RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 IYDQ6PHW0 289 aa21.88■■□□□ 1.09
USP48-205ENST00000421625 TRIM74Q86UV6 250 aa21.88■■□□□ 1.09
USP48-205ENST00000421625 TRIM73Q86UV7 250 aa21.88■■□□□ 1.09
USP48-205ENST00000421625 ATG4CQ96DT6 458 aa21.88■■□□□ 1.09
USP48-205ENST00000421625 CNPY3Q9BT09 278 aa21.88■■□□□ 1.09
USP48-205ENST00000421625 TMEM134Q9H6X4 195 aa21.88■■□□□ 1.09
USP48-205ENST00000421625 ZNF302Q9NR11 478 aa21.88■■□□□ 1.09
USP48-205ENST00000421625 ZNF358Q9NW07 568 aa21.88■■□□□ 1.09
USP48-205ENST00000421625 AP4B1Q9Y6B7 739 aa21.88■■□□□ 1.09
USP48-205ENST00000421625 ALOX15P16050 662 aaPredicted RBP21.88■■□□□ 1.09
USP48-205ENST00000421625 ABCE1P61221 599 aaKnown RBP21.88■■□□□ 1.09
USP48-205ENST00000421625 STXBP5Q5T5C0 1151 aa21.88■■□□□ 1.09
USP48-205ENST00000421625 XRRA1Q6P2D8 792 aa21.88■■□□□ 1.09
USP48-205ENST00000421625 KCNN1Q92952 543 aa21.88■■□□□ 1.09
USP48-205ENST00000421625 KCNK16Q96T55 309 aa21.88■■□□□ 1.09
USP48-205ENST00000421625 TMEM216Q9P0N5 145 aa21.88■■□□□ 1.09
USP48-205ENST00000421625 PFDN1O60925 122 aa21.87■■□□□ 1.09
USP48-205ENST00000421625 PCSK6P29122 969 aa21.87■■□□□ 1.09
USP48-205ENST00000421625 MSX2P35548 267 aaPredicted RBP21.87■■□□□ 1.09
USP48-205ENST00000421625 KLF10Q13118 480 aa21.87■■□□□ 1.09
USP48-205ENST00000421625 SLC9B1Q4ZJI4 515 aa21.87■■□□□ 1.09
USP48-205ENST00000421625 CASC4Q6P4E1 433 aa21.87■■□□□ 1.09
USP48-205ENST00000421625 PACS1Q6VY07 963 aa21.87■■□□□ 1.09
USP48-205ENST00000421625 LPAR1Q92633 364 aa21.87■■□□□ 1.09
USP48-205ENST00000421625 ELOVL4Q9GZR5 314 aa21.87■■□□□ 1.09
USP48-205ENST00000421625 SSX2IPQ9Y2D8 614 aa21.87■■□□□ 1.09
USP48-205ENST00000421625 C2CD4BA6NLJ0 364 aa21.87■■□□□ 1.09
USP48-205ENST00000421625 SRGAP2CP0DJJ0 459 aa21.87■■□□□ 1.09
USP48-205ENST00000421625 SRGAP2BP0DMP2 458 aa21.87■■□□□ 1.09
USP48-205ENST00000421625 MYL4P12829 197 aa21.87■■□□□ 1.09
USP48-205ENST00000421625 MRPS22P82650 360 aaKnown RBP21.87■■□□□ 1.09
USP48-205ENST00000421625 GRM1Q13255 1194 aa21.87■■□□□ 1.09
USP48-205ENST00000421625 PRPF18Q99633 342 aaKnown RBP21.87■■□□□ 1.09
USP48-205ENST00000421625 COG4Q9H9E3 785 aa21.87■■□□□ 1.09
USP48-205ENST00000421625 PCDH18Q9HCL0 1135 aa21.87■■□□□ 1.09
USP48-205ENST00000421625 C6orf203Q9P0P8 240 aaPredicted RBP21.87■■□□□ 1.09
USP48-205ENST00000421625 RALBP11234 206 aa21.86■■□□□ 1.09
USP48-205ENST00000421625 TGM2P21980 687 aa21.86■■□□□ 1.09
USP48-205ENST00000421625 PTPN11Q06124 597 aaPredicted RBP21.86■■□□□ 1.09
USP48-205ENST00000421625 ILDR2Q71H61 639 aa21.86■■□□□ 1.09
USP48-205ENST00000421625 AGR3Q8TD06 166 aa21.86■■□□□ 1.09
USP48-205ENST00000421625 CLMNQ96JQ2 1002 aa21.86■■□□□ 1.09
USP48-205ENST00000421625 SENP6Q9GZR1 1112 aaPredicted RBP21.86■■□□□ 1.09
USP48-205ENST00000421625 RPAP3Q9H6T3 665 aaPredicted RBP21.86■■□□□ 1.09
USP48-205ENST00000421625 COPG2Q9UBF2 871 aa21.86■■□□□ 1.09
USP48-205ENST00000421625 CPSF3Q9UKF6 684 aaKnown RBP21.86■■□□□ 1.09
USP48-205ENST00000421625 AIM2O14862 343 aa21.86■■□□□ 1.09
USP48-205ENST00000421625 MSCO60682 206 aa21.86■■□□□ 1.09
USP48-205ENST00000421625 CNTFP26441 200 aa21.86■■□□□ 1.09
USP48-205ENST00000421625 GPD2P43304 727 aa21.86■■□□□ 1.09
USP48-205ENST00000421625 OR6B2Q6IFH4 312 aa21.86■■□□□ 1.09
USP48-205ENST00000421625 CDR2LQ86X02 465 aaPredicted RBP21.86■■□□□ 1.09
USP48-205ENST00000421625 MAPK15Q8TD08 544 aa21.86■■□□□ 1.09
USP48-205ENST00000421625 LENG8Q96PV6 779 aaPredicted RBP21.86■■□□□ 1.09
USP48-205ENST00000421625 MRPS26Q9BYN8 205 aaKnown RBP21.86■■□□□ 1.09
USP48-205ENST00000421625 MAFBQ9Y5Q3 323 aaPredicted RBP21.86■■□□□ 1.09
USP48-205ENST00000421625 A0A0J9YVX5 310 aa21.85■■□□□ 1.09
USP48-205ENST00000421625 VWA5AO00534 786 aa21.85■■□□□ 1.09
USP48-205ENST00000421625 OGTO15294 1046 aa21.85■■□□□ 1.09
USP48-205ENST00000421625 CDK4P11802 303 aa21.85■■□□□ 1.09
USP48-205ENST00000421625 GRK2P25098 689 aa21.85■■□□□ 1.09
USP48-205ENST00000421625 PPP6R3Q5H9R7 873 aaPredicted RBP21.85■■□□□ 1.09
USP48-205ENST00000421625 C6orf52Q5T4I8 152 aa21.85■■□□□ 1.09
USP48-205ENST00000421625 ZPBP2Q6X784 338 aa21.85■■□□□ 1.09
USP48-205ENST00000421625 MAP7D3Q8IWC1 876 aa21.85■■□□□ 1.09
USP48-205ENST00000421625 ZNF781Q8N8C0 355 aa21.85■■□□□ 1.09
USP48-205ENST00000421625 NSUN6Q8TEA1 469 aaKnown RBP21.85■■□□□ 1.09
USP48-205ENST00000421625 RTKNQ9BST9 563 aa21.85■■□□□ 1.09
USP48-205ENST00000421625 Q9H521 79 aa21.85■■□□□ 1.09
USP48-205ENST00000421625 NGRNQ9NPE2 291 aaKnown RBP21.85■■□□□ 1.09
USP48-205ENST00000421625 TCF7P36402 384 aaPredicted RBP21.85■■□□□ 1.09
USP48-205ENST00000421625 SERPINB5P36952 375 aa21.85■■□□□ 1.09
USP48-205ENST00000421625 HARS2P49590 506 aaKnown RBP21.85■■□□□ 1.09
USP48-205ENST00000421625 NUDT2P50583 147 aa21.85■■□□□ 1.09
USP48-205ENST00000421625 NIPAL4Q0D2K0 466 aa21.85■■□□□ 1.09
USP48-205ENST00000421625 SH2D4BQ5SQS7 431 aa21.85■■□□□ 1.09
USP48-205ENST00000421625 SLC9A4Q6AI14 798 aa21.85■■□□□ 1.09
USP48-205ENST00000421625 FAM183BPQ6ZVS7 135 aa21.85■■□□□ 1.09
USP48-205ENST00000421625 KLHL23Q8NBE8 558 aa21.85■■□□□ 1.09
USP48-205ENST00000421625 ACMSDQ8TDX5 336 aa21.85■■□□□ 1.09
USP48-205ENST00000421625 ATP2A3Q93084 1043 aa21.85■■□□□ 1.09
USP48-205ENST00000421625 PGBD4Q96DM1 585 aa21.85■■□□□ 1.09
USP48-205ENST00000421625 PHF12Q96QT6 1004 aa21.85■■□□□ 1.09
USP48-205ENST00000421625 COPS7BQ9H9Q2 264 aaPredicted RBP21.85■■□□□ 1.09
USP48-205ENST00000421625 ATXN3P54252 364 aaPredicted RBP21.84■■□□□ 1.09
USP48-205ENST00000421625 GBE1Q04446 702 aa21.84■■□□□ 1.09
USP48-205ENST00000421625 PPM1LQ5SGD2 360 aa21.84■■□□□ 1.09
USP48-205ENST00000421625 TNS4Q8IZW8 715 aa21.84■■□□□ 1.09
USP48-205ENST00000421625 LRGUKQ96M69 825 aa21.84■■□□□ 1.09
USP48-205ENST00000421625 ACO2Q99798 780 aaKnown RBP21.84■■□□□ 1.09
USP48-205ENST00000421625 STK39Q9UEW8 545 aa21.84■■□□□ 1.09
USP48-205ENST00000421625 DCDC2Q9UHG0 476 aa21.84■■□□□ 1.09
USP48-205ENST00000421625 RAB26Q9ULW5 256 aa21.84■■□□□ 1.09
USP48-205ENST00000421625 TNNC2P02585 160 aa21.84■■□□□ 1.09
USP48-205ENST00000421625 ACAT1P24752 427 aaKnown RBP21.84■■□□□ 1.09
USP48-205ENST00000421625 THOP1P52888 689 aa21.84■■□□□ 1.09
USP48-205ENST00000421625 CDKL1Q00532 357 aa21.84■■□□□ 1.09
USP48-205ENST00000421625 SLC10A2Q12908 348 aaPredicted RBP21.84■■□□□ 1.09
USP48-205ENST00000421625 ADGRE1Q14246 886 aa21.84■■□□□ 1.09
USP48-205ENST00000421625 RARS2Q5T160 578 aaKnown RBP21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms