RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 TRIM62Q9BVG3 475 aa9.81□□□□□ -0.84
PDPN-204ENST00000475043 SLC2A11Q9BYW1 496 aa9.81□□□□□ -0.84
PDPN-204ENST00000475043 VPS45Q9NRW7 570 aa9.81□□□□□ -0.84
PDPN-204ENST00000475043 SAMSN1Q9NSI8 373 aaKnown RBP9.81□□□□□ -0.84
PDPN-204ENST00000475043 CALCOCO1Q9P1Z2 691 aa9.81□□□□□ -0.84
PDPN-204ENST00000475043 CYTH4Q9UIA0 394 aa9.81□□□□□ -0.84
PDPN-204ENST00000475043 AJAP1Q9UKB5 411 aaPredicted RBP9.81□□□□□ -0.84
PDPN-204ENST00000475043 CLEC4EQ9ULY5 219 aa9.81□□□□□ -0.84
PDPN-204ENST00000475043 STON1Q9Y6Q2 735 aa9.81□□□□□ -0.84
PDPN-204ENST00000475043 WDR87Q6ZQQ6 2873 aa9.81□□□□□ -0.84
PDPN-204ENST00000475043 PLXND1Q9Y4D7 1925 aa9.81□□□□□ -0.84
PDPN-204ENST00000475043 EP300Q09472 2414 aaPredicted RBP9.81□□□□□ -0.84
PDPN-204ENST00000475043 GVINP1Q7Z2Y8 2422 aa9.8□□□□□ -0.84
PDPN-204ENST00000475043 GOLGA6L7A0A1B0GV03 622 aa9.8□□□□□ -0.84
PDPN-204ENST00000475043 BCLAF3A2AJT9 711 aaKnown RBP9.8□□□□□ -0.84
PDPN-204ENST00000475043 FOXN3O00409 490 aaPredicted RBP9.8□□□□□ -0.84
PDPN-204ENST00000475043 GFRA2O00451 464 aa9.8□□□□□ -0.84
PDPN-204ENST00000475043 PAPSS1O43252 624 aaPredicted RBP9.8□□□□□ -0.84
PDPN-204ENST00000475043 ACSL4O60488 711 aa9.8□□□□□ -0.84
PDPN-204ENST00000475043 SYNCRIPO60506 623 aaKnown RBP9.8□□□□□ -0.84
PDPN-204ENST00000475043 TBL1XO60907 577 aa9.8□□□□□ -0.84
PDPN-204ENST00000475043 LATS1O95835 1130 aa9.8□□□□□ -0.84
PDPN-204ENST00000475043 MOCS2O96007 188 aaPredicted RBP9.8□□□□□ -0.84
PDPN-204ENST00000475043 IGLV3-27P01718 113 aa9.8□□□□□ -0.84
PDPN-204ENST00000475043 FYNP06241 537 aa9.8□□□□□ -0.84
PDPN-204ENST00000475043 PNMA6AP0CW24 399 aaPredicted RBP9.8□□□□□ -0.84
PDPN-204ENST00000475043 NDUFV2P19404 249 aa9.8□□□□□ -0.84
PDPN-204ENST00000475043 HOXD9P28356 352 aaPredicted RBP9.8□□□□□ -0.84
PDPN-204ENST00000475043 KRT9P35527 623 aa9.8□□□□□ -0.84
PDPN-204ENST00000475043 RPL34P49207 117 aaKnown RBP9.8□□□□□ -0.84
PDPN-204ENST00000475043 SGSHP51688 502 aa9.8□□□□□ -0.84
PDPN-204ENST00000475043 YWHAZP63104 245 aaKnown RBP9.8□□□□□ -0.84
PDPN-204ENST00000475043 RING1Q06587 406 aa9.8□□□□□ -0.84
PDPN-204ENST00000475043 PDCLQ13371 301 aa9.8□□□□□ -0.84
PDPN-204ENST00000475043 RAPGEF1Q13905 1077 aa9.8□□□□□ -0.84
PDPN-204ENST00000475043 STARD3Q14849 445 aa9.8□□□□□ -0.84
PDPN-204ENST00000475043 EIF4HQ15056 248 aaKnown RBP9.8□□□□□ -0.84
PDPN-204ENST00000475043 E2F5Q15329 346 aa9.8□□□□□ -0.84
PDPN-204ENST00000475043 MEA1Q16626 185 aa9.8□□□□□ -0.84
PDPN-204ENST00000475043 MAP7D1Q3KQU3 841 aa9.8□□□□□ -0.84
PDPN-204ENST00000475043 TCP11X2Q5H9J9 407 aa9.8□□□□□ -0.84
PDPN-204ENST00000475043 PLA2G2CQ5R387 149 aa9.8□□□□□ -0.84
PDPN-204ENST00000475043 SYPL2Q5VXT5 272 aa9.8□□□□□ -0.84
PDPN-204ENST00000475043 TCEAL6Q6IPX3 200 aa9.8□□□□□ -0.84
PDPN-204ENST00000475043 KIAA1324Q6UXG2 1013 aaKnown RBP9.8□□□□□ -0.84
PDPN-204ENST00000475043 LPCAT2Q7L5N7 544 aa9.8□□□□□ -0.84
PDPN-204ENST00000475043 TMEM110Q86TL2 294 aa9.8□□□□□ -0.84
PDPN-204ENST00000475043 DEFB119Q8N690 84 aa9.8□□□□□ -0.84
PDPN-204ENST00000475043 GPT2Q8TD30 523 aa9.8□□□□□ -0.84
PDPN-204ENST00000475043 DQX1Q8TE96 717 aaKnown RBP9.8□□□□□ -0.84
PDPN-204ENST00000475043 SORCS1Q8WY21 1168 aa9.8□□□□□ -0.84
PDPN-204ENST00000475043 PIGKQ92643 395 aa9.8□□□□□ -0.84
PDPN-204ENST00000475043 TCEAL3Q969E4 200 aa9.8□□□□□ -0.84
PDPN-204ENST00000475043 PIWIL1Q96J94 861 aaKnown RBP9.8□□□□□ -0.84
PDPN-204ENST00000475043 SERPINB11Q96P15 392 aa9.8□□□□□ -0.84
PDPN-204ENST00000475043 NOX5Q96PH1 765 aa9.8□□□□□ -0.84
PDPN-204ENST00000475043 SLC6A17Q9H1V8 727 aa9.8□□□□□ -0.84
PDPN-204ENST00000475043 PDCL3Q9H2J4 239 aa9.8□□□□□ -0.84
PDPN-204ENST00000475043 POPDC2Q9HBU9 364 aa9.8□□□□□ -0.84
PDPN-204ENST00000475043 SIX2Q9NPC8 291 aa9.8□□□□□ -0.84
PDPN-204ENST00000475043 RXFP3Q9NSD7 469 aa9.8□□□□□ -0.84
PDPN-204ENST00000475043 ELOVL2Q9NXB9 296 aa9.8□□□□□ -0.84
PDPN-204ENST00000475043 STIM2Q9P246 746 aa9.8□□□□□ -0.84
PDPN-204ENST00000475043 STOML2Q9UJZ1 356 aa9.8□□□□□ -0.84
PDPN-204ENST00000475043 TLR6Q9Y2C9 796 aa9.8□□□□□ -0.84
PDPN-204ENST00000475043 NFE2L3Q9Y4A8 694 aa9.8□□□□□ -0.84
PDPN-204ENST00000475043 TNRC6BQ9UPQ9 1833 aaKnown RBP9.79□□□□□ -0.84
PDPN-204ENST00000475043 ABCA7Q8IZY2 2146 aa9.79□□□□□ -0.84
PDPN-204ENST00000475043 TYW5A2RUC4 315 aaKnown RBP9.79□□□□□ -0.84
PDPN-204ENST00000475043 SLC30A4O14863 429 aa9.79□□□□□ -0.84
PDPN-204ENST00000475043 KHNYNO15037 678 aaKnown RBP9.79□□□□□ -0.84
PDPN-204ENST00000475043 NPC1O15118 1278 aa9.79□□□□□ -0.84
PDPN-204ENST00000475043 IRAK2O43187 625 aa9.79□□□□□ -0.84
PDPN-204ENST00000475043 AP5Z1O43299 807 aa9.79□□□□□ -0.84
PDPN-204ENST00000475043 ZNF217O75362 1048 aa9.79□□□□□ -0.84
PDPN-204ENST00000475043 APOEP02649 317 aa9.79□□□□□ -0.84
PDPN-204ENST00000475043 EPHX1P07099 455 aa9.79□□□□□ -0.84
PDPN-204ENST00000475043 HLA-FP30511 346 aa9.79□□□□□ -0.84
PDPN-204ENST00000475043 SLC6A4P31645 630 aa9.79□□□□□ -0.84
PDPN-204ENST00000475043 IL12RB1P42701 662 aa9.79□□□□□ -0.84
PDPN-204ENST00000475043 RPL6Q02878 288 aaKnown RBP9.79□□□□□ -0.84
PDPN-204ENST00000475043 ZNF234Q14588 700 aa9.79□□□□□ -0.84
PDPN-204ENST00000475043 TAF5Q15542 800 aa9.79□□□□□ -0.84
PDPN-204ENST00000475043 DCAF6Q58WW2 860 aa9.79□□□□□ -0.84
PDPN-204ENST00000475043 CT47A1Q5JQC4 288 aaPredicted RBP9.79□□□□□ -0.84
PDPN-204ENST00000475043 PIK3R6Q5UE93 754 aa9.79□□□□□ -0.84
PDPN-204ENST00000475043 IL31Q6EBC2 164 aa9.79□□□□□ -0.84
PDPN-204ENST00000475043 SASS6Q6UVJ0 657 aa9.79□□□□□ -0.84
PDPN-204ENST00000475043 SERPINA13PQ6UXR4 307 aa9.79□□□□□ -0.84
PDPN-204ENST00000475043 SLC36A4Q6YBV0 504 aa9.79□□□□□ -0.84
PDPN-204ENST00000475043 CHST9Q7L1S5 443 aa9.79□□□□□ -0.84
PDPN-204ENST00000475043 TAC4Q86UU9 113 aa9.79□□□□□ -0.84
PDPN-204ENST00000475043 SLC47A2Q86VL8 602 aa9.79□□□□□ -0.84
PDPN-204ENST00000475043 CCDC117Q8IWD4 279 aaPredicted RBP9.79□□□□□ -0.84
PDPN-204ENST00000475043 C1orf131Q8NDD1 294 aaKnown RBP9.79□□□□□ -0.84
PDPN-204ENST00000475043 PPP1R13BQ96KQ4 1090 aa9.79□□□□□ -0.84
PDPN-204ENST00000475043 FCRL2Q96LA5 508 aaPredicted RBP9.79□□□□□ -0.84
PDPN-204ENST00000475043 MRGPRX1Q96LB2 322 aa9.79□□□□□ -0.84
PDPN-204ENST00000475043 CPXM1Q96SM3 734 aa9.79□□□□□ -0.84
PDPN-204ENST00000475043 DDX50Q9BQ39 737 aaKnown RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms