RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 AAK1Q2M2I8 961 aa5.76□□□□□ -1.49
LSM5-209ENST00000468872 JAKMIP3Q5VZ66 844 aa5.76□□□□□ -1.49
LSM5-209ENST00000468872 DGAT2L7PQ6IED9 249 aa5.76□□□□□ -1.49
LSM5-209ENST00000468872 C16orf89Q6UX73 402 aa5.76□□□□□ -1.49
LSM5-209ENST00000468872 SYT13Q7L8C5 426 aa5.76□□□□□ -1.49
LSM5-209ENST00000468872 WDR53Q7Z5U6 358 aaPredicted RBP5.76□□□□□ -1.49
LSM5-209ENST00000468872 ANKS1BQ7Z6G8 1248 aa5.76□□□□□ -1.49
LSM5-209ENST00000468872 TMTC1Q8IUR5 882 aa5.76□□□□□ -1.49
LSM5-209ENST00000468872 REXO5Q96IC2 774 aaKnown RBP5.76□□□□□ -1.49
LSM5-209ENST00000468872 FSD1LQ9BXM9 530 aa5.76□□□□□ -1.49
LSM5-209ENST00000468872 SLC29A3Q9BZD2 475 aa5.76□□□□□ -1.49
LSM5-209ENST00000468872 CHODLQ9H9P2 273 aa5.76□□□□□ -1.49
LSM5-209ENST00000468872 LIN7CQ9NUP9 197 aaKnown RBP5.76□□□□□ -1.49
LSM5-209ENST00000468872 MGAT4CQ9UBM8 478 aa5.76□□□□□ -1.49
LSM5-209ENST00000468872 CRYL1Q9Y2S2 319 aa5.76□□□□□ -1.49
LSM5-209ENST00000468872 UBE2J1Q9Y385 318 aaPredicted RBP5.76□□□□□ -1.49
LSM5-209ENST00000468872 LINC01548A6NM66 108 aa5.75□□□□□ -1.49
LSM5-209ENST00000468872 TMPRSS11DO60235 418 aa5.75□□□□□ -1.49
LSM5-209ENST00000468872 HNRNPCP07910 306 aaKnown RBP eCLIP5.75□□□□□ -1.49
LSM5-209ENST00000468872 PEPDP12955 493 aa5.75□□□□□ -1.49
LSM5-209ENST00000468872 FPR3P25089 353 aa5.75□□□□□ -1.49
LSM5-209ENST00000468872 RALBP1Q15311 655 aa5.75□□□□□ -1.49
LSM5-209ENST00000468872 FAM187BQ17R55 369 aa5.75□□□□□ -1.49
LSM5-209ENST00000468872 KIAA1614Q5VZ46 1190 aa5.75□□□□□ -1.49
LSM5-209ENST00000468872 SUMO4Q6EEV6 95 aa5.75□□□□□ -1.49
LSM5-209ENST00000468872 PNPLA1Q8N8W4 532 aa5.75□□□□□ -1.49
LSM5-209ENST00000468872 SEMA6DQ8NFY4 1073 aa5.75□□□□□ -1.49
LSM5-209ENST00000468872 CEP70Q8NHQ1 597 aa5.75□□□□□ -1.49
LSM5-209ENST00000468872 SMG7Q92540 1137 aaKnown RBP5.75□□□□□ -1.49
LSM5-209ENST00000468872 THAP7Q9BT49 309 aaPredicted RBP5.75□□□□□ -1.49
LSM5-209ENST00000468872 RASSF1Q9NS23 344 aa5.75□□□□□ -1.49
LSM5-209ENST00000468872 IFT80Q9P2H3 777 aaPredicted RBP5.75□□□□□ -1.49
LSM5-209ENST00000468872 SERGEFQ9UGK8 458 aa5.75□□□□□ -1.49
LSM5-209ENST00000468872 PNMA2Q9UL42 364 aa5.75□□□□□ -1.49
LSM5-209ENST00000468872 ADAMTS5Q9UNA0 930 aa5.75□□□□□ -1.49
LSM5-209ENST00000468872 TARM1B6A8C7 271 aa5.74□□□□□ -1.49
LSM5-209ENST00000468872 PRAMEF2O60811 474 aa5.74□□□□□ -1.49
LSM5-209ENST00000468872 HEXIM1O94992 359 aaKnown RBP5.74□□□□□ -1.49
LSM5-209ENST00000468872 PDE8BO95263 885 aa5.74□□□□□ -1.49
LSM5-209ENST00000468872 MBPP02686 304 aaPredicted RBP5.74□□□□□ -1.49
LSM5-209ENST00000468872 TFRCP02786 760 aaKnown RBP5.74□□□□□ -1.49
LSM5-209ENST00000468872 TMIGD3P0DMS9 266 aaPredicted RBP5.74□□□□□ -1.49
LSM5-209ENST00000468872 MMP8P22894 467 aa5.74□□□□□ -1.49
LSM5-209ENST00000468872 CCR5P51681 352 aa5.74□□□□□ -1.49
LSM5-209ENST00000468872 RPL15P61313 204 aaKnown RBP5.74□□□□□ -1.49
LSM5-209ENST00000468872 LMAN2Q12907 356 aa5.74□□□□□ -1.49
LSM5-209ENST00000468872 PDCLQ13371 301 aa5.74□□□□□ -1.49
LSM5-209ENST00000468872 SLC12A1Q13621 1099 aa5.74□□□□□ -1.49
LSM5-209ENST00000468872 ZNF569Q5MCW4 686 aa5.74□□□□□ -1.49
LSM5-209ENST00000468872 L1TD1Q5T7N2 865 aaKnown RBP5.74□□□□□ -1.49
LSM5-209ENST00000468872 ANKRD40Q6AI12 368 aa5.74□□□□□ -1.49
LSM5-209ENST00000468872 ACSM6Q6P461 480 aa5.74□□□□□ -1.49
LSM5-209ENST00000468872 ANKRD16Q6P6B7 361 aa5.74□□□□□ -1.49
LSM5-209ENST00000468872 C1QL2Q7Z5L3 287 aa5.74□□□□□ -1.49
LSM5-209ENST00000468872 TMEM57Q8N5G2 664 aa5.74□□□□□ -1.49
LSM5-209ENST00000468872 TEX19Q8NA77 164 aa5.74□□□□□ -1.49
LSM5-209ENST00000468872 ABHD11Q8NFV4 315 aa5.74□□□□□ -1.49
LSM5-209ENST00000468872 MAELQ96JY0 434 aaKnown RBP5.74□□□□□ -1.49
LSM5-209ENST00000468872 PPM1MQ96MI6 270 aa5.74□□□□□ -1.49
LSM5-209ENST00000468872 TWNKQ96RR1 684 aa5.74□□□□□ -1.49
LSM5-209ENST00000468872 C1QTNF7Q9BXJ2 289 aa5.74□□□□□ -1.49
LSM5-209ENST00000468872 FLRT1Q9NZU1 646 aa5.74□□□□□ -1.49
LSM5-209ENST00000468872 RAB21Q9UL25 225 aa5.74□□□□□ -1.49
LSM5-209ENST00000468872 TRPC5Q9UL62 973 aaPredicted RBP5.74□□□□□ -1.49
LSM5-209ENST00000468872 DERAQ9Y315 318 aa5.74□□□□□ -1.49
LSM5-209ENST00000468872 DISP3Q9P2K9 1392 aa5.74□□□□□ -1.49
LSM5-209ENST00000468872 KAT6AQ92794 2004 aa5.74□□□□□ -1.49
LSM5-209ENST00000468872 QSOX1O00391 747 aa5.73□□□□□ -1.49
LSM5-209ENST00000468872 NKX2-8O15522 239 aa5.73□□□□□ -1.49
LSM5-209ENST00000468872 NPSP0C0P6 89 aa5.73□□□□□ -1.49
LSM5-209ENST00000468872 MYCLP12524 364 aaPredicted RBP5.73□□□□□ -1.49
LSM5-209ENST00000468872 NDUFB7P17568 137 aa5.73□□□□□ -1.49
LSM5-209ENST00000468872 IGHMBP2P38935 993 aaKnown RBP5.73□□□□□ -1.49
LSM5-209ENST00000468872 ZNF81P51508 661 aa5.73□□□□□ -1.49
LSM5-209ENST00000468872 RBM5P52756 815 aaKnown RBP eCLIP5.73□□□□□ -1.49
LSM5-209ENST00000468872 EEFSECP57772 596 aaKnown RBP5.73□□□□□ -1.49
LSM5-209ENST00000468872 RBM6P78332 1123 aaKnown RBP5.73□□□□□ -1.49
LSM5-209ENST00000468872 GPC5P78333 572 aa5.73□□□□□ -1.49
LSM5-209ENST00000468872 RAE1P78406 368 aaKnown RBP5.73□□□□□ -1.49
LSM5-209ENST00000468872 TXNL4AP83876 142 aaKnown RBP5.73□□□□□ -1.49
LSM5-209ENST00000468872 RNASELQ05823 741 aaKnown RBP5.73□□□□□ -1.49
LSM5-209ENST00000468872 SLC10A2Q12908 348 aaPredicted RBP5.73□□□□□ -1.49
LSM5-209ENST00000468872 SLC4A8Q2Y0W8 1093 aa5.73□□□□□ -1.49
LSM5-209ENST00000468872 TBC1D25Q3MII6 688 aa5.73□□□□□ -1.49
LSM5-209ENST00000468872 TMEM119Q4V9L6 283 aa5.73□□□□□ -1.49
LSM5-209ENST00000468872 RNASE12Q5GAN4 147 aaKnown RBP5.73□□□□□ -1.49
LSM5-209ENST00000468872 INTS11Q5TA45 600 aaKnown RBP5.73□□□□□ -1.49
LSM5-209ENST00000468872 MTHFD1LQ6UB35 978 aa5.73□□□□□ -1.49
LSM5-209ENST00000468872 ZNF782Q6ZMW2 699 aaPredicted RBP5.73□□□□□ -1.49
LSM5-209ENST00000468872 SFTPA1Q8IWL2 248 aa5.73□□□□□ -1.49
LSM5-209ENST00000468872 ESX1Q8N693 406 aa5.73□□□□□ -1.49
LSM5-209ENST00000468872 NAXEQ8NCW5 288 aa5.73□□□□□ -1.49
LSM5-209ENST00000468872 NGDNQ8NEJ9 315 aaKnown RBP5.73□□□□□ -1.49
LSM5-209ENST00000468872 EDC3Q96F86 508 aaKnown RBP5.73□□□□□ -1.49
LSM5-209ENST00000468872 FAR2Q96K12 515 aa5.73□□□□□ -1.49
LSM5-209ENST00000468872 ZNF778Q96MU6 729 aa5.73□□□□□ -1.49
LSM5-209ENST00000468872 WASH6PQ9NQA3 447 aa5.73□□□□□ -1.49
LSM5-209ENST00000468872 SNX15Q9NRS6 342 aa5.73□□□□□ -1.49
LSM5-209ENST00000468872 RCE1Q9Y256 329 aa5.73□□□□□ -1.49
LSM5-209ENST00000468872 WDR91A4D1P6 747 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms