RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 TJP1Q07157 1748 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 ERICH5Q6P6B1 374 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 CCNYL1Q8N7R7 359 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 CABLES1Q8TDN4 633 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 NLNQ9BYT8 704 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 DCTN4Q9UJW0 460 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 A0A087X1B8 175 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 PNMA6EA0A0J9YXQ4 647 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 A0A1W2PQ67 120 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 CYBBP04839 570 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 IL1RL1Q01638 556 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 DPY19L1Q2PZI1 675 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 PI16Q6UXB8 463 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 KRT77Q7Z794 578 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 C16orf71Q8IYS4 520 aaPredicted RBP5.33□□□□□ -1.56
CSMD3-204ENST00000455883 HEXIM2Q96MH2 286 aaKnown RBP5.33□□□□□ -1.56
CSMD3-204ENST00000455883 NPHS2Q9NP85 383 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 TMEM45AQ9NWC5 275 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 RCOR3Q9P2K3 495 aaPredicted RBP5.33□□□□□ -1.56
CSMD3-204ENST00000455883 HEG1Q9ULI3 1381 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 FAM208BQ5VWN6 2430 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 BCLAF3A2AJT9 711 aaKnown RBP5.33□□□□□ -1.56
CSMD3-204ENST00000455883 RAD51BO15315 384 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 CSH1P0DML2 217 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 CSH2P0DML3 217 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 SDC2P34741 201 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 ETV6P41212 452 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 PTGER2P43116 358 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 TNK2Q07912 1038 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 PLA2G4FQ68DD2 849 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 SNRNP48Q6IEG0 339 aaKnown RBP5.33□□□□□ -1.56
CSMD3-204ENST00000455883 NSMFQ6X4W1 530 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 CPNE9Q8IYJ1 553 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 GOLM1Q8NBJ4 401 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 ZFP28Q8NHY6 868 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 EAF2Q96CJ1 260 aaPredicted RBP5.33□□□□□ -1.56
CSMD3-204ENST00000455883 ASIC4Q96FT7 647 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 CCDC85AQ96PX6 553 aaPredicted RBP5.33□□□□□ -1.56
CSMD3-204ENST00000455883 SLITRK1Q96PX8 696 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 HERC2P3Q9BVR0 1158 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 BLZF1Q9H2G9 400 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 NMRAL1Q9HBL8 299 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 CYP39A1Q9NYL5 469 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 MEMO1Q9Y316 297 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 STX16-NPEPL1H3BU86 382 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 CHADO15335 359 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 SORBS3O60504 671 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 EPN2O95208 641 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 FTLP02792 175 aaPredicted RBP5.33□□□□□ -1.56
CSMD3-204ENST00000455883 WEE2P0C1S8 567 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 SYT16Q17RD7 645 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 SHROOM1Q2M3G4 852 aaPredicted RBP5.33□□□□□ -1.56
CSMD3-204ENST00000455883 MACC1Q6ZN28 852 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 ADSSL1Q8N142 457 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 ADCY4Q8NFM4 1077 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 PJA1Q8NG27 643 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 OR6P1Q8NGX9 317 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 RMDN3Q96TC7 470 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 NT5C1AQ9BXI3 368 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 CAB39LQ9H9S4 337 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 PTTG3PQ9NZH4 202 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 SLC25A13Q9UJS0 675 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 TMX2Q9Y320 296 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 POLR2AP24928 1970 aaKnown RBP5.33□□□□□ -1.56
CSMD3-204ENST00000455883 FRMPD2Q68DX3 1309 aaPredicted RBP5.33□□□□□ -1.56
CSMD3-204ENST00000455883 ZNF701M0R085 212 aaPredicted RBP5.33□□□□□ -1.56
CSMD3-204ENST00000455883 FGF10O15520 208 aaPredicted RBP5.33□□□□□ -1.56
CSMD3-204ENST00000455883 CYP2D6P10635 497 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 CYP19A1P11511 503 aaPredicted RBP5.33□□□□□ -1.56
CSMD3-204ENST00000455883 POLR2LP62875 67 aaKnown RBP5.33□□□□□ -1.56
CSMD3-204ENST00000455883 TSHZ3Q63HK5 1081 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 PLET1Q6UQ28 207 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 PROSER1Q86XN7 944 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 ZCCHC9Q8N567 271 aaKnown RBP5.33□□□□□ -1.56
CSMD3-204ENST00000455883 PIWIL2Q8TC59 973 aaKnown RBP5.33□□□□□ -1.56
CSMD3-204ENST00000455883 DNAJB3Q8WWF6 145 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 COX4I2Q96KJ9 171 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 GORASP1Q9BQQ3 440 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 NGRNQ9NPE2 291 aaKnown RBP5.33□□□□□ -1.56
CSMD3-204ENST00000455883 C14orf105Q9NVL8 296 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 SLC22A1O15245 554 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 CNPY1Q3B7I2 92 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 GRTP1Q5TC63 336 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 DPY19L2Q6NUT2 758 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 ESRP1Q6NXG1 681 aaKnown RBP5.33□□□□□ -1.56
CSMD3-204ENST00000455883 PAGE2Q7Z2X7 111 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 GAS2L3Q86XJ1 694 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 TSPAN14Q8NG11 270 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 SH3KBP1Q96B97 665 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 MED11Q9P086 117 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 TRPS1Q9UHF7 1281 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 MAGEL2Q9UJ55 1249 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 C2CD2LO14523 706 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 CAND2O75155 1236 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 ASS1P00966 412 aaKnown RBP5.33□□□□□ -1.56
CSMD3-204ENST00000455883 COL6A2P12110 1019 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 ZNF23P17027 643 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 RRM1P23921 792 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 EIF3EP60228 445 aaKnown RBP5.33□□□□□ -1.56
CSMD3-204ENST00000455883 TBL3Q12788 808 aaKnown RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms