RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 TRIM66O15016 1216 aa14.6□□□□□ -0.07
PCDHA11-201ENST00000398640 YWHAQP27348 245 aa14.6□□□□□ -0.07
PCDHA11-201ENST00000398640 OR1E1P30953 314 aa14.6□□□□□ -0.07
PCDHA11-201ENST00000398640 ADIGQ0VDE8 80 aa14.6□□□□□ -0.07
PCDHA11-201ENST00000398640 TMC2Q8TDI7 906 aa14.6□□□□□ -0.07
PCDHA11-201ENST00000398640 CASKIN2Q8WXE0 1202 aa14.6□□□□□ -0.07
PCDHA11-201ENST00000398640 PIF1Q9H611 641 aa14.6□□□□□ -0.07
PCDHA11-201ENST00000398640 PADI4Q9UM07 663 aa14.6□□□□□ -0.07
PCDHA11-201ENST00000398640 MORC2Q9Y6X9 1032 aaPredicted RBP14.6□□□□□ -0.07
PCDHA11-201ENST00000398640 LACTBL1A8MY62 500 aa14.6□□□□□ -0.07
PCDHA11-201ENST00000398640 CXCL14O95715 111 aa14.6□□□□□ -0.07
PCDHA11-201ENST00000398640 HALP42357 657 aa14.6□□□□□ -0.07
PCDHA11-201ENST00000398640 TRIM69Q86WT6 500 aa14.6□□□□□ -0.07
PCDHA11-201ENST00000398640 ADAM32Q8TC27 787 aa14.6□□□□□ -0.07
PCDHA11-201ENST00000398640 CNBD2Q96M20 576 aa14.6□□□□□ -0.07
PCDHA11-201ENST00000398640 ZSWIM1Q9BR11 485 aa14.6□□□□□ -0.07
PCDHA11-201ENST00000398640 FOXP3Q9BZS1 431 aa14.6□□□□□ -0.07
PCDHA11-201ENST00000398640 USP18Q9UMW8 372 aa14.6□□□□□ -0.07
PCDHA11-201ENST00000398640 POLR2EP19388 210 aaKnown RBP14.6□□□□□ -0.07
PCDHA11-201ENST00000398640 OTUD4Q01804 1114 aaKnown RBP14.6□□□□□ -0.07
PCDHA11-201ENST00000398640 RUNX1T1Q06455 604 aa14.6□□□□□ -0.07
PCDHA11-201ENST00000398640 BST2Q10589 180 aaKnown RBP14.6□□□□□ -0.07
PCDHA11-201ENST00000398640 SHROOM1Q2M3G4 852 aaPredicted RBP14.6□□□□□ -0.07
PCDHA11-201ENST00000398640 PLPP4Q5VZY2 271 aa14.6□□□□□ -0.07
PCDHA11-201ENST00000398640 RINLQ6ZS11 566 aa14.6□□□□□ -0.07
PCDHA11-201ENST00000398640 KIAA2013Q8IYS2 634 aa14.6□□□□□ -0.07
PCDHA11-201ENST00000398640 NOA1Q8NC60 698 aaKnown RBP14.6□□□□□ -0.07
PCDHA11-201ENST00000398640 TLE6Q9H808 572 aa14.6□□□□□ -0.07
PCDHA11-201ENST00000398640 ATP13A1Q9HD20 1204 aa14.6□□□□□ -0.07
PCDHA11-201ENST00000398640 NUDT5Q9UKK9 219 aa14.6□□□□□ -0.07
PCDHA11-201ENST00000398640 RNF103O00237 685 aa14.6□□□□□ -0.07
PCDHA11-201ENST00000398640 F9P00740 461 aa14.6□□□□□ -0.07
PCDHA11-201ENST00000398640 JCHAINP01591 159 aa14.6□□□□□ -0.07
PCDHA11-201ENST00000398640 UBTFL6P0CB48 400 aaPredicted RBP14.6□□□□□ -0.07
PCDHA11-201ENST00000398640 TADA1Q96BN2 335 aa14.6□□□□□ -0.07
PCDHA11-201ENST00000398640 TMEM121Q9BTD3 319 aa14.6□□□□□ -0.07
PCDHA11-201ENST00000398640 ZDHHC6Q9H6R6 413 aa14.6□□□□□ -0.07
PCDHA11-201ENST00000398640 KCPQ6ZWJ8 1503 aa14.6□□□□□ -0.07
PCDHA11-201ENST00000398640 TARSP26639 723 aaKnown RBP14.6□□□□□ -0.07
PCDHA11-201ENST00000398640 CLK1P49759 484 aaKnown RBP14.6□□□□□ -0.07
PCDHA11-201ENST00000398640 TFDP3Q5H9I0 405 aa14.6□□□□□ -0.07
PCDHA11-201ENST00000398640 ILKAPQ9H0C8 392 aaPredicted RBP14.6□□□□□ -0.07
PCDHA11-201ENST00000398640 MAFO75444 373 aaPredicted RBP14.59□□□□□ -0.07
PCDHA11-201ENST00000398640 CRTAMO95727 393 aa14.59□□□□□ -0.07
PCDHA11-201ENST00000398640 SEC24CP53992 1094 aa14.59□□□□□ -0.07
PCDHA11-201ENST00000398640 NTRK3Q16288 839 aa14.59□□□□□ -0.07
PCDHA11-201ENST00000398640 PPP2R2DQ66LE6 453 aa14.59□□□□□ -0.07
PCDHA11-201ENST00000398640 C11orf63Q6NUN7 778 aa14.59□□□□□ -0.07
PCDHA11-201ENST00000398640 SH3BP5LQ7L8J4 393 aa14.59□□□□□ -0.07
PCDHA11-201ENST00000398640 ELOA2Q8IYF1 753 aaPredicted RBP14.59□□□□□ -0.07
PCDHA11-201ENST00000398640 TMEM245Q9H330 911 aa14.59□□□□□ -0.07
PCDHA11-201ENST00000398640 NMRK1Q9NWW6 199 aa14.59□□□□□ -0.07
PCDHA11-201ENST00000398640 UTP6Q9NYH9 597 aaKnown RBP14.59□□□□□ -0.07
PCDHA11-201ENST00000398640 SNX8Q9Y5X2 465 aa14.59□□□□□ -0.07
PCDHA11-201ENST00000398640 SMIM35A0A1B0GVV1 85 aa14.59□□□□□ -0.07
PCDHA11-201ENST00000398640 AGBL2Q5U5Z8 902 aa14.59□□□□□ -0.07
PCDHA11-201ENST00000398640 PSRC1Q6PGN9 363 aaPredicted RBP14.59□□□□□ -0.07
PCDHA11-201ENST00000398640 TRPM8Q7Z2W7 1104 aa14.59□□□□□ -0.07
PCDHA11-201ENST00000398640 CENPLQ8N0S6 344 aaPredicted RBP14.59□□□□□ -0.07
PCDHA11-201ENST00000398640 SUSD6Q92537 303 aa14.59□□□□□ -0.07
PCDHA11-201ENST00000398640 NDEL1Q9GZM8 345 aa14.59□□□□□ -0.07
PCDHA11-201ENST00000398640 ISCUQ9H1K1 167 aa14.59□□□□□ -0.07
PCDHA11-201ENST00000398640 NFKBIL1Q9UBC1 381 aaPredicted RBP14.59□□□□□ -0.07
PCDHA11-201ENST00000398640 SALL3Q9BXA9 1300 aa14.59□□□□□ -0.07
PCDHA11-201ENST00000398640 SMAPO00193 183 aa14.59□□□□□ -0.07
PCDHA11-201ENST00000398640 STRA8Q7Z7C7 330 aa14.59□□□□□ -0.07
PCDHA11-201ENST00000398640 SMARCD1Q96GM5 515 aa14.59□□□□□ -0.07
PCDHA11-201ENST00000398640 CCDC134Q9H6E4 229 aa14.59□□□□□ -0.07
PCDHA11-201ENST00000398640 PTPRHQ9HD43 1115 aa14.59□□□□□ -0.07
PCDHA11-201ENST00000398640 DMAP1Q9NPF5 467 aaPredicted RBP14.59□□□□□ -0.07
PCDHA11-201ENST00000398640 BLOC1S6Q9UL45 172 aa14.59□□□□□ -0.07
PCDHA11-201ENST00000398640 SDR42E2A6NKP2 422 aa14.59□□□□□ -0.07
PCDHA11-201ENST00000398640 AGGF1Q8N302 714 aaeCLIP14.59□□□□□ -0.07
PCDHA11-201ENST00000398640 ASAH2Q9NR71 780 aa14.59□□□□□ -0.07
PCDHA11-201ENST00000398640 CISHQ9NSE2 258 aa14.59□□□□□ -0.07
PCDHA11-201ENST00000398640 IMPAD1Q9NX62 359 aa14.59□□□□□ -0.07
PCDHA11-201ENST00000398640 MRPS23Q9Y3D9 190 aaKnown RBP14.59□□□□□ -0.07
PCDHA11-201ENST00000398640 KLRG2A4D1S0 409 aaPredicted RBP14.59□□□□□ -0.07
PCDHA11-201ENST00000398640 HNRNPRO43390 633 aaKnown RBP14.59□□□□□ -0.07
PCDHA11-201ENST00000398640 GSTM1P09488 218 aa14.59□□□□□ -0.07
PCDHA11-201ENST00000398640 CCDC130P13994 396 aa14.59□□□□□ -0.07
PCDHA11-201ENST00000398640 STIP1P31948 543 aaKnown RBP14.59□□□□□ -0.07
PCDHA11-201ENST00000398640 SERPINB8P50452 374 aa14.59□□□□□ -0.07
PCDHA11-201ENST00000398640 SYTL1Q8IYJ3 562 aa14.59□□□□□ -0.07
PCDHA11-201ENST00000398640 ZSWIM2Q8NEG5 633 aa14.59□□□□□ -0.07
PCDHA11-201ENST00000398640 ROPN1BQ9BZX4 212 aaPredicted RBP14.59□□□□□ -0.07
PCDHA11-201ENST00000398640 ROPN1Q9HAT0 212 aaPredicted RBP14.59□□□□□ -0.07
PCDHA11-201ENST00000398640 GTF3C4Q9UKN8 822 aa14.59□□□□□ -0.07
PCDHA11-201ENST00000398640 MGAT4DA6NG13 374 aa14.58□□□□□ -0.07
PCDHA11-201ENST00000398640 EIF3HO15372 352 aaKnown RBP eCLIP14.58□□□□□ -0.07
PCDHA11-201ENST00000398640 DEAF1O75398 565 aaPredicted RBP14.58□□□□□ -0.07
PCDHA11-201ENST00000398640 BDNFP23560 247 aa14.58□□□□□ -0.07
PCDHA11-201ENST00000398640 POU1F1P28069 291 aa14.58□□□□□ -0.07
PCDHA11-201ENST00000398640 CCR1P32246 355 aa14.58□□□□□ -0.07
PCDHA11-201ENST00000398640 BOP1Q14137 746 aaKnown RBP14.58□□□□□ -0.07
PCDHA11-201ENST00000398640 CSHL1Q14406 222 aa14.58□□□□□ -0.07
PCDHA11-201ENST00000398640 TMEM86AQ8N2M4 240 aa14.58□□□□□ -0.07
PCDHA11-201ENST00000398640 ANKRD49Q8WVL7 239 aa14.58□□□□□ -0.07
PCDHA11-201ENST00000398640 PPP1R14AQ96A00 147 aa14.58□□□□□ -0.07
PCDHA11-201ENST00000398640 TMEM134Q9H6X4 195 aa14.58□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms