RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 COPS7BQ9H9Q2 264 aaPredicted RBP13.58□□□□□ -0.23
TNFRSF8-203ENST00000417814 TXNRD2Q9NNW7 524 aa13.58□□□□□ -0.23
TNFRSF8-203ENST00000417814 PIN4Q9Y237 131 aaKnown RBP13.58□□□□□ -0.23
TNFRSF8-203ENST00000417814 RNF103O00237 685 aa13.58□□□□□ -0.24
TNFRSF8-203ENST00000417814 TM9SF1O15321 606 aa13.58□□□□□ -0.24
TNFRSF8-203ENST00000417814 AHCYL1O43865 530 aa13.58□□□□□ -0.24
TNFRSF8-203ENST00000417814 RALBP11234 206 aa13.58□□□□□ -0.24
TNFRSF8-203ENST00000417814 GPD2P43304 727 aa13.58□□□□□ -0.24
TNFRSF8-203ENST00000417814 MRPS5P82675 430 aaKnown RBP13.58□□□□□ -0.24
TNFRSF8-203ENST00000417814 FAM47CQ5HY64 1035 aa13.58□□□□□ -0.24
TNFRSF8-203ENST00000417814 CATSPERGQ6ZRH7 1159 aa13.58□□□□□ -0.24
TNFRSF8-203ENST00000417814 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.58□□□□□ -0.24
TNFRSF8-203ENST00000417814 AGBL3Q8NEM8 1001 aa13.58□□□□□ -0.24
TNFRSF8-203ENST00000417814 XPNPEP3Q9NQH7 507 aa13.58□□□□□ -0.24
TNFRSF8-203ENST00000417814 FARP1Q9Y4F1 1045 aaPredicted RBP13.58□□□□□ -0.24
TNFRSF8-203ENST00000417814 SLC15A5A6NIM6 579 aa13.58□□□□□ -0.24
TNFRSF8-203ENST00000417814 JCHAINP01591 159 aa13.58□□□□□ -0.24
TNFRSF8-203ENST00000417814 NAGLUP54802 743 aa13.58□□□□□ -0.24
TNFRSF8-203ENST00000417814 MAP3K7CLP57077 242 aa13.58□□□□□ -0.24
TNFRSF8-203ENST00000417814 SNRPFP62306 86 aaKnown RBP13.58□□□□□ -0.24
TNFRSF8-203ENST00000417814 MRPS35P82673 323 aaKnown RBP13.58□□□□□ -0.24
TNFRSF8-203ENST00000417814 PRKD1Q15139 912 aaPredicted RBP13.58□□□□□ -0.24
TNFRSF8-203ENST00000417814 SOWAHAQ2M3V2 549 aa13.58□□□□□ -0.24
TNFRSF8-203ENST00000417814 PITRM1Q5JRX3 1037 aa13.58□□□□□ -0.24
TNFRSF8-203ENST00000417814 PDPK2PQ6A1A2 396 aa13.58□□□□□ -0.24
TNFRSF8-203ENST00000417814 DPP9Q86TI2 863 aa13.58□□□□□ -0.24
TNFRSF8-203ENST00000417814 PLD6Q8N2A8 252 aaKnown RBP13.58□□□□□ -0.24
TNFRSF8-203ENST00000417814 GDPD5Q8WTR4 605 aa13.58□□□□□ -0.24
TNFRSF8-203ENST00000417814 PRDM12Q9H4Q4 367 aa13.58□□□□□ -0.24
TNFRSF8-203ENST00000417814 NRDE2Q9H7Z3 1164 aa13.58□□□□□ -0.24
TNFRSF8-203ENST00000417814 CHST12Q9NRB3 414 aa13.58□□□□□ -0.24
TNFRSF8-203ENST00000417814 RHBDL2Q9NX52 303 aa13.58□□□□□ -0.24
TNFRSF8-203ENST00000417814 TAGLN3Q9UI15 199 aa13.58□□□□□ -0.24
TNFRSF8-203ENST00000417814 ACTL7BQ9Y614 415 aa13.58□□□□□ -0.24
TNFRSF8-203ENST00000417814 TTC24A2A3L6 582 aaPredicted RBP13.57□□□□□ -0.24
TNFRSF8-203ENST00000417814 TMEM233B4DJY2 109 aa13.57□□□□□ -0.24
TNFRSF8-203ENST00000417814 ACKR2O00590 384 aa13.57□□□□□ -0.24
TNFRSF8-203ENST00000417814 GNAZP19086 355 aa13.57□□□□□ -0.24
TNFRSF8-203ENST00000417814 COPAP53621 1224 aa13.57□□□□□ -0.24
TNFRSF8-203ENST00000417814 AQP4P55087 323 aa13.57□□□□□ -0.24
TNFRSF8-203ENST00000417814 TBL3Q12788 808 aaKnown RBP13.57□□□□□ -0.24
TNFRSF8-203ENST00000417814 WASHC2DQ5SRD0 308 aa13.57□□□□□ -0.24
TNFRSF8-203ENST00000417814 TTC30AQ86WT1 665 aa13.57□□□□□ -0.24
TNFRSF8-203ENST00000417814 IPMKQ8NFU5 416 aa13.57□□□□□ -0.24
TNFRSF8-203ENST00000417814 EZH1Q92800 747 aaPredicted RBP13.57□□□□□ -0.24
TNFRSF8-203ENST00000417814 PHF21BQ96EK2 531 aa13.57□□□□□ -0.24
TNFRSF8-203ENST00000417814 CDRT15Q96T59 188 aa13.57□□□□□ -0.24
TNFRSF8-203ENST00000417814 APBA2Q99767 749 aa13.57□□□□□ -0.24
TNFRSF8-203ENST00000417814 EIF2AQ9BY44 585 aaKnown RBP13.57□□□□□ -0.24
TNFRSF8-203ENST00000417814 CPA4Q9UI42 421 aa13.57□□□□□ -0.24
TNFRSF8-203ENST00000417814 MAFBQ9Y5Q3 323 aaPredicted RBP13.57□□□□□ -0.24
TNFRSF8-203ENST00000417814 ABCA3Q99758 1704 aa13.57□□□□□ -0.24
TNFRSF8-203ENST00000417814 MAFGO15525 162 aa13.57□□□□□ -0.24
TNFRSF8-203ENST00000417814 DYNC1LI2O43237 492 aaPredicted RBP13.57□□□□□ -0.24
TNFRSF8-203ENST00000417814 HNRNPLP14866 589 aaKnown RBP eCLIP13.57□□□□□ -0.24
TNFRSF8-203ENST00000417814 ZNF143P52747 638 aaPredicted RBP13.57□□□□□ -0.24
TNFRSF8-203ENST00000417814 CTBP1Q13363 440 aa13.57□□□□□ -0.24
TNFRSF8-203ENST00000417814 MXD4Q14582 209 aaPredicted RBP13.57□□□□□ -0.24
TNFRSF8-203ENST00000417814 NOMO1Q15155 1222 aa13.57□□□□□ -0.24
TNFRSF8-203ENST00000417814 PARP6Q2NL67 630 aa13.57□□□□□ -0.24
TNFRSF8-203ENST00000417814 SH2D4BQ5SQS7 431 aa13.57□□□□□ -0.24
TNFRSF8-203ENST00000417814 CWF19L1Q69YN2 538 aaKnown RBP13.57□□□□□ -0.24
TNFRSF8-203ENST00000417814 LDB1Q86U70 411 aaPredicted RBP13.57□□□□□ -0.24
TNFRSF8-203ENST00000417814 TMPRSS6Q8IU80 811 aa13.57□□□□□ -0.24
TNFRSF8-203ENST00000417814 TRIM8Q9BZR9 551 aa13.57□□□□□ -0.24
TNFRSF8-203ENST00000417814 NXF3Q9H4D5 531 aaKnown RBP13.57□□□□□ -0.24
TNFRSF8-203ENST00000417814 SLX4Q8IY92 1834 aa13.57□□□□□ -0.24
TNFRSF8-203ENST00000417814 NEMP2A6NFY4 417 aa13.57□□□□□ -0.24
TNFRSF8-203ENST00000417814 TBC1D12O60347 775 aa13.57□□□□□ -0.24
TNFRSF8-203ENST00000417814 MAFO75444 373 aaPredicted RBP13.57□□□□□ -0.24
TNFRSF8-203ENST00000417814 RTN3O95197 1032 aaPredicted RBP13.57□□□□□ -0.24
TNFRSF8-203ENST00000417814 DSG1Q02413 1049 aa13.57□□□□□ -0.24
TNFRSF8-203ENST00000417814 MED21Q13503 144 aa13.57□□□□□ -0.24
TNFRSF8-203ENST00000417814 ART3Q13508 389 aa13.57□□□□□ -0.24
TNFRSF8-203ENST00000417814 ACVR2BQ13705 512 aa13.57□□□□□ -0.24
TNFRSF8-203ENST00000417814 SNX32Q86XE0 403 aa13.57□□□□□ -0.24
TNFRSF8-203ENST00000417814 SIX6OS1Q8N1H7 587 aa13.57□□□□□ -0.24
TNFRSF8-203ENST00000417814 ZNF781Q8N8C0 355 aa13.57□□□□□ -0.24
TNFRSF8-203ENST00000417814 ACVR1CQ8NER5 493 aa13.57□□□□□ -0.24
TNFRSF8-203ENST00000417814 ALKBH8Q96BT7 664 aaKnown RBP13.57□□□□□ -0.24
TNFRSF8-203ENST00000417814 RHOBTB2Q9BYZ6 727 aa13.57□□□□□ -0.24
TNFRSF8-203ENST00000417814 TK2O00142 265 aa13.56□□□□□ -0.24
TNFRSF8-203ENST00000417814 SCAMP3O14828 347 aaKnown RBP13.56□□□□□ -0.24
TNFRSF8-203ENST00000417814 MPSTP25325 297 aa13.56□□□□□ -0.24
TNFRSF8-203ENST00000417814 DLG1Q12959 904 aa13.56□□□□□ -0.24
TNFRSF8-203ENST00000417814 USP10Q14694 798 aaKnown RBP13.56□□□□□ -0.24
TNFRSF8-203ENST00000417814 ANO4Q32M45 955 aa13.56□□□□□ -0.24
TNFRSF8-203ENST00000417814 TMEM259Q4ZIN3 620 aa13.56□□□□□ -0.24
TNFRSF8-203ENST00000417814 METTL7BQ6UX53 244 aa13.56□□□□□ -0.24
TNFRSF8-203ENST00000417814 ADGRF2Q8IZF7 708 aa13.56□□□□□ -0.24
TNFRSF8-203ENST00000417814 ZNF778Q96MU6 729 aa13.56□□□□□ -0.24
TNFRSF8-203ENST00000417814 CHRAC1Q9NRG0 131 aa13.56□□□□□ -0.24
TNFRSF8-203ENST00000417814 KRT82Q9NSB4 513 aa13.56□□□□□ -0.24
TNFRSF8-203ENST00000417814 TLK1Q9UKI8 766 aa13.56□□□□□ -0.24
TNFRSF8-203ENST00000417814 HBS1LQ9Y450 684 aaKnown RBP13.56□□□□□ -0.24
TNFRSF8-203ENST00000417814 TEX264Q9Y6I9 313 aa13.56□□□□□ -0.24
TNFRSF8-203ENST00000417814 NUP205Q92621 2012 aa13.56□□□□□ -0.24
TNFRSF8-203ENST00000417814 ANKRD33BA6NCL7 494 aa13.56□□□□□ -0.24
TNFRSF8-203ENST00000417814 C3orf70A6NLC5 250 aaPredicted RBP13.56□□□□□ -0.24
TNFRSF8-203ENST00000417814 ADCY6O43306 1168 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms