6-225ENST00000483506 KIAA0907Q7Z7F0 614 aaPredicted RBP18.67■□□□□ 0.58
HDAC6-225ENST00000483506 ZNF513Q8N8E2 541 aaPredicted RBP18.67■□□□□ 0.58
HDAC6-225ENST00000483506 ATP6V0D2Q8N8Y2 350 aa18.67■□□□□ 0.58
HDAC6-225ENST00000483506 ZNF557Q8N988 423 aaPredicted RBP18.67■□□□□ 0.58
HDAC6-225ENST00000483506 TXNDC5Q8NBS9 432 aaKnown RBP18.67■□□□□ 0.58
HDAC6-225ENST00000483506 HJURPQ8NCD3 748 aaPredicted RBP18.67■□□□□ 0.58
HDAC6-225ENST00000483506 NKD2Q969F2 451 aaPredicted RBP18.67■□□□□ 0.58
HDAC6-225ENST00000483506 PRMT1Q99873 361 aaKnown RBP18.67■□□□□ 0.58
HDAC6-225ENST00000483506 NUCKS1Q9H1E3 243 aaKnown RBP18.67■□□□□ 0.58
HDAC6-225ENST00000483506 EPC1Q9H2F5 836 aa18.67■□□□□ 0.58
HDAC6-225ENST00000483506 POLR3BQ9NW08 1133 aaPredicted RBP18.67■□□□□ 0.58
HDAC6-225ENST00000483506 IFNKQ9P0W0 207 aa18.67■□□□□ 0.58
HDAC6-225ENST00000483506 XPO7Q9UIA9 1087 aaKnown RBP18.67■□□□□ 0.58
HDAC6-225ENST00000483506 PRR23AA6NEV1 266 aa18.66■□□□□ 0.58
HDAC6-225ENST00000483506 M0QYT0 321 aa18.66■□□□□ 0.58
HDAC6-225ENST00000483506 SGK1O00141 431 aa18.66■□□□□ 0.58
HDAC6-225ENST00000483506 TSPAN3O60637 253 aa18.66■□□□□ 0.58
HDAC6-225ENST00000483506 KLF8O95600 359 aaPredicted RBP18.66■□□□□ 0.58
HDAC6-225ENST00000483506 APBB3O95704 486 aa18.66■□□□□ 0.58
HDAC6-225ENST00000483506 MOCS2O96007 188 aaPredicted RBP18.66■□□□□ 0.58
HDAC6-225ENST00000483506 CALB1P05937 261 aa18.66■□□□□ 0.58
HDAC6-225ENST00000483506 HNRNPLP14866 589 aaKnown RBP eCLIP18.66■□□□□ 0.58
HDAC6-225ENST00000483506 HOXC13P31276 330 aa18.66■□□□□ 0.58
HDAC6-225ENST00000483506 CNR2P34972 360 aa18.66■□□□□ 0.58
HDAC6-225ENST00000483506 FNTBP49356 437 aa18.66■□□□□ 0.58
HDAC6-225ENST00000483506 CXCR3P49682 368 aa18.66■□□□□ 0.58
HDAC6-225ENST00000483506 MRE11P49959 708 aa18.66■□□□□ 0.58
HDAC6-225ENST00000483506 C1QBPQ07021 282 aaKnown RBP18.66■□□□□ 0.58
HDAC6-225ENST00000483506 EIF4HQ15056 248 aaKnown RBP18.66■□□□□ 0.58
HDAC6-225ENST00000483506 ASIC2Q16515 512 aa18.66■□□□□ 0.58
HDAC6-225ENST00000483506 CRY1Q16526 586 aa18.66■□□□□ 0.58
HDAC6-225ENST00000483506 GEN1Q17RS7 908 aa18.66■□□□□ 0.58
HDAC6-225ENST00000483506 EOGTQ5NDL2 527 aa18.66■□□□□ 0.58
HDAC6-225ENST00000483506 SFMBT2Q5VUG0 894 aa18.66■□□□□ 0.58
HDAC6-225ENST00000483506 PPP1R2P3Q6NXS1 205 aa18.66■□□□□ 0.58
HDAC6-225ENST00000483506 SYN2Q92777 582 aaPredicted RBP18.66■□□□□ 0.58
HDAC6-225ENST00000483506 C11orf70Q9BRQ4 267 aa18.66■□□□□ 0.58
HDAC6-225ENST00000483506 PIGVQ9NUD9 493 aa18.66■□□□□ 0.58
HDAC6-225ENST00000483506 ADAM22Q9P0K1 906 aa18.66■□□□□ 0.58
HDAC6-225ENST00000483506 SLC12A6Q9UHW9 1150 aa18.66■□□□□ 0.58
HDAC6-225ENST00000483506 RIF1Q5UIP0 2472 aaKnown RBP18.66■□□□□ 0.58
HDAC6-225ENST00000483506 ITIH6Q6UXX5 1313 aa18.66■□□□□ 0.58
HDAC6-225ENST00000483506 EML5Q05BV3 1969 aa18.66■□□□□ 0.58
HDAC6-225ENST00000483506 OTOGLQ3ZCN5 2332 aa18.66■□□□□ 0.58
HDAC6-225ENST00000483506 TCRBV5S1A1TA0A578 114 aa18.65■□□□□ 0.58
HDAC6-225ENST00000483506 GOLGA8SH3BPF8 625 aa18.65■□□□□ 0.58
HDAC6-225ENST00000483506 NPC1O15118 1278 aa18.65■□□□□ 0.58
HDAC6-225ENST00000483506 F9P00740 461 aa18.65■□□□□ 0.58
HDAC6-225ENST00000483506 TFE3P19532 575 aaPredicted RBP18.65■□□□□ 0.58
HDAC6-225ENST00000483506 ABCB4P21439 1286 aa18.65■□□□□ 0.58
HDAC6-225ENST00000483506 HLA-FP30511 346 aa18.65■□□□□ 0.58
HDAC6-225ENST00000483506 SULT1E1P49888 294 aa18.65■□□□□ 0.58
HDAC6-225ENST00000483506 DGKEP52429 567 aa18.65■□□□□ 0.58
HDAC6-225ENST00000483506 RNASE9P60153 205 aaKnown RBP18.65■□□□□ 0.58
HDAC6-225ENST00000483506 BRMS1LQ5PSV4 323 aa18.65■□□□□ 0.58
HDAC6-225ENST00000483506 EGFLAMQ63HQ2 1017 aa18.65■□□□□ 0.58
HDAC6-225ENST00000483506 TMEM92Q6UXU6 159 aa18.65■□□□□ 0.58
HDAC6-225ENST00000483506 RASSF3Q86WH2 238 aa18.65■□□□□ 0.58
HDAC6-225ENST00000483506 CCDC33Q8N5R6 958 aa18.65■□□□□ 0.58
HDAC6-225ENST00000483506 C3orf20Q8ND61 904 aa18.65■□□□□ 0.58
HDAC6-225ENST00000483506 WFIKKN2Q8TEU8 576 aa18.65■□□□□ 0.58
HDAC6-225ENST00000483506 MYEOVQ96EZ4 313 aa18.65■□□□□ 0.58
HDAC6-225ENST00000483506 LMLNQ96KR4 655 aa18.65■□□□□ 0.58
HDAC6-225ENST00000483506 HHIPQ96QV1 700 aa18.65■□□□□ 0.58
HDAC6-225ENST00000483506 GABRG3Q99928 467 aa18.65■□□□□ 0.58
HDAC6-225ENST00000483506 METTL5Q9NRN9 209 aaKnown RBP18.65■□□□□ 0.58
HDAC6-225ENST00000483506 ARHGEF38Q9NXL2 777 aa18.65■□□□□ 0.58
HDAC6-225ENST00000483506 GPR179Q6PRD1 2367 aa18.65■□□□□ 0.58
HDAC6-225ENST00000483506 WDR87Q6ZQQ6 2873 aa18.65■□□□□ 0.58
HDAC6-225ENST00000483506 MUC22E2RYF6 1773 aaPredicted RBP18.64■□□□□ 0.57
HDAC6-225ENST00000483506 FAM170AA1A519 330 aa18.64■□□□□ 0.57
HDAC6-225ENST00000483506 TYW5A2RUC4 315 aaKnown RBP18.64■□□□□ 0.57
HDAC6-225ENST00000483506 TIMM44O43615 452 aa18.64■□□□□ 0.57
HDAC6-225ENST00000483506 TBL1XO60907 577 aa18.64■□□□□ 0.57
HDAC6-225ENST00000483506 ENDOD1O94919 500 aa18.64■□□□□ 0.57
HDAC6-225ENST00000483506 LMNAP02545 664 aaKnown RBP18.64■□□□□ 0.57
HDAC6-225ENST00000483506 TPM3P06753 285 aa18.64■□□□□ 0.57
HDAC6-225ENST00000483506 TACR2P21452 398 aa18.64■□□□□ 0.57
HDAC6-225ENST00000483506 NTSR1P30989 418 aa18.64■□□□□ 0.57
HDAC6-225ENST00000483506 RPS24P62847 133 aaKnown RBP18.64■□□□□ 0.57
HDAC6-225ENST00000483506 NME3Q13232 169 aa18.64■□□□□ 0.57
HDAC6-225ENST00000483506 ENPP2Q13822 863 aa18.64■□□□□ 0.57
HDAC6-225ENST00000483506 E2F5Q15329 346 aa18.64■□□□□ 0.57
HDAC6-225ENST00000483506 RAP1GAP2Q684P5 730 aa18.64■□□□□ 0.57
HDAC6-225ENST00000483506 ACAD10Q6JQN1 1059 aa18.64■□□□□ 0.57
HDAC6-225ENST00000483506 ASCL5Q7RTU5 278 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms