RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 GPRASP2Q96D09 838 aa21.31■■□□□ 1
COL13A1-208ENST00000479733 EPB41L1Q9H4G0 881 aa21.31■■□□□ 1
COL13A1-208ENST00000479733 SSX2IPQ9Y2D8 614 aa21.31■■□□□ 1
COL13A1-208ENST00000479733 ZNF195O14628 629 aa21.3■■□□□ 1
COL13A1-208ENST00000479733 PEX1O43933 1283 aa21.3■■□□□ 1
COL13A1-208ENST00000479733 GLRA3O75311 464 aa21.3■■□□□ 1
COL13A1-208ENST00000479733 PIGRP01833 764 aa21.3■■□□□ 1
COL13A1-208ENST00000479733 GPD1P21695 349 aa21.3■■□□□ 1
COL13A1-208ENST00000479733 RGS7P49802 495 aa21.3■■□□□ 1
COL13A1-208ENST00000479733 ZNF143P52747 638 aaPredicted RBP21.3■■□□□ 1
COL13A1-208ENST00000479733 SLC4A11Q8NBS3 891 aa21.3■■□□□ 1
COL13A1-208ENST00000479733 ATG4CQ96DT6 458 aa21.3■■□□□ 1
COL13A1-208ENST00000479733 GJD4Q96KN9 370 aaPredicted RBP21.3■■□□□ 1
COL13A1-208ENST00000479733 WDR55Q9H6Y2 383 aaPredicted RBP21.3■■□□□ 1
COL13A1-208ENST00000479733 LIN28AQ9H9Z2 209 aaKnown RBP21.3■■□□□ 1
COL13A1-208ENST00000479733 NOP56O00567 594 aaKnown RBP21.3■■□□□ 1
COL13A1-208ENST00000479733 DENRO43583 198 aaKnown RBP21.3■■□□□ 1
COL13A1-208ENST00000479733 AP1G1O43747 822 aa21.3■■□□□ 1
COL13A1-208ENST00000479733 FBXO21O94952 628 aa21.3■■□□□ 1
COL13A1-208ENST00000479733 TYK2P29597 1187 aa21.3■■□□□ 1
COL13A1-208ENST00000479733 ADARP55265 1226 aaKnown RBP21.3■■□□□ 1
COL13A1-208ENST00000479733 GBE1Q04446 702 aa21.3■■□□□ 1
COL13A1-208ENST00000479733 FLOT2Q14254 428 aa21.3■■□□□ 1
COL13A1-208ENST00000479733 RARS2Q5T160 578 aaKnown RBP21.3■■□□□ 1
COL13A1-208ENST00000479733 APBB2Q92870 758 aa21.3■■□□□ 1
COL13A1-208ENST00000479733 OR52B2Q96RD2 323 aa21.3■■□□□ 1
COL13A1-208ENST00000479733 SIKE1Q9BRV8 207 aa21.3■■□□□ 1
COL13A1-208ENST00000479733 LHX5Q9H2C1 402 aa21.3■■□□□ 1
COL13A1-208ENST00000479733 DNAJC28Q9NX36 388 aa21.3■■□□□ 1
COL13A1-208ENST00000479733 MYO18AQ92614 2054 aaKnown RBP21.3■■□□□ 1
COL13A1-208ENST00000479733 WDR46O15213 610 aaKnown RBP21.29■■□□□ 1
COL13A1-208ENST00000479733 AMHP03971 560 aa21.29■■□□□ 1
COL13A1-208ENST00000479733 XRCC1P18887 633 aaPredicted RBP21.29■■□□□ 1
COL13A1-208ENST00000479733 TCF7P36402 384 aaPredicted RBP21.29■■□□□ 1
COL13A1-208ENST00000479733 ABCG1P45844 678 aa21.29■■□□□ 1
COL13A1-208ENST00000479733 THOP1P52888 689 aa21.29■■□□□ 1
COL13A1-208ENST00000479733 CDKL1Q00532 357 aa21.29■■□□□ 1
COL13A1-208ENST00000479733 TMEM132AQ24JP5 1023 aa21.29■■□□□ 1
COL13A1-208ENST00000479733 MAP7D3Q8IWC1 876 aa21.29■■□□□ 1
COL13A1-208ENST00000479733 HEXIM2Q96MH2 286 aaKnown RBP21.29■■□□□ 1
COL13A1-208ENST00000479733 FRMD8Q9BZ67 464 aaPredicted RBP21.29■■□□□ 1
COL13A1-208ENST00000479733 ZNF302Q9NR11 478 aa21.29■■□□□ 1
COL13A1-208ENST00000479733 COPG2Q9UBF2 871 aa21.29■■□□□ 1
COL13A1-208ENST00000479733 DOCK5Q9H7D0 1870 aa21.29■■□□□ 1
COL13A1-208ENST00000479733 HSPA4LO95757 839 aa21.29■■□□□ 1
COL13A1-208ENST00000479733 SUPT20HL2P0C7V6 817 aa21.29■■□□□ 1
COL13A1-208ENST00000479733 CHRNA5P30532 468 aa21.29■■□□□ 1
COL13A1-208ENST00000479733 ARL2P36404 184 aa21.29■■□□□ 1
COL13A1-208ENST00000479733 SUPT20HL1Q3ZLR7 823 aa21.29■■□□□ 1
COL13A1-208ENST00000479733 PACS1Q6VY07 963 aa21.29■■□□□ 1
COL13A1-208ENST00000479733 SNX32Q86XE0 403 aa21.29■■□□□ 1
COL13A1-208ENST00000479733 CNPY3Q9BT09 278 aa21.29■■□□□ 1
COL13A1-208ENST00000479733 CEP41Q9BYV8 373 aa21.29■■□□□ 1
COL13A1-208ENST00000479733 SENP6Q9GZR1 1112 aaPredicted RBP21.29■■□□□ 1
COL13A1-208ENST00000479733 ZSCAN9O15535 394 aaPredicted RBP21.28■■□□□ 1
COL13A1-208ENST00000479733 ENDOD1O94919 500 aa21.28■■□□□ 1
COL13A1-208ENST00000479733 OATP04181 439 aa21.28■■□□□ 1
COL13A1-208ENST00000479733 SLC5A2P31639 672 aa21.28■■□□□ 1
COL13A1-208ENST00000479733 HACE1Q8IYU2 909 aa21.28■■□□□ 1
COL13A1-208ENST00000479733 STN1Q9H668 368 aaKnown RBP21.28■■□□□ 1
COL13A1-208ENST00000479733 DHX33Q9H6R0 707 aaKnown RBP21.28■■□□□ 1
COL13A1-208ENST00000479733 STX16-NPEPL1H3BU86 382 aa21.28■■□□□ 1
COL13A1-208ENST00000479733 STRNO43815 780 aa21.28■■□□□ 1
COL13A1-208ENST00000479733 TNFAIP8O95379 198 aa21.28■■□□□ 1
COL13A1-208ENST00000479733 PRKCGP05129 697 aa21.28■■□□□ 1
COL13A1-208ENST00000479733 CYLC2Q14093 348 aaPredicted RBP21.28■■□□□ 1
COL13A1-208ENST00000479733 KLC3Q6P597 504 aa21.28■■□□□ 1
COL13A1-208ENST00000479733 LILRA2Q8N149 483 aa21.28■■□□□ 1
COL13A1-208ENST00000479733 LRRC39Q96DD0 335 aa21.28■■□□□ 1
COL13A1-208ENST00000479733 MCRS1Q96EZ8 462 aa21.28■■□□□ 1
COL13A1-208ENST00000479733 NLRP4Q96MN2 994 aa21.28■■□□□ 1
COL13A1-208ENST00000479733 ELOVL4Q9GZR5 314 aa21.28■■□□□ 1
COL13A1-208ENST00000479733 MOCS1Q9NZB8 636 aa21.28■■□□□ 1
COL13A1-208ENST00000479733 C6orf203Q9P0P8 240 aaPredicted RBP21.28■■□□□ 1
COL13A1-208ENST00000479733 TBC1D12O60347 775 aa21.28■■□□□ 1
COL13A1-208ENST00000479733 ENO3P13929 434 aaPredicted RBP21.28■■□□□ 1
COL13A1-208ENST00000479733 GTF2A2P52657 109 aa21.28■■□□□ 1
COL13A1-208ENST00000479733 HSP90AA5PQ58FG0 334 aa21.28■■□□□ 1
COL13A1-208ENST00000479733 TSHZ1Q6ZSZ6 1077 aa21.28■■□□□ 1
COL13A1-208ENST00000479733 MRPS26Q9BYN8 205 aaKnown RBP21.28■■□□□ 1
COL13A1-208ENST00000479733 RBM38Q9H0Z9 239 aaKnown RBP21.28■■□□□ 1
COL13A1-208ENST00000479733 RPAP3Q9H6T3 665 aaPredicted RBP21.28■■□□□ 1
COL13A1-208ENST00000479733 PCDH18Q9HCL0 1135 aa21.28■■□□□ 1
COL13A1-208ENST00000479733 TNNC2P02585 160 aa21.27■■□□□ 1
COL13A1-208ENST00000479733 HNRNPCP07910 306 aaKnown RBP eCLIP21.27■■□□□ 1
COL13A1-208ENST00000479733 ERVK-10P10266 1014 aa21.27■■□□□ 1
COL13A1-208ENST00000479733 CPA3P15088 417 aa21.27■■□□□ 1
COL13A1-208ENST00000479733 ABCD1P33897 745 aa21.27■■□□□ 1
COL13A1-208ENST00000479733 GHRHRQ02643 423 aa21.27■■□□□ 1
COL13A1-208ENST00000479733 PTPN11Q06124 597 aaPredicted RBP21.27■■□□□ 1
COL13A1-208ENST00000479733 SLC10A2Q12908 348 aaPredicted RBP21.27■■□□□ 1
COL13A1-208ENST00000479733 NRF1Q16656 503 aa21.27■■□□□ 1
COL13A1-208ENST00000479733 FSCBQ5H9T9 825 aa21.27■■□□□ 1
COL13A1-208ENST00000479733 ZNF667Q5HYK9 610 aa21.27■■□□□ 1
COL13A1-208ENST00000479733 FAM156AQ8NDB6 213 aa21.27■■□□□ 1
COL13A1-208ENST00000479733 BHLHE22Q8NFJ8 381 aaPredicted RBP21.27■■□□□ 1
COL13A1-208ENST00000479733 DCDC2Q9UHG0 476 aa21.27■■□□□ 1
COL13A1-208ENST00000479733 RPS6KL1Q9Y6S9 549 aa21.27■■□□□ 1
COL13A1-208ENST00000479733 FAM189A1O60320 539 aa21.27■■□□□ 1
COL13A1-208ENST00000479733 DESP17661 470 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms