RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 TBCBQ99426 244 aa18.36■□□□□ 0.53
VPS52-214ENST00000463486 RAB6CQ9H0N0 254 aa18.36■□□□□ 0.53
VPS52-214ENST00000463486 NUCKS1Q9H1E3 243 aaKnown RBP18.36■□□□□ 0.53
VPS52-214ENST00000463486 LUC7L2Q9Y383 392 aaKnown RBP18.36■□□□□ 0.53
VPS52-214ENST00000463486 STARD13Q9Y3M8 1113 aa18.36■□□□□ 0.53
VPS52-214ENST00000463486 C2CD4BA6NLJ0 364 aa18.35■□□□□ 0.53
VPS52-214ENST00000463486 CBFA2T2O43439 604 aa18.35■□□□□ 0.53
VPS52-214ENST00000463486 APODP05090 189 aa18.35■□□□□ 0.53
VPS52-214ENST00000463486 CALB1P05937 261 aa18.35■□□□□ 0.53
VPS52-214ENST00000463486 PLEKP08567 350 aaPredicted RBP18.35■□□□□ 0.53
VPS52-214ENST00000463486 GZMAP12544 262 aa18.35■□□□□ 0.53
VPS52-214ENST00000463486 CCR1P32246 355 aa18.35■□□□□ 0.53
VPS52-214ENST00000463486 GBP1P32455 592 aa18.35■□□□□ 0.53
VPS52-214ENST00000463486 RFC1P35251 1148 aaPredicted RBP18.35■□□□□ 0.53
VPS52-214ENST00000463486 DGKGP49619 791 aa18.35■□□□□ 0.53
VPS52-214ENST00000463486 CCR3P51677 355 aa18.35■□□□□ 0.53
VPS52-214ENST00000463486 ATXN1P54253 815 aaKnown RBP18.35■□□□□ 0.53
VPS52-214ENST00000463486 CSTF1Q05048 431 aaKnown RBP18.35■□□□□ 0.53
VPS52-214ENST00000463486 MS4A13Q5J8X5 152 aa18.35■□□□□ 0.53
VPS52-214ENST00000463486 MPP7Q5T2T1 576 aa18.35■□□□□ 0.53
VPS52-214ENST00000463486 SPECC1LQ69YQ0 1117 aa18.35■□□□□ 0.53
VPS52-214ENST00000463486 GRAMD4Q6IC98 578 aa18.35■□□□□ 0.53
VPS52-214ENST00000463486 DNAAF5Q86Y56 855 aa18.35■□□□□ 0.53
VPS52-214ENST00000463486 C3orf20Q8ND61 904 aa18.35■□□□□ 0.53
VPS52-214ENST00000463486 RPLP0P6Q8NHW5 317 aa18.35■□□□□ 0.53
VPS52-214ENST00000463486 DDI1Q8WTU0 396 aa18.35■□□□□ 0.53
VPS52-214ENST00000463486 CENPIQ92674 756 aaPredicted RBP18.35■□□□□ 0.53
VPS52-214ENST00000463486 LMLNQ96KR4 655 aa18.35■□□□□ 0.53
VPS52-214ENST00000463486 CFAP57Q96MR6 1250 aa18.35■□□□□ 0.53
VPS52-214ENST00000463486 SLC2A11Q9BYW1 496 aa18.35■□□□□ 0.53
VPS52-214ENST00000463486 METTL5Q9NRN9 209 aaKnown RBP18.35■□□□□ 0.53
VPS52-214ENST00000463486 SEPT11Q9NVA2 429 aaKnown RBP18.35■□□□□ 0.53
VPS52-214ENST00000463486 ARHGEF38Q9NXL2 777 aa18.35■□□□□ 0.53
VPS52-214ENST00000463486 MYO18AQ92614 2054 aaKnown RBP18.34■□□□□ 0.53
VPS52-214ENST00000463486 SYNJ2BP-COX16A0A087WUM0 186 aa18.34■□□□□ 0.53
VPS52-214ENST00000463486 TBC1D3BA6NDS4 549 aa18.34■□□□□ 0.53
VPS52-214ENST00000463486 SIGLEC16A6NMB1 481 aa18.34■□□□□ 0.53
VPS52-214ENST00000463486 ADCY5O95622 1261 aa18.34■□□□□ 0.53
VPS52-214ENST00000463486 MOCS2O96007 188 aaPredicted RBP18.34■□□□□ 0.53
VPS52-214ENST00000463486 APOEP02649 317 aa18.34■□□□□ 0.53
VPS52-214ENST00000463486 TPM3P06753 285 aa18.34■□□□□ 0.53
VPS52-214ENST00000463486 SLC2A3P11169 496 aa18.34■□□□□ 0.53
VPS52-214ENST00000463486 RRM1P23921 792 aa18.34■□□□□ 0.53
VPS52-214ENST00000463486 HOXA6P31267 233 aa18.34■□□□□ 0.53
VPS52-214ENST00000463486 SEC13P55735 322 aa18.34■□□□□ 0.53
VPS52-214ENST00000463486 MRPS21P82921 87 aaKnown RBP18.34■□□□□ 0.53
VPS52-214ENST00000463486 NME3Q13232 169 aa18.34■□□□□ 0.53
VPS52-214ENST00000463486 GEN1Q17RS7 908 aa18.34■□□□□ 0.53
VPS52-214ENST00000463486 CCDC14Q49A88 953 aa18.34■□□□□ 0.53
VPS52-214ENST00000463486 C2orf27AQ580R0 203 aa18.34■□□□□ 0.53
VPS52-214ENST00000463486 SH3PXD2AQ5TCZ1 1133 aa18.34■□□□□ 0.53
VPS52-214ENST00000463486 TMEM215Q68D42 235 aa18.34■□□□□ 0.53
VPS52-214ENST00000463486 WDR59Q6PJI9 974 aa18.34■□□□□ 0.53
VPS52-214ENST00000463486 SYT13Q7L8C5 426 aa18.34■□□□□ 0.53
VPS52-214ENST00000463486 KIAA0907Q7Z7F0 614 aaPredicted RBP18.34■□□□□ 0.53
VPS52-214ENST00000463486 IL17RCQ8NAC3 791 aa18.34■□□□□ 0.53
VPS52-214ENST00000463486 RXFP2Q8WXD0 754 aa18.34■□□□□ 0.53
VPS52-214ENST00000463486 VCPIP1Q96JH7 1222 aa18.34■□□□□ 0.53
VPS52-214ENST00000463486 PHOX2BQ99453 314 aa18.34■□□□□ 0.53
VPS52-214ENST00000463486 COX16Q9P0S2 106 aa18.34■□□□□ 0.53
VPS52-214ENST00000463486 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.34■□□□□ 0.533e-7■■■□□ 19.2
VPS52-214ENST00000463486 GPR179Q6PRD1 2367 aa18.34■□□□□ 0.53
VPS52-214ENST00000463486 FRYLO94915 3013 aa18.33■□□□□ 0.53
VPS52-214ENST00000463486 ADAM23O75077 832 aa18.33■□□□□ 0.52
VPS52-214ENST00000463486 ATG13O75143 517 aa18.33■□□□□ 0.52
VPS52-214ENST00000463486 CYBBP04839 570 aa18.33■□□□□ 0.52
VPS52-214ENST00000463486 SERPING1P05155 500 aa18.33■□□□□ 0.52
VPS52-214ENST00000463486 KRT3P12035 628 aa18.33■□□□□ 0.52
VPS52-214ENST00000463486 HNRNPLP14866 589 aaKnown RBP eCLIP18.33■□□□□ 0.52
VPS52-214ENST00000463486 TACR2P21452 398 aa18.33■□□□□ 0.52
VPS52-214ENST00000463486 HLA-FP30511 346 aa18.33■□□□□ 0.52
VPS52-214ENST00000463486 PTPN9P43378 593 aa18.33■□□□□ 0.52
VPS52-214ENST00000463486 SULT1E1P49888 294 aa18.33■□□□□ 0.52
VPS52-214ENST00000463486 RPS24P62847 133 aaKnown RBP18.33■□□□□ 0.52
VPS52-214ENST00000463486 DMWDQ09019 674 aa18.33■□□□□ 0.52
VPS52-214ENST00000463486 TBX2Q13207 712 aaPredicted RBP18.33■□□□□ 0.52
VPS52-214ENST00000463486 C10orf76Q5T2E6 689 aa18.33■□□□□ 0.52
VPS52-214ENST00000463486 ZBTB44Q8NCP5 570 aa18.33■□□□□ 0.52
VPS52-214ENST00000463486 WFDC5Q8TCV5 224 aa18.33■□□□□ 0.52
VPS52-214ENST00000463486 KCNV2Q8TDN2 545 aa18.33■□□□□ 0.52
VPS52-214ENST00000463486 DNAJC7Q99615 494 aa18.33■□□□□ 0.52
VPS52-214ENST00000463486 ISCUQ9H1K1 167 aa18.33■□□□□ 0.52
VPS52-214ENST00000463486 ZDHHC4Q9NPG8 344 aa18.33■□□□□ 0.52
VPS52-214ENST00000463486 FAM86C1Q9NVL1 165 aa18.33■□□□□ 0.52
VPS52-214ENST00000463486 ARHGAP20Q9P2F6 1191 aa18.33■□□□□ 0.52
VPS52-214ENST00000463486 STAP1Q9ULZ2 295 aa18.33■□□□□ 0.52
VPS52-214ENST00000463486 NENFQ9UMX5 172 aa18.33■□□□□ 0.52
VPS52-214ENST00000463486 BZW2Q9Y6E2 419 aaKnown RBP18.33■□□□□ 0.52
VPS52-214ENST00000463486 FANCMQ8IYD8 2048 aa18.32■□□□□ 0.52
VPS52-214ENST00000463486 TMCO5BA8MYB1 307 aa18.32■□□□□ 0.52
VPS52-214ENST00000463486 TBL1XO60907 577 aa18.32■□□□□ 0.52
VPS52-214ENST00000463486 PAGE1O75459 146 aa18.32■□□□□ 0.52
VPS52-214ENST00000463486 F9P00740 461 aa18.32■□□□□ 0.52
VPS52-214ENST00000463486 FTLP02792 175 aaPredicted RBP18.32■□□□□ 0.52
VPS52-214ENST00000463486 PDGFRAP16234 1089 aa18.32■□□□□ 0.52
VPS52-214ENST00000463486 NBL1P41271 181 aa18.32■□□□□ 0.52
VPS52-214ENST00000463486 RPL7AP62424 266 aaKnown RBP18.32■□□□□ 0.52
VPS52-214ENST00000463486 C15orf59Q2T9L4 293 aaPredicted RBP18.32■□□□□ 0.52
VPS52-214ENST00000463486 PREPLQ4J6C6 727 aaPredicted RBP18.32■□□□□ 0.52
VPS52-214ENST00000463486 RAP1GAP2Q684P5 730 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms