RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 BOLLQ8N9W6 283 aaKnown RBP5.01□□□□□ -1.61
HMGB1P48-201ENST00000446155 OTUD7AQ8TE49 926 aaPredicted RBP5.01□□□□□ -1.61
HMGB1P48-201ENST00000446155 OVCA2Q8WZ82 227 aa5.01□□□□□ -1.61
HMGB1P48-201ENST00000446155 CENPIQ92674 756 aaPredicted RBP5.01□□□□□ -1.61
HMGB1P48-201ENST00000446155 RSC1A1Q92681 617 aa5.01□□□□□ -1.61
HMGB1P48-201ENST00000446155 HTRA1Q92743 480 aa5.01□□□□□ -1.61
HMGB1P48-201ENST00000446155 RILPL2Q969X0 211 aa5.01□□□□□ -1.61
HMGB1P48-201ENST00000446155 VPS50Q96JG6 964 aa5.01□□□□□ -1.61
HMGB1P48-201ENST00000446155 MAELQ96JY0 434 aaKnown RBP5.01□□□□□ -1.61
HMGB1P48-201ENST00000446155 MMS19Q96T76 1030 aa5.01□□□□□ -1.61
HMGB1P48-201ENST00000446155 PRPF18Q99633 342 aaKnown RBP5.01□□□□□ -1.61
HMGB1P48-201ENST00000446155 CHCHD6Q9BRQ6 235 aa5.01□□□□□ -1.61
HMGB1P48-201ENST00000446155 CIPCQ9C0C6 399 aa5.01□□□□□ -1.61
HMGB1P48-201ENST00000446155 JMJD4Q9H9V9 463 aa5.01□□□□□ -1.61
HMGB1P48-201ENST00000446155 SAP30LQ9HAJ7 183 aa5.01□□□□□ -1.61
HMGB1P48-201ENST00000446155 SAYSD1Q9NPB0 183 aa5.01□□□□□ -1.61
HMGB1P48-201ENST00000446155 KCNK9Q9NPC2 374 aa5.01□□□□□ -1.61
HMGB1P48-201ENST00000446155 IRAK4Q9NWZ3 460 aa5.01□□□□□ -1.61
HMGB1P48-201ENST00000446155 SEMA5BQ9P283 1151 aa5.01□□□□□ -1.61
HMGB1P48-201ENST00000446155 FEM1BQ9UK73 627 aa5.01□□□□□ -1.61
HMGB1P48-201ENST00000446155 M0QZQ0 153 aa5□□□□□ -1.61
HMGB1P48-201ENST00000446155 CA12O43570 354 aa5□□□□□ -1.61
HMGB1P48-201ENST00000446155 PRAMEF2O60811 474 aa5□□□□□ -1.61
HMGB1P48-201ENST00000446155 TMCC2O75069 709 aa5□□□□□ -1.61
HMGB1P48-201ENST00000446155 FAM155BO75949 473 aa5□□□□□ -1.61
HMGB1P48-201ENST00000446155 ATF7P17544 494 aaPredicted RBP5□□□□□ -1.61
HMGB1P48-201ENST00000446155 BMP5P22003 454 aa5□□□□□ -1.61
HMGB1P48-201ENST00000446155 ADD2P35612 726 aa5□□□□□ -1.61
HMGB1P48-201ENST00000446155 PAPOLAP51003 745 aaKnown RBP5□□□□□ -1.61
HMGB1P48-201ENST00000446155 PNLIPRP1P54315 467 aa5□□□□□ -1.61
HMGB1P48-201ENST00000446155 HOXA4Q00056 320 aaPredicted RBP5□□□□□ -1.61
HMGB1P48-201ENST00000446155 TFF2Q03403 129 aa5□□□□□ -1.61
HMGB1P48-201ENST00000446155 TRPC3Q13507 836 aa5□□□□□ -1.61
HMGB1P48-201ENST00000446155 EFR3AQ14156 821 aa5□□□□□ -1.61
HMGB1P48-201ENST00000446155 GRM4Q14833 912 aa5□□□□□ -1.61
HMGB1P48-201ENST00000446155 CCDC184Q52MB2 194 aa5□□□□□ -1.61
HMGB1P48-201ENST00000446155 SLC45A4Q5BKX6 768 aa5□□□□□ -1.61
HMGB1P48-201ENST00000446155 FAM133BQ5BKY9 247 aaKnown RBP5□□□□□ -1.61
HMGB1P48-201ENST00000446155 WDR45BQ5MNZ6 344 aa5□□□□□ -1.61
HMGB1P48-201ENST00000446155 AKNAD1Q5T1N1 836 aa5□□□□□ -1.61
HMGB1P48-201ENST00000446155 FBXO42Q6P3S6 717 aa5□□□□□ -1.61
HMGB1P48-201ENST00000446155 BRINP3Q76B58 766 aa5□□□□□ -1.61
HMGB1P48-201ENST00000446155 ARHGEF25Q86VW2 580 aa5□□□□□ -1.61
HMGB1P48-201ENST00000446155 GATAD2AQ86YP4 633 aa5□□□□□ -1.61
HMGB1P48-201ENST00000446155 HERC6Q8IVU3 1022 aa5□□□□□ -1.61
HMGB1P48-201ENST00000446155 CENPOQ9BU64 300 aa5□□□□□ -1.61
HMGB1P48-201ENST00000446155 SMYD2Q9NRG4 433 aa5□□□□□ -1.61
HMGB1P48-201ENST00000446155 TTLL3Q9Y4R7 772 aa5□□□□□ -1.61
HMGB1P48-201ENST00000446155 WNT6Q9Y6F9 365 aa5□□□□□ -1.61
HMGB1P48-201ENST00000446155 COX11Q9Y6N1 276 aa5□□□□□ -1.61
HMGB1P48-201ENST00000446155 PNMA6EA0A0J9YXQ4 647 aa4.99□□□□□ -1.61
HMGB1P48-201ENST00000446155 FAM90A18PA6NE21 464 aa4.99□□□□□ -1.61
HMGB1P48-201ENST00000446155 FAM90A16PA6NEW6 464 aa4.99□□□□□ -1.61
HMGB1P48-201ENST00000446155 FAM90A9PA6NNJ1 464 aa4.99□□□□□ -1.61
HMGB1P48-201ENST00000446155 FAM90A5PA8MXJ8 464 aa4.99□□□□□ -1.61
HMGB1P48-201ENST00000446155 H3BNC9 293 aa4.99□□□□□ -1.61
HMGB1P48-201ENST00000446155 NUDT3O95989 172 aa4.99□□□□□ -1.61
HMGB1P48-201ENST00000446155 ITGA2BP08514 1039 aa4.99□□□□□ -1.61
HMGB1P48-201ENST00000446155 FAM90A15PP0C7V4 464 aa4.99□□□□□ -1.61
HMGB1P48-201ENST00000446155 FAM90A14PP0C7W9 464 aa4.99□□□□□ -1.61
HMGB1P48-201ENST00000446155 NHLRC4P0CG21 123 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P48-201ENST00000446155 DRD1P21728 446 aa4.99□□□□□ -1.61
HMGB1P48-201ENST00000446155 RPS6KB1P23443 525 aa4.99□□□□□ -1.61
HMGB1P48-201ENST00000446155 KLRK1P26718 216 aa4.99□□□□□ -1.61
HMGB1P48-201ENST00000446155 CST5P28325 142 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P48-201ENST00000446155 NR1H2P55055 460 aa4.99□□□□□ -1.61
HMGB1P48-201ENST00000446155 ELLP55199 621 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P48-201ENST00000446155 INHBEP58166 350 aa4.99□□□□□ -1.61
HMGB1P48-201ENST00000446155 DCAF7P61962 342 aa4.99□□□□□ -1.61
HMGB1P48-201ENST00000446155 CFHR3Q02985 330 aa4.99□□□□□ -1.61
HMGB1P48-201ENST00000446155 MAPK7Q13164 816 aa4.99□□□□□ -1.61
HMGB1P48-201ENST00000446155 PROSER3Q2NL68 480 aa4.99□□□□□ -1.61
HMGB1P48-201ENST00000446155 STRIP1Q5VSL9 837 aa4.99□□□□□ -1.61
HMGB1P48-201ENST00000446155 DENND2CQ68D51 928 aa4.99□□□□□ -1.61
HMGB1P48-201ENST00000446155 CCDC144NLQ6NUI1 221 aa4.99□□□□□ -1.61
HMGB1P48-201ENST00000446155 KLHL17Q6TDP4 642 aa4.99□□□□□ -1.61
HMGB1P48-201ENST00000446155 NEK10Q6ZWH5 1172 aa4.99□□□□□ -1.61
HMGB1P48-201ENST00000446155 ADGRG3Q86Y34 549 aa4.99□□□□□ -1.61
HMGB1P48-201ENST00000446155 C12orf76Q8N812 135 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P48-201ENST00000446155 ADAMTS18Q8TE60 1221 aa4.99□□□□□ -1.61
HMGB1P48-201ENST00000446155 UCMAQ8WVF2 138 aa4.99□□□□□ -1.61
HMGB1P48-201ENST00000446155 DAZAP1Q96EP5 407 aaKnown RBP4.99□□□□□ -1.61
HMGB1P48-201ENST00000446155 EPS8L2Q9H6S3 715 aa4.99□□□□□ -1.61
HMGB1P48-201ENST00000446155 MLXIPQ9HAP2 919 aa4.99□□□□□ -1.61
HMGB1P48-201ENST00000446155 OLA1Q9NTK5 396 aaKnown RBP4.99□□□□□ -1.61
HMGB1P48-201ENST00000446155 AASSQ9UDR5 926 aa4.99□□□□□ -1.61
HMGB1P48-201ENST00000446155 HERC5Q9UII4 1024 aaKnown RBP4.99□□□□□ -1.61
HMGB1P48-201ENST00000446155 FZD4Q9ULV1 537 aa4.99□□□□□ -1.61
HMGB1P48-201ENST00000446155 NOL7Q9UMY1 257 aaKnown RBP4.99□□□□□ -1.61
HMGB1P48-201ENST00000446155 LOC105369274A0A096LPK9 316 aa4.98□□□□□ -1.61
HMGB1P48-201ENST00000446155 LOC102723532A0A0G2JNH3 316 aa4.98□□□□□ -1.61
HMGB1P48-201ENST00000446155 WIPF3A6NGB9 483 aa4.98□□□□□ -1.61
HMGB1P48-201ENST00000446155 HMX3A6NHT5 357 aa4.98□□□□□ -1.61
HMGB1P48-201ENST00000446155 F5H0A9 414 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P48-201ENST00000446155 DNPH1O43598 174 aa4.98□□□□□ -1.61
HMGB1P48-201ENST00000446155 EXOC3O60645 756 aa4.98□□□□□ -1.61
HMGB1P48-201ENST00000446155 USP1O94782 785 aa4.98□□□□□ -1.61
HMGB1P48-201ENST00000446155 MT-CO3P00414 261 aa4.98□□□□□ -1.61
HMGB1P48-201ENST00000446155 TMIGD3P0DMS9 266 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P48-201ENST00000446155 YY1P25490 414 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms