RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 ACRBPQ8NEB7 543 aa4.99□□□□□ -1.61
SF3B1-208ENST00000470268 ZMIZ2Q8NF64 920 aa4.99□□□□□ -1.61
SF3B1-208ENST00000470268 UBA3Q8TBC4 463 aa4.99□□□□□ -1.61
SF3B1-208ENST00000470268 MYCBPAPQ8TBZ2 947 aa4.99□□□□□ -1.61
SF3B1-208ENST00000470268 SPATA18Q8TC71 538 aa4.99□□□□□ -1.61
SF3B1-208ENST00000470268 MYLPFQ96A32 169 aa4.99□□□□□ -1.61
SF3B1-208ENST00000470268 TNIP3Q96KP6 325 aa4.99□□□□□ -1.61
SF3B1-208ENST00000470268 PGLYRP2Q96PD5 576 aa4.99□□□□□ -1.61
SF3B1-208ENST00000470268 TGS1Q96RS0 853 aaKnown RBP4.99□□□□□ -1.61
SF3B1-208ENST00000470268 KCNK16Q96T55 309 aa4.99□□□□□ -1.61
SF3B1-208ENST00000470268 FOXQ1Q9C009 403 aa4.99□□□□□ -1.61
SF3B1-208ENST00000470268 ZNF518BQ9C0D4 1074 aa4.99□□□□□ -1.61
SF3B1-208ENST00000470268 ZNHIT6Q9NWK9 470 aaKnown RBP4.99□□□□□ -1.61
SF3B1-208ENST00000470268 MTRRQ9UBK8 725 aa4.99□□□□□ -1.61
SF3B1-208ENST00000470268 ADGRE2Q9UHX3 823 aa4.99□□□□□ -1.61
SF3B1-208ENST00000470268 KIAA1671Q9BY89 1806 aa4.98□□□□□ -1.61
SF3B1-208ENST00000470268 VWA8A3KMH1 1905 aa4.98□□□□□ -1.61
SF3B1-208ENST00000470268 CEP290O15078 2479 aa4.98□□□□□ -1.61
SF3B1-208ENST00000470268 ARHGEF37A1IGU5 675 aa4.98□□□□□ -1.61
SF3B1-208ENST00000470268 TMCO5BA8MYB1 307 aa4.98□□□□□ -1.61
SF3B1-208ENST00000470268 H3BNC9 293 aa4.98□□□□□ -1.61
SF3B1-208ENST00000470268 LPXNO60711 386 aa4.98□□□□□ -1.61
SF3B1-208ENST00000470268 LRIG2O94898 1065 aa4.98□□□□□ -1.61
SF3B1-208ENST00000470268 NDUFA10O95299 355 aa4.98□□□□□ -1.61
SF3B1-208ENST00000470268 RB1P06400 928 aa4.98□□□□□ -1.61
SF3B1-208ENST00000470268 CNPP09543 421 aaKnown RBP4.98□□□□□ -1.61
SF3B1-208ENST00000470268 BDNFP23560 247 aa4.98□□□□□ -1.61
SF3B1-208ENST00000470268 CYP2F1P24903 491 aa4.98□□□□□ -1.61
SF3B1-208ENST00000470268 ADORA2BP29275 332 aa4.98□□□□□ -1.61
SF3B1-208ENST00000470268 OR1D2P34982 312 aa4.98□□□□□ -1.61
SF3B1-208ENST00000470268 ARPP19P56211 112 aa4.98□□□□□ -1.61
SF3B1-208ENST00000470268 BPIFB4P59827 614 aa4.98□□□□□ -1.61
SF3B1-208ENST00000470268 NOMO3P69849 1222 aa4.98□□□□□ -1.61
SF3B1-208ENST00000470268 SMAD3P84022 425 aaKnown RBP4.98□□□□□ -1.61
SF3B1-208ENST00000470268 GPR17Q13304 367 aa4.98□□□□□ -1.61
SF3B1-208ENST00000470268 BMS1Q14692 1282 aaKnown RBP4.98□□□□□ -1.61
SF3B1-208ENST00000470268 RAB30Q15771 203 aa4.98□□□□□ -1.61
SF3B1-208ENST00000470268 SLC18A3Q16572 532 aa4.98□□□□□ -1.61
SF3B1-208ENST00000470268 GOLGA7BQ2TAP0 167 aa4.98□□□□□ -1.61
SF3B1-208ENST00000470268 KIAA1841Q6NSI8 718 aa4.98□□□□□ -1.61
SF3B1-208ENST00000470268 CDPF1Q6NVV7 123 aa4.98□□□□□ -1.61
SF3B1-208ENST00000470268 UNC5AQ6ZN44 842 aa4.98□□□□□ -1.61
SF3B1-208ENST00000470268 CLEC20AQ6ZU45 233 aa4.98□□□□□ -1.61
SF3B1-208ENST00000470268 UBE3DQ7Z6J8 389 aa4.98□□□□□ -1.61
SF3B1-208ENST00000470268 ZNF677Q86XU0 584 aa4.98□□□□□ -1.61
SF3B1-208ENST00000470268 THEM5Q8N1Q8 247 aa4.98□□□□□ -1.61
SF3B1-208ENST00000470268 CELF2-AS1Q8N7Q2 184 aa4.98□□□□□ -1.61
SF3B1-208ENST00000470268 MFSD2AQ8NA29 543 aa4.98□□□□□ -1.61
SF3B1-208ENST00000470268 C1orf131Q8NDD1 294 aaKnown RBP4.98□□□□□ -1.61
SF3B1-208ENST00000470268 STKLD1Q8NE28 680 aa4.98□□□□□ -1.61
SF3B1-208ENST00000470268 GDPD5Q8WTR4 605 aa4.98□□□□□ -1.61
SF3B1-208ENST00000470268 CYB5D2Q8WUJ1 264 aa4.98□□□□□ -1.61
SF3B1-208ENST00000470268 SLC35F5Q8WV83 523 aa4.98□□□□□ -1.61
SF3B1-208ENST00000470268 CPA5Q8WXQ8 436 aa4.98□□□□□ -1.61
SF3B1-208ENST00000470268 ARNTL2Q8WYA1 636 aa4.98□□□□□ -1.61
SF3B1-208ENST00000470268 TIFAQ96CG3 184 aa4.98□□□□□ -1.61
SF3B1-208ENST00000470268 PPP1R13BQ96KQ4 1090 aa4.98□□□□□ -1.61
SF3B1-208ENST00000470268 CCDC74BQ96LY2 380 aa4.98□□□□□ -1.61
SF3B1-208ENST00000470268 CCDC42Q96M95 316 aa4.98□□□□□ -1.61
SF3B1-208ENST00000470268 HNRNPABQ99729 332 aaKnown RBP4.98□□□□□ -1.61
SF3B1-208ENST00000470268 SMOQ99835 787 aa4.98□□□□□ -1.61
SF3B1-208ENST00000470268 TCF25Q9BQ70 676 aa4.98□□□□□ -1.61
SF3B1-208ENST00000470268 C11orf84Q9BUA3 381 aaPredicted RBP4.98□□□□□ -1.61
SF3B1-208ENST00000470268 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.98□□□□□ -1.61
SF3B1-208ENST00000470268 PACSIN1Q9BY11 444 aa4.98□□□□□ -1.61
SF3B1-208ENST00000470268 KRTAP4-7Q9BYR0 210 aa4.98□□□□□ -1.61
SF3B1-208ENST00000470268 PIF1Q9H611 641 aa4.98□□□□□ -1.61
SF3B1-208ENST00000470268 SLC28A3Q9HAS3 691 aa4.98□□□□□ -1.61
SF3B1-208ENST00000470268 RXFP1Q9HBX9 757 aa4.98□□□□□ -1.61
SF3B1-208ENST00000470268 SSU72Q9NP77 194 aaKnown RBP4.98□□□□□ -1.61
SF3B1-208ENST00000470268 MRPL17Q9NRX2 175 aaKnown RBP4.98□□□□□ -1.61
SF3B1-208ENST00000470268 MSRAQ9UJ68 235 aa4.98□□□□□ -1.61
SF3B1-208ENST00000470268 KIAA1257Q9ULG3 409 aa4.98□□□□□ -1.61
SF3B1-208ENST00000470268 LZTS1Q9Y250 596 aa4.98□□□□□ -1.61
SF3B1-208ENST00000470268 BACE2Q9Y5Z0 518 aa4.98□□□□□ -1.61
SF3B1-208ENST00000470268 IRAK3Q9Y616 596 aa4.98□□□□□ -1.61
SF3B1-208ENST00000470268 BZW2Q9Y6E2 419 aaKnown RBP4.98□□□□□ -1.61
SF3B1-208ENST00000470268 EPN1Q9Y6I3 576 aaPredicted RBP4.98□□□□□ -1.61
SF3B1-208ENST00000470268 REV3LO60673 3130 aa4.98□□□□□ -1.61
SF3B1-208ENST00000470268 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.97□□□□□ -1.61
SF3B1-208ENST00000470268 HMX2A2RU54 273 aa4.97□□□□□ -1.61
SF3B1-208ENST00000470268 MTMR11A4FU01 709 aa4.97□□□□□ -1.61
SF3B1-208ENST00000470268 C2orf71A6NGG8 1288 aa4.97□□□□□ -1.61
SF3B1-208ENST00000470268 OR6C75A6NL08 312 aa4.97□□□□□ -1.61
SF3B1-208ENST00000470268 HHLA1C9JL84 531 aa4.97□□□□□ -1.61
SF3B1-208ENST00000470268 M0QYV0 167 aa4.97□□□□□ -1.61
SF3B1-208ENST00000470268 ARHGAP6O43182 974 aa4.97□□□□□ -1.61
SF3B1-208ENST00000470268 AKR1B10O60218 316 aa4.97□□□□□ -1.61
SF3B1-208ENST00000470268 SOAT2O75908 522 aa4.97□□□□□ -1.61
SF3B1-208ENST00000470268 ABLIM3O94929 683 aa4.97□□□□□ -1.61
SF3B1-208ENST00000470268 LCA5LO95447 670 aa4.97□□□□□ -1.61
SF3B1-208ENST00000470268 SEC24AO95486 1093 aa4.97□□□□□ -1.61
SF3B1-208ENST00000470268 CXCL14O95715 111 aa4.97□□□□□ -1.61
SF3B1-208ENST00000470268 URODP06132 367 aa4.97□□□□□ -1.61
SF3B1-208ENST00000470268 CCDC172P0C7W6 258 aa4.97□□□□□ -1.61
SF3B1-208ENST00000470268 TNNT1P13805 278 aa4.97□□□□□ -1.61
SF3B1-208ENST00000470268 TNFAIP3P21580 790 aa4.97□□□□□ -1.61
SF3B1-208ENST00000470268 CDH5P33151 784 aaPredicted RBP4.97□□□□□ -1.61
SF3B1-208ENST00000470268 GPR15P49685 360 aa4.97□□□□□ -1.61
SF3B1-208ENST00000470268 TSPY1Q01534 308 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms