RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 SLC6A4P31645 630 aa16.27■□□□□ 0.2
DDX55-203ENST00000421670 SLC11A2P49281 568 aa16.27■□□□□ 0.2
DDX55-203ENST00000421670 SCAPQ12770 1279 aa16.27■□□□□ 0.2
DDX55-203ENST00000421670 CA9Q16790 459 aa16.27■□□□□ 0.2
DDX55-203ENST00000421670 HADHQ16836 314 aaKnown RBP16.27■□□□□ 0.2
DDX55-203ENST00000421670 MS4A13Q5J8X5 152 aa16.27■□□□□ 0.2
DDX55-203ENST00000421670 EFHC2Q5JST6 749 aa16.27■□□□□ 0.2
DDX55-203ENST00000421670 ERMARDQ5T6L9 678 aa16.27■□□□□ 0.2
DDX55-203ENST00000421670 RAP1GAP2Q684P5 730 aa16.27■□□□□ 0.2
DDX55-203ENST00000421670 TRIM68Q6AZZ1 485 aa16.27■□□□□ 0.2
DDX55-203ENST00000421670 PEX26Q7Z412 305 aa16.27■□□□□ 0.2
DDX55-203ENST00000421670 NT5DC3Q86UY8 548 aa16.27■□□□□ 0.2
DDX55-203ENST00000421670 CHSY1Q86X52 802 aa16.27■□□□□ 0.2
DDX55-203ENST00000421670 MFSD6LQ8IWD5 586 aa16.27■□□□□ 0.2
DDX55-203ENST00000421670 ZDHHC14Q8IZN3 488 aa16.27■□□□□ 0.2
DDX55-203ENST00000421670 PLCD3Q8N3E9 789 aa16.27■□□□□ 0.2
DDX55-203ENST00000421670 TRIM58Q8NG06 486 aa16.27■□□□□ 0.2
DDX55-203ENST00000421670 CD101Q93033 1021 aa16.27■□□□□ 0.2
DDX55-203ENST00000421670 E2F7Q96AV8 911 aa16.27■□□□□ 0.2
DDX55-203ENST00000421670 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.27■□□□□ 0.2
DDX55-203ENST00000421670 SLC12A6Q9UHW9 1150 aa16.27■□□□□ 0.2
DDX55-203ENST00000421670 KIAA1549LQ6ZVL6 1849 aa16.27■□□□□ 0.19
DDX55-203ENST00000421670 LOC730098B7Z3J9 87 aa16.26■□□□□ 0.19
DDX55-203ENST00000421670 KIF5CO60282 957 aa16.26■□□□□ 0.19
DDX55-203ENST00000421670 ASGR2P07307 311 aa16.26■□□□□ 0.19
DDX55-203ENST00000421670 RARAP10276 462 aa16.26■□□□□ 0.19
DDX55-203ENST00000421670 PSMC3P17980 439 aa16.26■□□□□ 0.19
DDX55-203ENST00000421670 AIF1P55008 147 aa16.26■□□□□ 0.19
DDX55-203ENST00000421670 ZP2Q05996 745 aa16.26■□□□□ 0.19
DDX55-203ENST00000421670 FCHO2Q0JRZ9 810 aa16.26■□□□□ 0.19
DDX55-203ENST00000421670 ZNF569Q5MCW4 686 aa16.26■□□□□ 0.19
DDX55-203ENST00000421670 RFWD3Q6PCD5 774 aa16.26■□□□□ 0.19
DDX55-203ENST00000421670 ADHFE1Q8IWW8 467 aa16.26■□□□□ 0.19
DDX55-203ENST00000421670 KRT35Q92764 455 aa16.26■□□□□ 0.19
DDX55-203ENST00000421670 MYEOVQ96EZ4 313 aa16.26■□□□□ 0.19
DDX55-203ENST00000421670 LINC00597Q9H2U6 94 aa16.26■□□□□ 0.19
DDX55-203ENST00000421670 DHX35Q9H5Z1 703 aaKnown RBP16.26■□□□□ 0.19
DDX55-203ENST00000421670 KCNK12Q9HB15 430 aa16.26■□□□□ 0.19
DDX55-203ENST00000421670 TMEM51Q9NW97 253 aa16.26■□□□□ 0.19
DDX55-203ENST00000421670 AMFRQ9UKV5 643 aa16.26■□□□□ 0.19
DDX55-203ENST00000421670 FAM72CH0Y354 149 aa16.26■□□□□ 0.19
DDX55-203ENST00000421670 LATS1O95835 1130 aa16.26■□□□□ 0.19
DDX55-203ENST00000421670 DNA2P51530 1060 aa16.26■□□□□ 0.19
DDX55-203ENST00000421670 ZFYVE27Q5T4F4 411 aa16.26■□□□□ 0.19
DDX55-203ENST00000421670 ADGRF1Q5T601 910 aa16.26■□□□□ 0.19
DDX55-203ENST00000421670 FAM72AQ5TYM5 149 aa16.26■□□□□ 0.19
DDX55-203ENST00000421670 FAM72DQ6L9T8 149 aa16.26■□□□□ 0.19
DDX55-203ENST00000421670 POLNQ7Z5Q5 900 aa16.26■□□□□ 0.19
DDX55-203ENST00000421670 FAM72BQ86X60 149 aa16.26■□□□□ 0.19
DDX55-203ENST00000421670 RHOT1Q8IXI2 618 aa16.26■□□□□ 0.19
DDX55-203ENST00000421670 SLC35F6Q8N357 371 aa16.26■□□□□ 0.19
DDX55-203ENST00000421670 OSCP1Q8WVF1 389 aa16.26■□□□□ 0.19
DDX55-203ENST00000421670 TEKT4Q8WW24 435 aa16.26■□□□□ 0.19
DDX55-203ENST00000421670 ATXN2LQ8WWM7 1075 aaKnown RBP16.26■□□□□ 0.19
DDX55-203ENST00000421670 AZIN2Q96A70 460 aa16.26■□□□□ 0.19
DDX55-203ENST00000421670 PRICKLE1Q96MT3 831 aaPredicted RBP16.26■□□□□ 0.19
DDX55-203ENST00000421670 HAPLN3Q96S86 360 aa16.26■□□□□ 0.19
DDX55-203ENST00000421670 KCTD15Q96SI1 283 aaPredicted RBP16.26■□□□□ 0.19
DDX55-203ENST00000421670 PRMT1Q99873 361 aaKnown RBP16.26■□□□□ 0.19
DDX55-203ENST00000421670 DUS2Q9NX74 493 aaKnown RBP16.26■□□□□ 0.19
DDX55-203ENST00000421670 STOML2Q9UJZ1 356 aa16.26■□□□□ 0.19
DDX55-203ENST00000421670 VANGL2Q9ULK5 521 aa16.26■□□□□ 0.19
DDX55-203ENST00000421670 ZNF510Q9Y2H8 683 aa16.26■□□□□ 0.19
DDX55-203ENST00000421670 PSTPIP1O43586 416 aa16.25■□□□□ 0.19
DDX55-203ENST00000421670 TSPAN3O60637 253 aa16.25■□□□□ 0.19
DDX55-203ENST00000421670 KRT7P08729 469 aa16.25■□□□□ 0.19
DDX55-203ENST00000421670 ARSAP15289 507 aa16.25■□□□□ 0.19
DDX55-203ENST00000421670 TACR2P21452 398 aa16.25■□□□□ 0.19
DDX55-203ENST00000421670 GDI1P31150 447 aa16.25■□□□□ 0.19
DDX55-203ENST00000421670 CTNNA1P35221 906 aaKnown RBP16.25■□□□□ 0.19
DDX55-203ENST00000421670 IFNAR2P48551 515 aa16.25■□□□□ 0.19
DDX55-203ENST00000421670 SGSHP51688 502 aa16.25■□□□□ 0.19
DDX55-203ENST00000421670 TNK2Q07912 1038 aa16.25■□□□□ 0.19
DDX55-203ENST00000421670 AUHQ13825 339 aaKnown RBP16.25■□□□□ 0.19
DDX55-203ENST00000421670 EML3Q32P44 896 aa16.25■□□□□ 0.19
DDX55-203ENST00000421670 BOLA3Q53S33 107 aa16.25■□□□□ 0.19
DDX55-203ENST00000421670 PPP6R3Q5H9R7 873 aaPredicted RBP16.25■□□□□ 0.19
DDX55-203ENST00000421670 C14orf80Q86SX3 495 aa16.25■□□□□ 0.19
DDX55-203ENST00000421670 FAM217AQ8IXS0 508 aa16.25■□□□□ 0.19
DDX55-203ENST00000421670 YAF2Q8IY57 180 aa16.25■□□□□ 0.19
DDX55-203ENST00000421670 DEPDC1BQ8WUY9 529 aa16.25■□□□□ 0.19
DDX55-203ENST00000421670 BHMTQ93088 406 aa16.25■□□□□ 0.19
DDX55-203ENST00000421670 ASB2Q96Q27 587 aa16.25■□□□□ 0.19
DDX55-203ENST00000421670 EBF3Q9H4W6 596 aa16.25■□□□□ 0.19
DDX55-203ENST00000421670 THG1LQ9NWX6 298 aaKnown RBP16.25■□□□□ 0.19
DDX55-203ENST00000421670 OR12D3Q9UGF7 316 aa16.25■□□□□ 0.19
DDX55-203ENST00000421670 PRKAG3Q9UGI9 489 aa16.25■□□□□ 0.19
DDX55-203ENST00000421670 BDP1A6H8Y1 2624 aa16.25■□□□□ 0.19
DDX55-203ENST00000421670 F5H5T6 163 aa16.24■□□□□ 0.19
DDX55-203ENST00000421670 PI4K2BG5E9Z4 385 aa16.24■□□□□ 0.19
DDX55-203ENST00000421670 SRGAP2O75044 1071 aa16.24■□□□□ 0.19
DDX55-203ENST00000421670 KRT1P04264 644 aa16.24■□□□□ 0.19
DDX55-203ENST00000421670 CD48P09326 243 aa16.24■□□□□ 0.19
DDX55-203ENST00000421670 IRAK1P51617 712 aa16.24■□□□□ 0.19
DDX55-203ENST00000421670 MLLT6P55198 1093 aaPredicted RBP16.24■□□□□ 0.19
DDX55-203ENST00000421670 MEI1Q5TIA1 1274 aa16.24■□□□□ 0.19
DDX55-203ENST00000421670 LRRC38Q5VT99 294 aa16.24■□□□□ 0.19
DDX55-203ENST00000421670 TPGS1Q6ZTW0 290 aa16.24■□□□□ 0.19
DDX55-203ENST00000421670 CIR1Q86X95 450 aaPredicted RBP16.24■□□□□ 0.19
DDX55-203ENST00000421670 LGI2Q8N0V4 545 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms