RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 USTQ9Y2C2 406 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 TBX22Q9Y458 520 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 ASB4Q9Y574 426 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 PCDHB4Q9Y5E5 795 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 SNX8Q9Y5X2 465 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 CCDC195A0A1B0GUA6 201 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 KRT87PA6NCN2 255 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 TRIM49BA6NDI0 452 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 TUBAL3A6NHL2 446 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 ZNF879B4DU55 563 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 TRIM49D1C9J1S8 452 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 EYA2O00167 538 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 HAT1O14929 419 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 KPNA5O15131 536 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 SPTLC1O15269 473 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 ITM2AO43736 263 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 AP1G1O43747 822 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 UGT1A9O60656 530 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 LRRN2O75325 713 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 SNAP29O95721 258 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 IFNB1P01574 187 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 CYP21A2P08686 494 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 TRAPPC2P0DI81 140 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 TRAPPC2BP0DI82 140 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 PEPDP12955 493 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 COX4I1P13073 169 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 PRG2P13727 222 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 UGT1A6P19224 532 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 UGT1A1P22309 533 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 UGT1A4P22310 534 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 GLDCP23378 1020 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 CD40LGP29965 261 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 CSTF2P33240 577 aaKnown RBP eCLIP2.26□□□□□ -2.05
USP53-202ENST00000450251 UGT1A3P35503 534 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 UGT1A5P35504 534 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 PBX1P40424 430 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 GNPDA1P46926 289 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 ST3GAL1Q11201 340 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 GPS1Q13098 491 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 BAMBIQ13145 260 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 FADDQ13158 208 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 HNRNPDQ14103 355 aaKnown RBP2.26□□□□□ -2.05
USP53-202ENST00000450251 SMCO1Q147U7 214 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 CLCA4Q14CN2 919 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 SURF1Q15526 300 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 HES5Q5TA89 166 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 SLX4IPQ5VYV7 408 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 TMEM132EQ6IEE7 984 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 HMBOX1Q6NT76 420 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 Q6ZNX1 250 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 ADAT2Q7Z6V5 191 aaKnown RBP2.26□□□□□ -2.05
USP53-202ENST00000450251 KRT77Q7Z794 578 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 SGMS1Q86VZ5 419 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 MIB1Q86YT6 1006 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 BRSK2Q8IWQ3 736 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 CACTIN-AS1Q8N1I8 211 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 SVOPLQ8N434 492 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 METTL13Q8N6R0 699 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 EMC1Q8N766 993 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 SLC22A8Q8TCC7 542 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 EPS8L1Q8TE68 723 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 IPCEF1Q8WWN9 437 aaPredicted RBP2.26□□□□□ -2.05
USP53-202ENST00000450251 ZHX1-C8orf76Q96EF9 292 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 MRPL48Q96GC5 212 aaKnown RBP2.26□□□□□ -2.05
USP53-202ENST00000450251 CEP295NLQ96MC4 621 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 ACCSQ96QU6 501 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 AGPAT1Q99943 283 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 HEPHQ9BQS7 1158 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 NAT9Q9BTE0 207 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 HGH1Q9BTY7 390 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 SPRTNQ9H040 489 aaPredicted RBP2.26□□□□□ -2.05
USP53-202ENST00000450251 CRISPLD2Q9H0B8 497 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 RANBP3Q9H6Z4 567 aaPredicted RBP2.26□□□□□ -2.05
USP53-202ENST00000450251 NOL11Q9H8H0 719 aaKnown RBP2.26□□□□□ -2.05
USP53-202ENST00000450251 UGT1A7Q9HAW7 530 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 UGT1A10Q9HAW8 530 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 UGT1A8Q9HAW9 530 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 GPN1Q9HCN4 374 aaPredicted RBP2.26□□□□□ -2.05
USP53-202ENST00000450251 COPRSQ9NQ92 184 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 FAM105AQ9NUU6 356 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 MCUBQ9NWR8 336 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 BFARQ9NZS9 450 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 PAK5Q9P286 719 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 DMGDHQ9UI17 866 aaKnown RBP2.26□□□□□ -2.05
USP53-202ENST00000450251 ADAM28Q9UKQ2 775 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 KCNJ14Q9UNX9 436 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 NUMBLQ9Y6R0 609 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 ZNF532Q9HCE3 1301 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 KAT6BQ8WYB5 2073 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 FAM86C2PA6NEL3 165 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 PRSS44E7EML9 344 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 KIAA0391O15091 583 aaKnown RBP2.25□□□□□ -2.05
USP53-202ENST00000450251 GPR37O15354 613 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 PDE8AO60658 829 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 CBX6O95503 412 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 IL1BP01584 269 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 IL6P05231 212 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 UGT2B4P06133 528 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 ZNF806P0C7X5 589 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 KITP10721 976 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms