RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, human

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF1-206	ENST00000413725	HADHB	P55084	474 aa	Known RBP	13.63	□□□□□ -0.23
SF1-206	ENST00000413725	GAD2	Q05329	585 aa		13.63	□□□□□ -0.23
SF1-206	ENST00000413725	ANO4	Q32M45	955 aa		13.63	□□□□□ -0.23
SF1-206	ENST00000413725	LY6G5C	Q5SRR4	150 aa		13.63	□□□□□ -0.23
SF1-206	ENST00000413725	CHSY1	Q86X52	802 aa		13.63	□□□□□ -0.23
SF1-206	ENST00000413725	NTAN1	Q96AB6	310 aa		13.63	□□□□□ -0.23
SF1-206	ENST00000413725	MSANTD3	Q96H12	275 aa		13.63	□□□□□ -0.23
SF1-206	ENST00000413725	HAPLN3	Q96S86	360 aa		13.63	□□□□□ -0.23
SF1-206	ENST00000413725	TSGA10	Q9BZW7	698 aa		13.63	□□□□□ -0.23
SF1-206	ENST00000413725	C8orf33	Q9H7E9	229 aa	Predicted RBP	13.63	□□□□□ -0.23
SF1-206	ENST00000413725	WNT16	Q9UBV4	365 aa		13.63	□□□□□ -0.23
SF1-206	ENST00000413725	XPO7	Q9UIA9	1087 aa	Known RBP	13.63	□□□□□ -0.23
SF1-206	ENST00000413725	ADGRG1	Q9Y653	693 aa		13.63	□□□□□ -0.23
SF1-206	ENST00000413725	TMEM110-MUSTN1	A8MSY1	372 aa		13.62	□□□□□ -0.23
SF1-206	ENST00000413725	HOXC11	O43248	304 aa	Predicted RBP	13.62	□□□□□ -0.23
SF1-206	ENST00000413725	LRCH4	O75427	683 aa		13.62	□□□□□ -0.23
SF1-206	ENST00000413725	ALAD	P13716	330 aa		13.62	□□□□□ -0.23
SF1-206	ENST00000413725	GLUL	P15104	373 aa		13.62	□□□□□ -0.23
SF1-206	ENST00000413725	TACR2	P21452	398 aa		13.62	□□□□□ -0.23
SF1-206	ENST00000413725	MIP	P30301	263 aa		13.62	□□□□□ -0.23
SF1-206	ENST00000413725	MAN1A1	P33908	653 aa		13.62	□□□□□ -0.23
SF1-206	ENST00000413725	ADRA1B	P35368	520 aa		13.62	□□□□□ -0.23
SF1-206	ENST00000413725	VCP	P55072	806 aa	Known RBP	13.62	□□□□□ -0.23
SF1-206	ENST00000413725	MLLT6	P55198	1093 aa	Predicted RBP	13.62	□□□□□ -0.23
SF1-206	ENST00000413725	NAP1L1	P55209	391 aa	Known RBP	13.62	□□□□□ -0.23
SF1-206	ENST00000413725	ZXDA	P98168	799 aa		13.62	□□□□□ -0.23
SF1-206	ENST00000413725	SCAP	Q12770	1279 aa		13.62	□□□□□ -0.23
SF1-206	ENST00000413725	MESD	Q14696	234 aa		13.62	□□□□□ -0.23
SF1-206	ENST00000413725	IFI16	Q16666	785 aa	Known RBP	13.62	□□□□□ -0.23
SF1-206	ENST00000413725	HADH	Q16836	314 aa	Known RBP	13.62	□□□□□ -0.23
SF1-206	ENST00000413725	MPPE1	Q53F39	396 aa		13.62	□□□□□ -0.23
SF1-206	ENST00000413725	RAB6C	Q53S08	254 aa		13.62	□□□□□ -0.23
SF1-206	ENST00000413725	FAM133B	Q5BKY9	247 aa	Known RBP	13.62	□□□□□ -0.23
SF1-206	ENST00000413725	MS4A13	Q5J8X5	152 aa		13.62	□□□□□ -0.23
SF1-206	ENST00000413725	EFHC2	Q5JST6	749 aa		13.62	□□□□□ -0.23
SF1-206	ENST00000413725	RABGAP1L	Q5R372	815 aa		13.62	□□□□□ -0.23
SF1-206	ENST00000413725	PIK3R6	Q5UE93	754 aa		13.62	□□□□□ -0.23
SF1-206	ENST00000413725	RAP1GAP2	Q684P5	730 aa		13.62	□□□□□ -0.23
SF1-206	ENST00000413725	NADSYN1	Q6IA69	706 aa		13.62	□□□□□ -0.23
SF1-206	ENST00000413725	C1orf228	Q6PIY5	440 aa		13.62	□□□□□ -0.23
SF1-206	ENST00000413725	RHBDF2	Q6PJF5	856 aa		13.62	□□□□□ -0.23
SF1-206	ENST00000413725	TPGS1	Q6ZTW0	290 aa		13.62	□□□□□ -0.23
SF1-206	ENST00000413725	SLFN11	Q7Z7L1	901 aa		13.62	□□□□□ -0.23
SF1-206	ENST00000413725	TMEM25	Q86YD3	366 aa		13.62	□□□□□ -0.23
SF1-206	ENST00000413725	TTC8	Q8TAM2	541 aa		13.62	□□□□□ -0.23
SF1-206	ENST00000413725	DDI1	Q8WTU0	396 aa		13.62	□□□□□ -0.23
SF1-206	ENST00000413725	EXOC4	Q96A65	974 aa		13.62	□□□□□ -0.23
SF1-206	ENST00000413725	BBS2	Q9BXC9	721 aa		13.62	□□□□□ -0.23
SF1-206	ENST00000413725	SIK2	Q9H0K1	926 aa		13.62	□□□□□ -0.23
SF1-206	ENST00000413725	RAB6C	Q9H0N0	254 aa		13.62	□□□□□ -0.23
SF1-206	ENST00000413725	HEBP1	Q9NRV9	189 aa		13.62	□□□□□ -0.23
SF1-206	ENST00000413725	MARK1	Q9P0L2	795 aa		13.62	□□□□□ -0.23
SF1-206	ENST00000413725	TFR2	Q9UP52	801 aa		13.62	□□□□□ -0.23
SF1-206	ENST00000413725	PIAS3	Q9Y6X2	628 aa		13.62	□□□□□ -0.23
SF1-206	ENST00000413725	GOLGA6L7	A0A1B0GV03	622 aa		13.61	□□□□□ -0.23
SF1-206	ENST00000413725	RCCD1	A6NED2	376 aa		13.61	□□□□□ -0.23
SF1-206	ENST00000413725	NEDD8-MDP1	E9PL57	170 aa		13.61	□□□□□ -0.23
SF1-206	ENST00000413725	TRDMT1	O14717	391 aa	Known RBP	13.61	□□□□□ -0.23
SF1-206	ENST00000413725	TSPAN3	O60637	253 aa		13.61	□□□□□ -0.23
SF1-206	ENST00000413725	SLC6A4	P31645	630 aa		13.61	□□□□□ -0.23
SF1-206	ENST00000413725	SSR1	P43307	286 aa	Known RBP	13.61	□□□□□ -0.23
SF1-206	ENST00000413725	AUH	Q13825	339 aa	Known RBP	13.61	□□□□□ -0.23
SF1-206	ENST00000413725	MLF2	Q15773	248 aa	Predicted RBP	13.61	□□□□□ -0.23
SF1-206	ENST00000413725	SLC44A4	Q53GD3	710 aa		13.61	□□□□□ -0.23
SF1-206	ENST00000413725	TTC39B	Q5VTQ0	682 aa	Predicted RBP	13.61	□□□□□ -0.23
SF1-206	ENST00000413725	RFWD3	Q6PCD5	774 aa		13.61	□□□□□ -0.23
