RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 GFRA2O00451 464 aa13.12□□□□□ -0.31
SMN1-202ENST00000380707 SRFP11831 508 aa13.12□□□□□ -0.31
SMN1-202ENST00000380707 IL1R2P27930 398 aa13.12□□□□□ -0.31
SMN1-202ENST00000380707 GGCXP38435 758 aa13.12□□□□□ -0.31
SMN1-202ENST00000380707 NAP1L1P55209 391 aaKnown RBP13.12□□□□□ -0.31
SMN1-202ENST00000380707 MS4A13Q5J8X5 152 aa13.12□□□□□ -0.31
SMN1-202ENST00000380707 RAP1GAP2Q684P5 730 aa13.12□□□□□ -0.31
SMN1-202ENST00000380707 RFWD3Q6PCD5 774 aa13.12□□□□□ -0.31
SMN1-202ENST00000380707 TPGS1Q6ZTW0 290 aa13.12□□□□□ -0.31
SMN1-202ENST00000380707 SLFN11Q7Z7L1 901 aa13.12□□□□□ -0.31
SMN1-202ENST00000380707 TMEM25Q86YD3 366 aa13.12□□□□□ -0.31
SMN1-202ENST00000380707 TTC8Q8TAM2 541 aa13.12□□□□□ -0.31
SMN1-202ENST00000380707 ATP2A3Q93084 1043 aa13.12□□□□□ -0.31
SMN1-202ENST00000380707 MYEOVQ96EZ4 313 aa13.12□□□□□ -0.31
SMN1-202ENST00000380707 HAPLN3Q96S86 360 aa13.12□□□□□ -0.31
SMN1-202ENST00000380707 PRMT1Q99873 361 aaKnown RBP13.12□□□□□ -0.31
SMN1-202ENST00000380707 SIK2Q9H0K1 926 aa13.12□□□□□ -0.31
SMN1-202ENST00000380707 LZTFL1Q9NQ48 299 aa13.12□□□□□ -0.31
SMN1-202ENST00000380707 LCMT1Q9UIC8 334 aa13.12□□□□□ -0.31
SMN1-202ENST00000380707 MUTYHQ9UIF7 546 aa13.12□□□□□ -0.31
SMN1-202ENST00000380707 PYCARDQ9ULZ3 195 aa13.12□□□□□ -0.31
SMN1-202ENST00000380707 HYOU1Q9Y4L1 999 aa13.12□□□□□ -0.31
SMN1-202ENST00000380707 SNX10Q9Y5X0 201 aa13.12□□□□□ -0.31
SMN1-202ENST00000380707 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.12□□□□□ -0.31
SMN1-202ENST00000380707 KRT86O43790 486 aa13.11□□□□□ -0.31
SMN1-202ENST00000380707 PRPSAP2O60256 369 aa13.11□□□□□ -0.31
SMN1-202ENST00000380707 TSPAN3O60637 253 aa13.11□□□□□ -0.31
SMN1-202ENST00000380707 MOCS3O95396 460 aa13.11□□□□□ -0.31
SMN1-202ENST00000380707 CYP17A1P05093 508 aa13.11□□□□□ -0.31
SMN1-202ENST00000380707 MAN1A1P33908 653 aa13.11□□□□□ -0.31
SMN1-202ENST00000380707 CHKAP35790 457 aa13.11□□□□□ -0.31
SMN1-202ENST00000380707 SGSHP51688 502 aa13.11□□□□□ -0.31
SMN1-202ENST00000380707 MLLT6P55198 1093 aaPredicted RBP13.11□□□□□ -0.31
SMN1-202ENST00000380707 SLC25A11Q02978 314 aaKnown RBP13.11□□□□□ -0.31
SMN1-202ENST00000380707 SCAPQ12770 1279 aa13.11□□□□□ -0.31
SMN1-202ENST00000380707 RUNX3Q13761 415 aa13.11□□□□□ -0.31
SMN1-202ENST00000380707 DHCR24Q15392 516 aa13.11□□□□□ -0.31
SMN1-202ENST00000380707 ARL13BQ3SXY8 428 aa13.11□□□□□ -0.31
SMN1-202ENST00000380707 LY6G5CQ5SRR4 150 aa13.11□□□□□ -0.31
SMN1-202ENST00000380707 ARTNQ5T4W7 220 aa13.11□□□□□ -0.31
SMN1-202ENST00000380707 IER5LQ5T953 404 aa13.11□□□□□ -0.31
SMN1-202ENST00000380707 TXNRD3NBQ6F5E7 133 aa13.11□□□□□ -0.31
SMN1-202ENST00000380707 ZNF662Q6ZS27 426 aa13.11□□□□□ -0.31
SMN1-202ENST00000380707 C14orf80Q86SX3 495 aa13.11□□□□□ -0.31
SMN1-202ENST00000380707 PYROXD2Q8N2H3 581 aa13.11□□□□□ -0.31
SMN1-202ENST00000380707 CPXM2Q8N436 756 aa13.11□□□□□ -0.31
SMN1-202ENST00000380707 BHMTQ93088 406 aa13.11□□□□□ -0.31
SMN1-202ENST00000380707 NTAN1Q96AB6 310 aa13.11□□□□□ -0.31
SMN1-202ENST00000380707 C1orf74Q96LT6 269 aa13.11□□□□□ -0.31
SMN1-202ENST00000380707 TSGA10Q9BZW7 698 aa13.11□□□□□ -0.31
SMN1-202ENST00000380707 ECT2Q9H8V3 914 aa13.11□□□□□ -0.31
SMN1-202ENST00000380707 SLC2A4RGQ9NR83 387 aa13.11□□□□□ -0.31
SMN1-202ENST00000380707 SPHK2Q9NRA0 654 aa13.11□□□□□ -0.31
SMN1-202ENST00000380707 FZD10Q9ULW2 581 aa13.11□□□□□ -0.31
SMN1-202ENST00000380707 GUCA1BQ9UMX6 200 aa13.11□□□□□ -0.31
SMN1-202ENST00000380707 DUSP12Q9UNI6 340 aa13.11□□□□□ -0.31
SMN1-202ENST00000380707 ALG6Q9Y672 507 aa13.11□□□□□ -0.31
SMN1-202ENST00000380707 FAM72CH0Y354 149 aa13.1□□□□□ -0.31
SMN1-202ENST00000380707 NFATC1O95644 943 aa13.1□□□□□ -0.31
SMN1-202ENST00000380707 TACR2P21452 398 aa13.1□□□□□ -0.31
SMN1-202ENST00000380707 COMTP21964 271 aa13.1□□□□□ -0.31
SMN1-202ENST00000380707 SSR1P43307 286 aaKnown RBP13.1□□□□□ -0.31
SMN1-202ENST00000380707 TAS2R40P59535 323 aa13.1□□□□□ -0.31
SMN1-202ENST00000380707 MTA1Q13330 715 aa13.1□□□□□ -0.31
SMN1-202ENST00000380707 AUHQ13825 339 aaKnown RBP13.1□□□□□ -0.31
SMN1-202ENST00000380707 SMTNL2Q2TAL5 461 aa13.1□□□□□ -0.31
SMN1-202ENST00000380707 ITPRIPL2Q3MIP1 535 aa13.1□□□□□ -0.31
SMN1-202ENST00000380707 KCNT1Q5JUK3 1230 aa13.1□□□□□ -0.31
SMN1-202ENST00000380707 ERMARDQ5T6L9 678 aa13.1□□□□□ -0.31
SMN1-202ENST00000380707 FAM72AQ5TYM5 149 aa13.1□□□□□ -0.31
SMN1-202ENST00000380707 FAM72DQ6L9T8 149 aa13.1□□□□□ -0.31
SMN1-202ENST00000380707 C11orf63Q6NUN7 778 aa13.1□□□□□ -0.31
SMN1-202ENST00000380707 FBXL22Q6P050 247 aa13.1□□□□□ -0.31
SMN1-202ENST00000380707 DAAM2Q86T65 1068 aa13.1□□□□□ -0.31
SMN1-202ENST00000380707 CHSY1Q86X52 802 aa13.1□□□□□ -0.31
SMN1-202ENST00000380707 FAM72BQ86X60 149 aa13.1□□□□□ -0.31
SMN1-202ENST00000380707 REXO1L1PQ8IX06 675 aa13.1□□□□□ -0.31
SMN1-202ENST00000380707 RNF10Q8N5U6 811 aaKnown RBP13.1□□□□□ -0.31
SMN1-202ENST00000380707 LRRC57Q8N9N7 239 aa13.1□□□□□ -0.31
SMN1-202ENST00000380707 CALR3Q96L12 384 aaKnown RBP13.1□□□□□ -0.31
SMN1-202ENST00000380707 PRICKLE1Q96MT3 831 aaPredicted RBP13.1□□□□□ -0.31
SMN1-202ENST00000380707 NCAPGQ9BPX3 1015 aa13.1□□□□□ -0.31
SMN1-202ENST00000380707 OSBPL2Q9H1P3 480 aa13.1□□□□□ -0.31
SMN1-202ENST00000380707 ZWILCHQ9H900 591 aa13.1□□□□□ -0.31
SMN1-202ENST00000380707 TRPV5Q9NQA5 729 aa13.1□□□□□ -0.31
SMN1-202ENST00000380707 GPATCH2LQ9NWQ4 482 aa13.1□□□□□ -0.31
SMN1-202ENST00000380707 PLK2Q9NYY3 685 aa13.1□□□□□ -0.31
SMN1-202ENST00000380707 OR12D3Q9UGF7 316 aa13.1□□□□□ -0.31
SMN1-202ENST00000380707 GRID2IPA4D2P6 1211 aa13.09□□□□□ -0.31
SMN1-202ENST00000380707 RARAP10276 462 aa13.09□□□□□ -0.31
SMN1-202ENST00000380707 SLC1A1P43005 524 aa13.09□□□□□ -0.31
SMN1-202ENST00000380707 SOX9P48436 509 aa13.09□□□□□ -0.31
SMN1-202ENST00000380707 AIF1P55008 147 aa13.09□□□□□ -0.31
SMN1-202ENST00000380707 CA9Q16790 459 aa13.09□□□□□ -0.31
SMN1-202ENST00000380707 GAB4Q2WGN9 574 aa13.09□□□□□ -0.31
SMN1-202ENST00000380707 ANO4Q32M45 955 aa13.09□□□□□ -0.31
SMN1-202ENST00000380707 BOLA3Q53S33 107 aa13.09□□□□□ -0.31
SMN1-202ENST00000380707 EFHC2Q5JST6 749 aa13.09□□□□□ -0.31
SMN1-202ENST00000380707 FYB2Q5VWT5 728 aa13.09□□□□□ -0.31
SMN1-202ENST00000380707 ZNF683Q8IZ20 524 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms