RNA–Protein interactions for RNA: ENST00000465556.1

TMCO3-205, Transcript of transmembrane and coiled-coil domains 3, humanhuman

TSL 3

Gene TMCO3, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-205ENST00000465556 WFDC5Q8TCV5 224 aa12.48□□□□□ -0.41
TMCO3-205ENST00000465556 UCMAQ8WVF2 138 aa12.48□□□□□ -0.41
TMCO3-205ENST00000465556 RMDN1Q96DB5 314 aa12.48□□□□□ -0.41
TMCO3-205ENST00000465556 TMA16Q96EY4 203 aaKnown RBP12.48□□□□□ -0.41
TMCO3-205ENST00000465556 SLC2A13Q96QE2 648 aa12.48□□□□□ -0.41
TMCO3-205ENST00000465556 DDX50Q9BQ39 737 aaKnown RBP12.48□□□□□ -0.41
TMCO3-205ENST00000465556 STK33Q9BYT3 514 aa12.48□□□□□ -0.41
TMCO3-205ENST00000465556 IRX2Q9BZI1 471 aaPredicted RBP12.48□□□□□ -0.41
TMCO3-205ENST00000465556 CIPCQ9C0C6 399 aa12.48□□□□□ -0.41
TMCO3-205ENST00000465556 NUCKS1Q9H1E3 243 aaKnown RBP12.48□□□□□ -0.41
TMCO3-205ENST00000465556 HSD3B7Q9H2F3 369 aa12.48□□□□□ -0.41
TMCO3-205ENST00000465556 SYNCQ9H7C4 482 aa12.48□□□□□ -0.41
TMCO3-205ENST00000465556 FAM204AQ9H8W3 233 aa12.48□□□□□ -0.41
TMCO3-205ENST00000465556 FAM207AQ9NSI2 230 aaPredicted RBP12.48□□□□□ -0.41
TMCO3-205ENST00000465556 SEMA4GQ9NTN9 838 aa12.48□□□□□ -0.41
TMCO3-205ENST00000465556 CALCOCO1Q9P1Z2 691 aa12.48□□□□□ -0.41
TMCO3-205ENST00000465556 LIMA1Q9UHB6 759 aaKnown RBP12.48□□□□□ -0.41
TMCO3-205ENST00000465556 SIK3Q9Y2K2 1263 aa12.48□□□□□ -0.41
TMCO3-205ENST00000465556 RAD54BQ9Y620 910 aa12.48□□□□□ -0.41
TMCO3-205ENST00000465556 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.48□□□□□ -0.41
TMCO3-205ENST00000465556 STON1Q9Y6Q2 735 aa12.48□□□□□ -0.41
TMCO3-205ENST00000465556 ASCC3Q8N3C0 2202 aaKnown RBP12.47□□□□□ -0.41
TMCO3-205ENST00000465556 GOLGA6L7A0A1B0GV03 622 aa12.47□□□□□ -0.41
TMCO3-205ENST00000465556 TYW5A2RUC4 315 aaKnown RBP12.47□□□□□ -0.41
TMCO3-205ENST00000465556 EPHB6O15197 1021 aa12.47□□□□□ -0.41
TMCO3-205ENST00000465556 TBL1XO60907 577 aa12.47□□□□□ -0.41
TMCO3-205ENST00000465556 GRAP2O75791 330 aa12.47□□□□□ -0.41
TMCO3-205ENST00000465556 RHOBTB1O94844 696 aa12.47□□□□□ -0.41
TMCO3-205ENST00000465556 NDUFV2P19404 249 aa12.47□□□□□ -0.41
TMCO3-205ENST00000465556 MPLP40238 635 aa12.47□□□□□ -0.41
TMCO3-205ENST00000465556 SNX16P57768 344 aa12.47□□□□□ -0.41
TMCO3-205ENST00000465556 ENPP2Q13822 863 aa12.47□□□□□ -0.41
TMCO3-205ENST00000465556 SYCP1Q15431 976 aa12.47□□□□□ -0.41
TMCO3-205ENST00000465556 MAP7D1Q3KQU3 841 aa12.47□□□□□ -0.41
TMCO3-205ENST00000465556 ANO6Q4KMQ2 910 aa12.47□□□□□ -0.41
TMCO3-205ENST00000465556 DCAF6Q58WW2 860 aa12.47□□□□□ -0.41
TMCO3-205ENST00000465556 ZC3H12AQ5D1E8 599 aaKnown RBP12.47□□□□□ -0.41
TMCO3-205ENST00000465556 EFHC1Q5JVL4 640 aa12.47□□□□□ -0.41
TMCO3-205ENST00000465556 MPP7Q5T2T1 576 aa12.47□□□□□ -0.41
TMCO3-205ENST00000465556 TAF3Q5VWG9 929 aa12.47□□□□□ -0.41
TMCO3-205ENST00000465556 TMEM215Q68D42 235 aa12.47□□□□□ -0.41
TMCO3-205ENST00000465556 OR6B2Q6IFH4 312 aa12.47□□□□□ -0.41
TMCO3-205ENST00000465556 KIAA1211LQ6NV74 962 aa12.47□□□□□ -0.41
TMCO3-205ENST00000465556 CAVIN1Q6NZI2 390 aaKnown RBP12.47□□□□□ -0.41
TMCO3-205ENST00000465556 SLC26A9Q7LBE3 791 aa12.47□□□□□ -0.41
TMCO3-205ENST00000465556 NOP9Q86U38 636 aaKnown RBP12.47□□□□□ -0.41
TMCO3-205ENST00000465556 DEFB106AQ8N104 65 aa12.47□□□□□ -0.41
TMCO3-205ENST00000465556 PGBD3Q8N328 593 aa12.47□□□□□ -0.41
TMCO3-205ENST00000465556 WFIKKN2Q8TEU8 576 aa12.47□□□□□ -0.41
TMCO3-205ENST00000465556 RLN3Q8WXF3 142 aa12.47□□□□□ -0.41
TMCO3-205ENST00000465556 DDX1Q92499 740 aaKnown RBP12.47□□□□□ -0.41
TMCO3-205ENST00000465556 ERLEC1Q96DZ1 483 aa12.47□□□□□ -0.41
TMCO3-205ENST00000465556 ARRDC1-AS1Q9H2J1 176 aa12.47□□□□□ -0.41
TMCO3-205ENST00000465556 PDCL3Q9H2J4 239 aa12.47□□□□□ -0.41
TMCO3-205ENST00000465556 ABCB8Q9NUT2 735 aa12.47□□□□□ -0.41
TMCO3-205ENST00000465556 ELOVL2Q9NXB9 296 aa12.47□□□□□ -0.41
TMCO3-205ENST00000465556 THAP10Q9P2Z0 257 aaPredicted RBP12.47□□□□□ -0.41
TMCO3-205ENST00000465556 XPO7Q9UIA9 1087 aaKnown RBP12.47□□□□□ -0.41
TMCO3-205ENST00000465556 GGA2Q9UJY4 613 aa12.47□□□□□ -0.41
TMCO3-205ENST00000465556 DAAM1Q9Y4D1 1078 aa12.47□□□□□ -0.41
TMCO3-205ENST00000465556 PCDHGA5Q9Y5G8 931 aa12.47□□□□□ -0.41
TMCO3-205ENST00000465556 NCOR2Q9Y618 2525 aa12.47□□□□□ -0.41
TMCO3-205ENST00000465556 CHD5Q8TDI0 1954 aa12.47□□□□□ -0.41
TMCO3-205ENST00000465556 PRR5-ARHGAP8B1AHC4 643 aa12.46□□□□□ -0.41
TMCO3-205ENST00000465556 WASH3PC4AMC7 463 aa12.46□□□□□ -0.41
TMCO3-205ENST00000465556 GFPT2O94808 682 aa12.46□□□□□ -0.41
TMCO3-205ENST00000465556 LSM8O95777 96 aaKnown RBP12.46□□□□□ -0.41
TMCO3-205ENST00000465556 MMEP08473 750 aa12.46□□□□□ -0.41
TMCO3-205ENST00000465556 PABPC1P11940 636 aaKnown RBP12.46□□□□□ -0.41
TMCO3-205ENST00000465556 PRKCHP24723 683 aa12.46□□□□□ -0.41
TMCO3-205ENST00000465556 JAM2P57087 298 aa12.46□□□□□ -0.41
TMCO3-205ENST00000465556 POLR2FP61218 127 aaKnown RBP12.46□□□□□ -0.41
TMCO3-205ENST00000465556 RPS24P62847 133 aaKnown RBP12.46□□□□□ -0.41
TMCO3-205ENST00000465556 ARHGAP8P85298 464 aa12.46□□□□□ -0.41
TMCO3-205ENST00000465556 CDK17Q00537 523 aa12.46□□□□□ -0.41
TMCO3-205ENST00000465556 SLC6A3Q01959 620 aa12.46□□□□□ -0.41
TMCO3-205ENST00000465556 EIF4EBP2Q13542 120 aaPredicted RBP12.46□□□□□ -0.41
TMCO3-205ENST00000465556 ZNF234Q14588 700 aa12.46□□□□□ -0.41
TMCO3-205ENST00000465556 STARD3Q14849 445 aa12.46□□□□□ -0.41
TMCO3-205ENST00000465556 E2F5Q15329 346 aa12.46□□□□□ -0.41
TMCO3-205ENST00000465556 CCDC6Q16204 474 aa12.46□□□□□ -0.41
TMCO3-205ENST00000465556 MS4A13Q5J8X5 152 aa12.46□□□□□ -0.41
TMCO3-205ENST00000465556 SERPINA13PQ6UXR4 307 aa12.46□□□□□ -0.41
TMCO3-205ENST00000465556 CHST9Q7L1S5 443 aa12.46□□□□□ -0.41
TMCO3-205ENST00000465556 APTXQ7Z2E3 356 aaKnown RBP12.46□□□□□ -0.41
TMCO3-205ENST00000465556 CHSY1Q86X52 802 aa12.46□□□□□ -0.41
TMCO3-205ENST00000465556 ZDHHC17Q8IUH5 632 aa12.46□□□□□ -0.41
TMCO3-205ENST00000465556 MFN1Q8IWA4 741 aa12.46□□□□□ -0.41
TMCO3-205ENST00000465556 AHI1Q8N157 1196 aa12.46□□□□□ -0.41
TMCO3-205ENST00000465556 ZNF557Q8N988 423 aaPredicted RBP12.46□□□□□ -0.41
TMCO3-205ENST00000465556 ZNF397Q8NF99 534 aaPredicted RBP12.46□□□□□ -0.41
TMCO3-205ENST00000465556 SLC20A1Q8WUM9 679 aa12.46□□□□□ -0.41
TMCO3-205ENST00000465556 SORCS1Q8WY21 1168 aa12.46□□□□□ -0.41
TMCO3-205ENST00000465556 MYEOVQ96EZ4 313 aa12.46□□□□□ -0.41
TMCO3-205ENST00000465556 BTN2A3PQ96KV6 586 aa12.46□□□□□ -0.41
TMCO3-205ENST00000465556 NAT10Q9H0A0 1025 aaKnown RBP12.46□□□□□ -0.41
TMCO3-205ENST00000465556 NLRC4Q9NPP4 1024 aa12.46□□□□□ -0.41
TMCO3-205ENST00000465556 DDIT4Q9NX09 232 aa12.46□□□□□ -0.41
TMCO3-205ENST00000465556 NOCTQ9UK39 431 aaKnown RBP12.46□□□□□ -0.41
TMCO3-205ENST00000465556 PCDH15Q96QU1 1955 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms