RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 ZNF148Q9UQR1 794 aa25.39■■□□□ 1.66
ECHDC3-201ENST00000379215 RAD54BQ9Y620 910 aa25.39■■□□□ 1.66
ECHDC3-201ENST00000379215 I6L893 689 aaPredicted RBP25.38■■□□□ 1.65
ECHDC3-201ENST00000379215 FGF10O15520 208 aaPredicted RBP25.38■■□□□ 1.65
ECHDC3-201ENST00000379215 OAS1P00973 400 aaKnown RBP25.38■■□□□ 1.65
ECHDC3-201ENST00000379215 POU2F2P09086 479 aa25.38■■□□□ 1.65
ECHDC3-201ENST00000379215 CUL1Q13616 776 aa25.38■■□□□ 1.65
ECHDC3-201ENST00000379215 OASLQ15646 514 aaKnown RBP25.38■■□□□ 1.65
ECHDC3-201ENST00000379215 MAP9Q49MG5 647 aa25.38■■□□□ 1.65
ECHDC3-201ENST00000379215 TDHQ8IZJ6 230 aa25.38■■□□□ 1.65
ECHDC3-201ENST00000379215 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP25.38■■□□□ 1.65
ECHDC3-201ENST00000379215 MRPS31Q92665 395 aaKnown RBP25.38■■□□□ 1.65
ECHDC3-201ENST00000379215 ERP44Q9BS26 406 aa25.38■■□□□ 1.65
ECHDC3-201ENST00000379215 COCHO43405 550 aa25.37■■□□□ 1.65
ECHDC3-201ENST00000379215 XYLBO75191 536 aa25.37■■□□□ 1.65
ECHDC3-201ENST00000379215 SERPINB6P35237 376 aa25.37■■□□□ 1.65
ECHDC3-201ENST00000379215 KCNJ1P48048 391 aa25.37■■□□□ 1.65
ECHDC3-201ENST00000379215 EIF3EP60228 445 aaKnown RBP25.37■■□□□ 1.65
ECHDC3-201ENST00000379215 XRCC4Q13426 336 aa25.37■■□□□ 1.65
ECHDC3-201ENST00000379215 GSTA5Q7RTV2 222 aa25.37■■□□□ 1.65
ECHDC3-201ENST00000379215 SLC22A17Q8WUG5 538 aa25.37■■□□□ 1.65
ECHDC3-201ENST00000379215 SEC14L1Q92503 715 aa25.37■■□□□ 1.65
ECHDC3-201ENST00000379215 IL21Q9HBE4 155 aa25.37■■□□□ 1.65
ECHDC3-201ENST00000379215 EPB41L5Q9HCM4 733 aa25.37■■□□□ 1.65
ECHDC3-201ENST00000379215 FAM114A2Q9NRY5 505 aa25.37■■□□□ 1.65
ECHDC3-201ENST00000379215 ZDHHC7Q9NXF8 308 aa25.37■■□□□ 1.65
ECHDC3-201ENST00000379215 DONSONQ9NYP3 566 aa25.37■■□□□ 1.65
ECHDC3-201ENST00000379215 CFAP69A5D8W1 941 aa25.37■■□□□ 1.65
ECHDC3-201ENST00000379215 LRIG2O94898 1065 aa25.37■■□□□ 1.65
ECHDC3-201ENST00000379215 PECAM1P16284 738 aaPredicted RBP25.37■■□□□ 1.65
ECHDC3-201ENST00000379215 AMPD1P23109 780 aa25.37■■□□□ 1.65
ECHDC3-201ENST00000379215 DRG2P55039 364 aaKnown RBP25.37■■□□□ 1.65
ECHDC3-201ENST00000379215 VSNL1P62760 191 aa25.37■■□□□ 1.65
ECHDC3-201ENST00000379215 MRPS25P82663 173 aaKnown RBP25.37■■□□□ 1.65
ECHDC3-201ENST00000379215 NCBP2-AS2Q69YL0 99 aa25.37■■□□□ 1.65
ECHDC3-201ENST00000379215 TMCO3Q6UWJ1 677 aa25.37■■□□□ 1.65
ECHDC3-201ENST00000379215 TMC8Q8IU68 726 aa25.37■■□□□ 1.65
ECHDC3-201ENST00000379215 CCDC89Q8N998 374 aa25.37■■□□□ 1.65
ECHDC3-201ENST00000379215 ARNTL2Q8WYA1 636 aa25.37■■□□□ 1.65
ECHDC3-201ENST00000379215 TBC1D31Q96DN5 1066 aa25.37■■□□□ 1.65
ECHDC3-201ENST00000379215 MAGEB5Q9BZ81 275 aa25.37■■□□□ 1.65
ECHDC3-201ENST00000379215 CATSPERBQ9H7T0 1116 aa25.37■■□□□ 1.65
ECHDC3-201ENST00000379215 ZNF334Q9HCZ1 680 aaPredicted RBP25.37■■□□□ 1.65
ECHDC3-201ENST00000379215 MOCS2O96007 188 aaPredicted RBP25.36■■□□□ 1.65
ECHDC3-201ENST00000379215 H2AFXP16104 143 aaPredicted RBP25.36■■□□□ 1.65
ECHDC3-201ENST00000379215 GABRR2P28476 465 aa25.36■■□□□ 1.65
ECHDC3-201ENST00000379215 EPHB2P29323 1055 aa25.36■■□□□ 1.65
ECHDC3-201ENST00000379215 HOXC13P31276 330 aa25.36■■□□□ 1.65
ECHDC3-201ENST00000379215 HARS2P49590 506 aaKnown RBP25.36■■□□□ 1.65
ECHDC3-201ENST00000379215 MLLT6P55198 1093 aaPredicted RBP25.36■■□□□ 1.65
ECHDC3-201ENST00000379215 PTK6Q13882 451 aa25.36■■□□□ 1.65
ECHDC3-201ENST00000379215 PAFAH1B3Q15102 231 aaKnown RBP25.36■■□□□ 1.65
ECHDC3-201ENST00000379215 C1orf228Q6PIY5 440 aa25.36■■□□□ 1.65
ECHDC3-201ENST00000379215 LRRC31Q6UY01 552 aa25.36■■□□□ 1.65
ECHDC3-201ENST00000379215 TMEM150AQ86TG1 271 aa25.36■■□□□ 1.65
ECHDC3-201ENST00000379215 ALLCQ8N6M5 410 aa25.36■■□□□ 1.65
ECHDC3-201ENST00000379215 PPP2R3CQ969Q6 453 aa25.36■■□□□ 1.65
ECHDC3-201ENST00000379215 CDCA3Q99618 268 aaPredicted RBP25.36■■□□□ 1.65
ECHDC3-201ENST00000379215 FAM129AQ9BZQ8 928 aa25.36■■□□□ 1.65
ECHDC3-201ENST00000379215 SIK2Q9H0K1 926 aa25.36■■□□□ 1.65
ECHDC3-201ENST00000379215 HEY1Q9Y5J3 304 aa25.36■■□□□ 1.65
ECHDC3-201ENST00000379215 HS3ST4Q9Y661 456 aa25.36■■□□□ 1.65
ECHDC3-201ENST00000379215 BHMG1C9JSJ3 638 aaPredicted RBP25.35■■□□□ 1.65
ECHDC3-201ENST00000379215 FAM72CH0Y354 149 aa25.35■■□□□ 1.65
ECHDC3-201ENST00000379215 DCLK1O15075 740 aa25.35■■□□□ 1.65
ECHDC3-201ENST00000379215 RBP3P10745 1247 aa25.35■■□□□ 1.65
ECHDC3-201ENST00000379215 STIP1P31948 543 aaKnown RBP25.35■■□□□ 1.65
ECHDC3-201ENST00000379215 FAM72AQ5TYM5 149 aa25.35■■□□□ 1.65
ECHDC3-201ENST00000379215 MANEALQ5VSG8 457 aa25.35■■□□□ 1.65
ECHDC3-201ENST00000379215 FAM72DQ6L9T8 149 aa25.35■■□□□ 1.65
ECHDC3-201ENST00000379215 FAM72BQ86X60 149 aa25.35■■□□□ 1.65
ECHDC3-201ENST00000379215 CDKL3Q8IVW4 592 aaPredicted RBP25.35■■□□□ 1.65
ECHDC3-201ENST00000379215 AZIN2Q96A70 460 aa25.35■■□□□ 1.65
ECHDC3-201ENST00000379215 FAM118BQ9BPY3 351 aa25.35■■□□□ 1.65
ECHDC3-201ENST00000379215 LRRC3Q9BY71 257 aa25.35■■□□□ 1.65
ECHDC3-201ENST00000379215 SAE1Q9UBE0 346 aaPredicted RBP25.35■■□□□ 1.65
ECHDC3-201ENST00000379215 HACD1B0YJ81 288 aa25.34■■□□□ 1.65
ECHDC3-201ENST00000379215 NDC80O14777 642 aa25.34■■□□□ 1.65
ECHDC3-201ENST00000379215 NCAM2O15394 837 aa25.34■■□□□ 1.65
ECHDC3-201ENST00000379215 ERCC2P18074 760 aa25.34■■□□□ 1.65
ECHDC3-201ENST00000379215 EPHA5P54756 1037 aa25.34■■□□□ 1.65
ECHDC3-201ENST00000379215 DUPD1Q68J44 220 aa25.34■■□□□ 1.65
ECHDC3-201ENST00000379215 HNRNPLLQ8WVV9 542 aaKnown RBP25.34■■□□□ 1.65
ECHDC3-201ENST00000379215 RSAD2Q8WXG1 361 aa25.34■■□□□ 1.65
ECHDC3-201ENST00000379215 FERMT1Q9BQL6 677 aa25.34■■□□□ 1.65
ECHDC3-201ENST00000379215 TRIM51Q9BSJ1 452 aa25.34■■□□□ 1.65
ECHDC3-201ENST00000379215 SOBPA7XYQ1 873 aa25.34■■□□□ 1.65
ECHDC3-201ENST00000379215 CCL16O15467 120 aa25.34■■□□□ 1.65
ECHDC3-201ENST00000379215 OLFM2O95897 454 aa25.34■■□□□ 1.65
ECHDC3-201ENST00000379215 PTPN2P17706 415 aa25.34■■□□□ 1.65
ECHDC3-201ENST00000379215 DDX6P26196 483 aaKnown RBP eCLIP25.34■■□□□ 1.65
ECHDC3-201ENST00000379215 SLC11A2P49281 568 aa25.34■■□□□ 1.65
ECHDC3-201ENST00000379215 CCNI2Q6ZMN8 369 aaPredicted RBP25.34■■□□□ 1.65
ECHDC3-201ENST00000379215 LZTR1Q8N653 840 aa25.34■■□□□ 1.65
ECHDC3-201ENST00000379215 CORO1BQ9BR76 489 aa25.34■■□□□ 1.65
ECHDC3-201ENST00000379215 TLE6Q9H808 572 aa25.34■■□□□ 1.65
ECHDC3-201ENST00000379215 CERS4Q9HA82 394 aa25.34■■□□□ 1.65
ECHDC3-201ENST00000379215 PPARGC1AQ9UBK2 798 aaKnown RBP25.34■■□□□ 1.65
ECHDC3-201ENST00000379215 E9PAM4 449 aa25.33■■□□□ 1.65
ECHDC3-201ENST00000379215 H7C0C1 242 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 716.6 ms