SF1-206	ENST00000413725	LRRC31	Q6UY01	552 aa		13.61	□□□□□ -0.23
SF1-206	ENST00000413725	RALGPS2	Q86X27	583 aa	Predicted RBP	13.61	□□□□□ -0.23
SF1-206	ENST00000413725	LGI2	Q8N0V4	545 aa		13.61	□□□□□ -0.23
SF1-206	ENST00000413725	CCDC185	Q8N715	623 aa		13.61	□□□□□ -0.23
SF1-206	ENST00000413725	HJURP	Q8NCD3	748 aa	Predicted RBP	13.61	□□□□□ -0.23
SF1-206	ENST00000413725	TMA16	Q96EY4	203 aa	Known RBP	13.61	□□□□□ -0.23
SF1-206	ENST00000413725	SHD	Q96IW2	340 aa		13.61	□□□□□ -0.23
SF1-206	ENST00000413725	C1orf74	Q96LT6	269 aa		13.61	□□□□□ -0.23
SF1-206	ENST00000413725	XPO6	Q96QU8	1125 aa	Known RBP	13.61	□□□□□ -0.23
SF1-206	ENST00000413725	PRMT1	Q99873	361 aa	Known RBP	13.61	□□□□□ -0.23
SF1-206	ENST00000413725	LACRT	Q9GZZ8	138 aa		13.61	□□□□□ -0.23
SF1-206	ENST00000413725	ANLN	Q9NQW6	1124 aa		13.61	□□□□□ -0.23
SF1-206	ENST00000413725	ARHGEF3	Q9NR81	526 aa		13.61	□□□□□ -0.23
SF1-206	ENST00000413725	PCSK1N	Q9UHG2	260 aa		13.61	□□□□□ -0.23
SF1-206	ENST00000413725	CA14	Q9ULX7	337 aa		13.61	□□□□□ -0.23
SF1-206	ENST00000413725	USP18	Q9UMW8	372 aa		13.61	□□□□□ -0.23
SF1-206	ENST00000413725	HS3ST4	Q9Y661	456 aa		13.61	□□□□□ -0.23
SF1-206	ENST00000413725	SHROOM3	Q8TF72	1996 aa		13.61	□□□□□ -0.23
SF1-206	ENST00000413725	OTOL1	A6NHN0	477 aa	Predicted RBP	13.6	□□□□□ -0.23
SF1-206	ENST00000413725	SPECC1L-ADORA2A	F8WAN1	911 aa		13.6	□□□□□ -0.23
SF1-206	ENST00000413725	MAN2B1	O00754	1011 aa		13.6	□□□□□ -0.23
SF1-206	ENST00000413725	KRT86	O43790	486 aa		13.6	□□□□□ -0.23
SF1-206	ENST00000413725	TYR	P14679	529 aa		13.6	□□□□□ -0.23
SF1-206	ENST00000413725	CTH	P32929	405 aa		13.6	□□□□□ -0.23
SF1-206	ENST00000413725	GJA4	P35212	333 aa		13.6	□□□□□ -0.23
SF1-206	ENST00000413725	SLC1A1	P43005	524 aa		13.6	□□□□□ -0.23
SF1-206	ENST00000413725	PRKCQ	Q04759	706 aa		13.6	□□□□□ -0.23
SF1-206	ENST00000413725	SIGLEC14	Q08ET2	396 aa		13.6	□□□□□ -0.23
SF1-206	ENST00000413725	BOLA3	Q53S33	107 aa		13.6	□□□□□ -0.23
SF1-206	ENST00000413725	MPP7	Q5T2T1	576 aa		13.6	□□□□□ -0.23
SF1-206	ENST00000413725	ERMARD	Q5T6L9	678 aa		13.6	□□□□□ -0.23
SF1-206	ENST00000413725	DAB2IP	Q5VWQ8	1189 aa		13.6	□□□□□ -0.23
SF1-206	ENST00000413725	TPRG1	Q6ZUI0	275 aa		13.6	□□□□□ -0.23
SF1-206	ENST00000413725	PSTK	Q8IV42	348 aa	Known RBP	13.6	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms