RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, human

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NSMCE4A-208	ENST00000477289	KCNB1	Q14721	858 aa		4.87	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	FAM187B	Q17R55	369 aa		4.87	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	TMEM240	Q5SV17	173 aa		4.87	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	CDCA2	Q69YH5	1023 aa	Predicted RBP	4.87	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	ARMCX5	Q6P1M9	558 aa		4.87	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	EP400NL	Q6ZTU2	488 aa		4.87	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	USP30	Q70CQ3	517 aa		4.87	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	ZNF720	Q7Z2F6	126 aa		4.87	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	FILIP1	Q7Z7B0	1213 aa		4.87	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	ZC3H7A	Q8IWR0	971 aa	Known RBP	4.87	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	CD302	Q8IX05	232 aa		4.87	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	GPR135	Q8IZ08	494 aa		4.87	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	ZNF808	Q8N4W9	903 aa	Predicted RBP	4.87	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	CISD2	Q8N5K1	135 aa	Known RBP	4.87	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	AMER2	Q8N7J2	671 aa		4.87	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	TRIML1	Q8N9V2	468 aa		4.87	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	IL17D	Q8TAD2	202 aa		4.87	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	CACTIN	Q8WUQ7	758 aa	Known RBP	4.87	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	ASB15	Q8WXK1	588 aa		4.87	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	POMGNT1	Q8WZA1	660 aa		4.87	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	ACAP3	Q96P50	834 aa		4.87	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	RAD9A	Q99638	391 aa		4.87	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	GDF15	Q99988	308 aa		4.87	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	APOL6	Q9BWW8	343 aa		4.87	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	TRIM8	Q9BZR9	551 aa		4.87	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	NAT10	Q9H0A0	1025 aa	Known RBP	4.87	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	OR10A5	Q9H207	317 aa		4.87	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	C12orf65	Q9H3J6	166 aa	Known RBP	4.87	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	FZD8	Q9H461	694 aa		4.87	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	GOLPH3L	Q9H4A5	285 aa		4.87	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	ST6GALNAC4	Q9H4F1	302 aa		4.87	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	ELAC1	Q9H777	363 aa	Known RBP	4.87	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	SLC28A3	Q9HAS3	691 aa		4.87	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	IFT122	Q9HBG6	1241 aa		4.87	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	POLD4	Q9HCU8	107 aa		4.87	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	AGPAT5	Q9NUQ2	364 aa		4.87	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	TMEM161A	Q9NX61	479 aa		4.87	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	ANKFY1	Q9P2R3	1169 aa		4.87	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	STK39	Q9UEW8	545 aa		4.87	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	PUF60	Q9UHX1	559 aa	Known RBP	4.87	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	TBX20	Q9UMR3	447 aa		4.87	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	TNFSF13B	Q9Y275	285 aa		4.87	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	FRMD4B	Q9Y2L6	1034 aa		4.87	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	INSL6	Q9Y581	213 aa		4.87	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	TNFRSF18	Q9Y5U5	241 aa		4.87	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	CNTNAP2	Q9UHC6	1331 aa		4.87	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	PCSK5	Q92824	1860 aa		4.86	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	EVPL	Q92817	2033 aa		4.86	□□□□□ -1.63
NSMCE4A-208	ENST00000477289		A0A087X0B3	334 aa		4.86	□□□□□ -1.63
NSMCE4A-208	ENST00000477289		A0A0G2JNJ9	132 aa		4.86	□□□□□ -1.63
NSMCE4A-208	ENST00000477289		A0A0U1RQF3	1178 aa		4.86	□□□□□ -1.63
NSMCE4A-208	ENST00000477289		A0A1B0GUA9	196 aa		4.86	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	ARHGEF37	A1IGU5	675 aa		4.86	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	TBKBP1	A7MCY6	615 aa		4.86	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	SCD	O00767	359 aa		4.86	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	CETN3	O15182	167 aa		4.86	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	OGT	O15294	1046 aa		4.86	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	TSPAN1	O60635	241 aa		4.86	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	EXOC3	O60645	756 aa		4.86	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	CSDE1	O75534	798 aa	Known RBP	4.86	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	PRPF6	O94906	941 aa	Known RBP	4.86	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	RHOBTB3	O94955	611 aa		4.86	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	CLTA	P09496	248 aa		4.86	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	C1S	P09871	688 aa		4.86	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	KRT13	P13646	458 aa		4.86	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	ARF4	P18085	180 aa	Predicted RBP	4.86	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	TRIM21	P19474	475 aa	Known RBP	4.86	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	ITGB8	P26012	769 aa		4.86	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	NMT1	P30419	496 aa	Known RBP	4.86	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	RPS19	P39019	145 aa	Known RBP	4.86	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	MRE11	P49959	708 aa		4.86	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	WDR5	P61964	334 aa	Known RBP	4.86	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	GTF2B	Q00403	316 aa		4.86	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	KRT17	Q04695	432 aa		4.86	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	HGFAC	Q04756	655 aa		4.86	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	HNRNPA0	Q13151	305 aa	Known RBP	4.86	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	MAPK7	Q13164	816 aa		4.86	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	PNOC	Q13519	176 aa		4.86	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	SHH	Q15465	462 aa		4.86	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	CAMK4	Q16566	473 aa		4.86	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	KNOP1	Q1ED39	458 aa	Known RBP	4.86	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	LONRF2	Q1L5Z9	754 aa		4.86	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	CCDC183	Q5T5S1	534 aa		4.86	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	ZNF658	Q5TYW1	1059 aa	Predicted RBP	4.86	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	ECHDC2	Q86YB7	292 aa		4.86	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	HERC6	Q8IVU3	1022 aa		4.86	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	NELFCD	Q8IXH7	590 aa		4.86	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	THNSL1	Q8IYQ7	743 aa		4.86	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	GRAMD1C	Q8IYS0	662 aa		4.86	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	DAW1	Q8N136	415 aa		4.86	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	CCDC150	Q8NCX0	1101 aa		4.86	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	TMEM161B	Q8NDZ6	487 aa		4.86	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	GSTCD	Q8NEC7	633 aa		4.86	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	ANKRD20A12P	Q8NF67	263 aa		4.86	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	ENGASE	Q8NFI3	743 aa		4.86	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	TOP1MT	Q969P6	601 aa		4.86	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	PPP2R3C	Q969Q6	453 aa		4.86	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	DNAJC19	Q96DA6	116 aa		4.86	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	CPB2	Q96IY4	423 aa		4.86	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	CTAGE1	Q96RT6	745 aa		4.86	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms