RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 CAB39Q9Y376 341 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 TMED5Q9Y3A6 229 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 SESN1Q9Y6P5 492 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 RUSC2Q8N2Y8 1516 aa3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 A0A0G2JPF8 293 aa3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 SLC12A8A0AV02 714 aa3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 CTAGE9A4FU28 777 aa3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 LRRC72A6NJI9 287 aa3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 HNRNPCL3B7ZW38 293 aa3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 ZNF561-AS1K7EIQ3 104 aa3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 EXOC3O60645 756 aa3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 NOL3O60936 208 aaKnown RBP3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 PHF2O75151 1096 aa3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 CSPG5O95196 566 aa3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 LMNAP02545 664 aaKnown RBP3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 CNPP09543 421 aaKnown RBP3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 HNRNPCL4P0DMR1 293 aa3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 HSPA1AP0DMV8 641 aaKnown RBP3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 HSPA1BP0DMV9 641 aaKnown RBP3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 MTHFD2P13995 350 aa3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 EEF1DP29692 281 aaKnown RBP3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 ADRA1BP35368 520 aa3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 ACAA2P42765 397 aaKnown RBP3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 CPA2P48052 419 aa3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 CPT1AP50416 773 aa3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 ST5P78524 1137 aa3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 COG7P83436 770 aa3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 ATP2C1P98194 919 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 IRF9Q00978 393 aa3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 NSUN2Q08J23 767 aaKnown RBP eCLIP3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 ELAVL1Q15717 326 aaKnown RBP3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 SMU1Q2TAY7 513 aa3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 BOLA3Q53S33 107 aa3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 CCDC157Q569K6 752 aa3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 TCP11X2Q5H9J9 407 aa3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 C3orf38Q5JPI3 329 aa3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 PITRM1Q5JRX3 1037 aa3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 GARNL3Q5VVW2 1013 aa3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 CCDC62Q6P9F0 684 aa3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 CATSPERGQ6ZRH7 1159 aa3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 C15orf52Q6ZUT6 534 aaKnown RBP3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 ADGRA1Q86SQ6 560 aa3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 OSTM1Q86WC4 334 aa3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 KRT73Q86Y46 540 aa3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 C17orf53Q8N3J3 647 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 DPP10Q8N608 796 aa3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 AOPEPQ8N6M6 819 aa3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 ZBTB8BQ8NAP8 495 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 TDRD5Q8NAT2 981 aaKnown RBP3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 USP38Q8NB14 1042 aa3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 GLIS1Q8NBF1 620 aa3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 PCSK9Q8NBP7 692 aaKnown RBP3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 SCAMP5Q8TAC9 235 aa3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 FIBINQ8TAL6 211 aa3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 SPATA20Q8TB22 786 aa3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 CSGALNACT1Q8TDX6 532 aa3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 FAM216AQ8WUB2 273 aa3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 SLC25A43Q8WUT9 341 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 RTF1Q92541 710 aaKnown RBP3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 NACC2Q96BF6 587 aa3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 SDCCAG3Q96C92 435 aa3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 PDLIM5Q96HC4 596 aaKnown RBP3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 RPL10LQ96L21 214 aaKnown RBP3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 TXN2Q99757 166 aa3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 REEP2Q9BRK0 252 aa3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 THUMPD3Q9BV44 507 aaKnown RBP3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 ANO3Q9BYT9 981 aa3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 KRT23Q9C075 422 aa3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 PRDM12Q9H4Q4 367 aa3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 TASP1Q9H6P5 420 aa3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 SMURF1Q9HCE7 757 aa3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 SEPSECSQ9HD40 501 aaKnown RBP3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 TM9SF3Q9HD45 589 aa3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 CD93Q9NPY3 652 aa3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 NRIP3Q9NQ35 241 aa3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 NECTIN3Q9NQS3 549 aa3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 NINJ2Q9NZG7 142 aa3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 SELENONQ9NZV5 590 aa3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 CALCOCO1Q9P1Z2 691 aa3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 PI4KBQ9UBF8 816 aa3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 CLIP2Q9UDT6 1046 aa3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 FAM153AQ9UHL3 310 aa3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 ANAPC5Q9UJX4 755 aa3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 CPSF3Q9UKF6 684 aaKnown RBP3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 NAALADL1Q9UQQ1 740 aa3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 ZNF804BA4D1E1 1349 aa3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 SPAG9O60271 1321 aaKnown RBP3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 NSD2O96028 1365 aa3.85□□□□□ -1.79
HMGB1P12-201ENST00000438594 A4D1N5 150 aa3.84□□□□□ -1.79
HMGB1P12-201ENST00000438594 CLCA1A8K7I4 914 aa3.84□□□□□ -1.79
HMGB1P12-201ENST00000438594 MAN2B1O00754 1011 aa3.84□□□□□ -1.79
HMGB1P12-201ENST00000438594 CEP104O60308 925 aa3.84□□□□□ -1.79
HMGB1P12-201ENST00000438594 TBC1D4O60343 1298 aa3.84□□□□□ -1.79
HMGB1P12-201ENST00000438594 ENTPD3O75355 529 aa3.84□□□□□ -1.79
HMGB1P12-201ENST00000438594 DDHD2O94830 711 aa3.84□□□□□ -1.79
HMGB1P12-201ENST00000438594 EPN2O95208 641 aa3.84□□□□□ -1.79
HMGB1P12-201ENST00000438594 IPO7O95373 1038 aaKnown RBP3.84□□□□□ -1.79
HMGB1P12-201ENST00000438594 GCNT3O95395 438 aa3.84□□□□□ -1.79
HMGB1P12-201ENST00000438594 METTL18O95568 372 aa3.84□□□□□ -1.79
HMGB1P12-201ENST00000438594 PNPP00491 289 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms