RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 NFATC1O95644 943 aa17.44■□□□□ 0.38
CCM2-205ENST00000472223 FTCDO95954 541 aa17.44■□□□□ 0.38
CCM2-205ENST00000472223 RARAP10276 462 aa17.44■□□□□ 0.38
CCM2-205ENST00000472223 FCARP24071 287 aa17.44■□□□□ 0.38
CCM2-205ENST00000472223 MLLT6P55198 1093 aaPredicted RBP17.44■□□□□ 0.38
CCM2-205ENST00000472223 ZXDBP98169 803 aa17.44■□□□□ 0.38
CCM2-205ENST00000472223 SLC25A11Q02978 314 aaKnown RBP17.44■□□□□ 0.38
CCM2-205ENST00000472223 HTR4Q13639 388 aa17.44■□□□□ 0.38
CCM2-205ENST00000472223 PDK2Q15119 407 aa17.44■□□□□ 0.38
CCM2-205ENST00000472223 RPS6KA1Q15418 735 aa17.44■□□□□ 0.38
CCM2-205ENST00000472223 SMTNL2Q2TAL5 461 aa17.44■□□□□ 0.38
CCM2-205ENST00000472223 RAB6CQ53S08 254 aa17.44■□□□□ 0.38
CCM2-205ENST00000472223 PPP6R3Q5H9R7 873 aaPredicted RBP17.44■□□□□ 0.38
CCM2-205ENST00000472223 KCNT1Q5JUK3 1230 aa17.44■□□□□ 0.38
CCM2-205ENST00000472223 DAB2IPQ5VWQ8 1189 aa17.44■□□□□ 0.38
CCM2-205ENST00000472223 RAP1GAP2Q684P5 730 aa17.44■□□□□ 0.38
CCM2-205ENST00000472223 VITQ6UXI7 678 aa17.44■□□□□ 0.38
CCM2-205ENST00000472223 NT5DC3Q86UY8 548 aa17.44■□□□□ 0.38
CCM2-205ENST00000472223 BBS7Q8IWZ6 715 aa17.44■□□□□ 0.38
CCM2-205ENST00000472223 CPXM2Q8N436 756 aa17.44■□□□□ 0.38
CCM2-205ENST00000472223 ARFGAP1Q8N6T3 406 aa17.44■□□□□ 0.38
CCM2-205ENST00000472223 ADAMTS19Q8TE59 1207 aa17.44■□□□□ 0.38
CCM2-205ENST00000472223 FGF14Q92915 247 aa17.44■□□□□ 0.38
CCM2-205ENST00000472223 SNRNP25Q9BV90 132 aaKnown RBP17.44■□□□□ 0.38
CCM2-205ENST00000472223 RAB6CQ9H0N0 254 aa17.44■□□□□ 0.38
CCM2-205ENST00000472223 GOLPH3Q9H4A6 298 aa17.44■□□□□ 0.38
CCM2-205ENST00000472223 BRD9Q9H8M2 597 aa17.44■□□□□ 0.38
CCM2-205ENST00000472223 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.44■□□□□ 0.38
CCM2-205ENST00000472223 DONSONQ9NYP3 566 aa17.44■□□□□ 0.38
CCM2-205ENST00000472223 JRKLQ9Y4A0 524 aa17.44■□□□□ 0.38
CCM2-205ENST00000472223 H3BRJ5 948 aa17.43■□□□□ 0.38
CCM2-205ENST00000472223 CHADO15335 359 aa17.43■□□□□ 0.38
CCM2-205ENST00000472223 CREB3O43889 395 aa17.43■□□□□ 0.38
CCM2-205ENST00000472223 SRGAP2O75044 1071 aa17.43■□□□□ 0.38
CCM2-205ENST00000472223 ADH1CP00326 375 aa17.43■□□□□ 0.38
CCM2-205ENST00000472223 KLKB1P03952 638 aa17.43■□□□□ 0.38
CCM2-205ENST00000472223 TUBB4AP04350 444 aa17.43■□□□□ 0.38
CCM2-205ENST00000472223 TACR2P21452 398 aa17.43■□□□□ 0.38
CCM2-205ENST00000472223 CTNNA2P26232 953 aa17.43■□□□□ 0.38
CCM2-205ENST00000472223 GDI1P31150 447 aa17.43■□□□□ 0.38
CCM2-205ENST00000472223 L1CAMP32004 1257 aa17.43■□□□□ 0.38
CCM2-205ENST00000472223 HTR7P34969 479 aa17.43■□□□□ 0.38
CCM2-205ENST00000472223 CDH6P55285 790 aa17.43■□□□□ 0.38
CCM2-205ENST00000472223 RWDD2BP57060 319 aa17.43■□□□□ 0.38
CCM2-205ENST00000472223 TAS2R40P59535 323 aa17.43■□□□□ 0.38
CCM2-205ENST00000472223 FCHO2Q0JRZ9 810 aa17.43■□□□□ 0.38
CCM2-205ENST00000472223 AUHQ13825 339 aaKnown RBP17.43■□□□□ 0.38
CCM2-205ENST00000472223 MPPE1Q53F39 396 aa17.43■□□□□ 0.38
CCM2-205ENST00000472223 MS4A13Q5J8X5 152 aa17.43■□□□□ 0.38
CCM2-205ENST00000472223 TTC39BQ5VTQ0 682 aaPredicted RBP17.43■□□□□ 0.38
CCM2-205ENST00000472223 Q6ZNB5 142 aa17.43■□□□□ 0.38
CCM2-205ENST00000472223 LGI2Q8N0V4 545 aa17.43■□□□□ 0.38
CCM2-205ENST00000472223 CPA6Q8N4T0 437 aa17.43■□□□□ 0.38
CCM2-205ENST00000472223 CSGALNACT1Q8TDX6 532 aa17.43■□□□□ 0.38
CCM2-205ENST00000472223 DDI1Q8WTU0 396 aa17.43■□□□□ 0.38
CCM2-205ENST00000472223 IRF7Q92985 503 aa17.43■□□□□ 0.38
CCM2-205ENST00000472223 TMA16Q96EY4 203 aaKnown RBP17.43■□□□□ 0.38
CCM2-205ENST00000472223 RBM41Q96IZ5 413 aaKnown RBP17.43■□□□□ 0.38
CCM2-205ENST00000472223 RPRD1AQ96P16 312 aaPredicted RBP17.43■□□□□ 0.38
CCM2-205ENST00000472223 ASB2Q96Q27 587 aa17.43■□□□□ 0.38
CCM2-205ENST00000472223 MAK16Q9BXY0 300 aaKnown RBP17.43■□□□□ 0.38
CCM2-205ENST00000472223 KCNK12Q9HB15 430 aa17.43■□□□□ 0.38
CCM2-205ENST00000472223 STOML2Q9UJZ1 356 aa17.43■□□□□ 0.38
CCM2-205ENST00000472223 PCDHA3Q9Y5H8 950 aa17.43■□□□□ 0.38
CCM2-205ENST00000472223 HS3ST4Q9Y661 456 aa17.43■□□□□ 0.38
CCM2-205ENST00000472223 WNT6Q9Y6F9 365 aa17.43■□□□□ 0.38
CCM2-205ENST00000472223 LOC730098B7Z3J9 87 aa17.42■□□□□ 0.38
CCM2-205ENST00000472223 EEF2KO00418 725 aaKnown RBP17.42■□□□□ 0.38
CCM2-205ENST00000472223 SCAMP3O14828 347 aaKnown RBP17.42■□□□□ 0.38
CCM2-205ENST00000472223 ZRANB2O95218 330 aaKnown RBP eCLIP17.42■□□□□ 0.38
CCM2-205ENST00000472223 KRT1P04264 644 aa17.42■□□□□ 0.38
CCM2-205ENST00000472223 CTNNA1P35221 906 aaKnown RBP17.42■□□□□ 0.38
CCM2-205ENST00000472223 TPI1P60174 286 aa17.42■□□□□ 0.38
CCM2-205ENST00000472223 AMPD2Q01433 879 aa17.42■□□□□ 0.38
CCM2-205ENST00000472223 GRM2Q14416 872 aa17.42■□□□□ 0.38
CCM2-205ENST00000472223 RWDD4Q6NW29 188 aaKnown RBP17.42■□□□□ 0.38
CCM2-205ENST00000472223 POTEHQ6S545 545 aa17.42■□□□□ 0.38
CCM2-205ENST00000472223 CCDC50Q8IVM0 306 aa17.42■□□□□ 0.38
CCM2-205ENST00000472223 RCOR2Q8IZ40 523 aa17.42■□□□□ 0.38
CCM2-205ENST00000472223 ZNF557Q8N988 423 aaPredicted RBP17.42■□□□□ 0.38
CCM2-205ENST00000472223 ST13P5Q8NFI4 369 aaPredicted RBP17.42■□□□□ 0.38
CCM2-205ENST00000472223 PEBP4Q96S96 227 aa17.42■□□□□ 0.38
CCM2-205ENST00000472223 CALN1Q9BXU9 219 aa17.42■□□□□ 0.38
CCM2-205ENST00000472223 CATSPERBQ9H7T0 1116 aa17.42■□□□□ 0.38
CCM2-205ENST00000472223 VANGL2Q9ULK5 521 aa17.42■□□□□ 0.38
CCM2-205ENST00000472223 GOLGA6L7A0A1B0GV03 622 aa17.41■□□□□ 0.38
CCM2-205ENST00000472223 LRRD1A4D1F6 860 aa17.41■□□□□ 0.38
CCM2-205ENST00000472223 E9PAM4 449 aa17.41■□□□□ 0.38
CCM2-205ENST00000472223 KIF2AO00139 706 aaPredicted RBP17.41■□□□□ 0.38
CCM2-205ENST00000472223 TSPAN3O60637 253 aa17.41■□□□□ 0.38
CCM2-205ENST00000472223 IL1R2P27930 398 aa17.41■□□□□ 0.38
CCM2-205ENST00000472223 PFKPQ01813 784 aa17.41■□□□□ 0.38
CCM2-205ENST00000472223 NRG1Q02297 640 aaPredicted RBP17.41■□□□□ 0.38
CCM2-205ENST00000472223 GAD2Q05329 585 aa17.41■□□□□ 0.38
CCM2-205ENST00000472223 DPYSL2Q16555 572 aa17.41■□□□□ 0.38
CCM2-205ENST00000472223 ANO4Q32M45 955 aa17.41■□□□□ 0.38
CCM2-205ENST00000472223 MEI1Q5TIA1 1274 aa17.41■□□□□ 0.38
CCM2-205ENST00000472223 PIK3R6Q5UE93 754 aa17.41■□□□□ 0.38
CCM2-205ENST00000472223 TPGS1Q6ZTW0 290 aa17.41■□□□□ 0.38
CCM2-205ENST00000472223 KATNAL2Q8IYT4 538 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms