RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 SLC22A17Q8WUG5 538 aa14.8□□□□□ -0.04
HMGA1-203ENST00000374116 MYLPFQ96A32 169 aa14.8□□□□□ -0.04
HMGA1-203ENST00000374116 PCED1BQ96HM7 432 aa14.8□□□□□ -0.04
HMGA1-203ENST00000374116 HEXIM2Q96MH2 286 aaKnown RBP14.8□□□□□ -0.04
HMGA1-203ENST00000374116 ZNF570Q96NI8 536 aa14.8□□□□□ -0.04
HMGA1-203ENST00000374116 PKMYT1Q99640 499 aa14.8□□□□□ -0.04
HMGA1-203ENST00000374116 NT5C1AQ9BXI3 368 aa14.8□□□□□ -0.04
HMGA1-203ENST00000374116 FOXP3Q9BZS1 431 aa14.8□□□□□ -0.04
HMGA1-203ENST00000374116 CCDC134Q9H6E4 229 aa14.8□□□□□ -0.04
HMGA1-203ENST00000374116 CDH9Q9ULB4 789 aa14.8□□□□□ -0.04
HMGA1-203ENST00000374116 KIAA1257Q9ULG3 409 aa14.8□□□□□ -0.04
HMGA1-203ENST00000374116 LIASO43766 372 aa14.79□□□□□ -0.04
HMGA1-203ENST00000374116 MICAL2O94851 1124 aa14.79□□□□□ -0.04
HMGA1-203ENST00000374116 ABLIM3O94929 683 aa14.79□□□□□ -0.04
HMGA1-203ENST00000374116 TCF4P15884 667 aa14.79□□□□□ -0.04
HMGA1-203ENST00000374116 ADORA2BP29275 332 aa14.79□□□□□ -0.04
HMGA1-203ENST00000374116 MMP13P45452 471 aa14.79□□□□□ -0.04
HMGA1-203ENST00000374116 GPR17Q13304 367 aa14.79□□□□□ -0.04
HMGA1-203ENST00000374116 ATP13A4Q4VNC1 1196 aa14.79□□□□□ -0.04
HMGA1-203ENST00000374116 CCDC38Q502W7 563 aa14.79□□□□□ -0.04
HMGA1-203ENST00000374116 CYP4A22Q5TCH4 519 aa14.79□□□□□ -0.04
HMGA1-203ENST00000374116 MFSD7Q6UXD7 560 aa14.79□□□□□ -0.04
HMGA1-203ENST00000374116 GSTA5Q7RTV2 222 aa14.79□□□□□ -0.04
HMGA1-203ENST00000374116 PIGWQ7Z7B1 504 aa14.79□□□□□ -0.04
HMGA1-203ENST00000374116 XYLT1Q86Y38 959 aa14.79□□□□□ -0.04
HMGA1-203ENST00000374116 MFN1Q8IWA4 741 aa14.79□□□□□ -0.04
HMGA1-203ENST00000374116 ANKS4BQ8N8V4 417 aa14.79□□□□□ -0.04
HMGA1-203ENST00000374116 KREMEN2Q8NCW0 462 aa14.79□□□□□ -0.04
HMGA1-203ENST00000374116 SLC7A14Q8TBB6 771 aa14.79□□□□□ -0.04
HMGA1-203ENST00000374116 CPXM1Q96SM3 734 aa14.79□□□□□ -0.04
HMGA1-203ENST00000374116 TMEM30AQ9NV96 361 aa14.79□□□□□ -0.04
HMGA1-203ENST00000374116 CPSF2Q9P2I0 782 aaKnown RBP14.79□□□□□ -0.04
HMGA1-203ENST00000374116 TJP2Q9UDY2 1190 aa14.79□□□□□ -0.04
HMGA1-203ENST00000374116 DRG1Q9Y295 367 aaKnown RBP14.79□□□□□ -0.04
HMGA1-203ENST00000374116 MTCL1Q9Y4B5 1905 aaKnown RBP14.78□□□□□ -0.04
HMGA1-203ENST00000374116 PI4K2BG5E9Z4 385 aa14.78□□□□□ -0.04
HMGA1-203ENST00000374116 H3BQ06 376 aaPredicted RBP14.78□□□□□ -0.04
HMGA1-203ENST00000374116 TBX10O75333 385 aa14.78□□□□□ -0.04
HMGA1-203ENST00000374116 TTC4O95801 387 aa14.78□□□□□ -0.04
HMGA1-203ENST00000374116 KRT3P12035 628 aa14.78□□□□□ -0.04
HMGA1-203ENST00000374116 BDNFP23560 247 aa14.78□□□□□ -0.04
HMGA1-203ENST00000374116 CHKAP35790 457 aa14.78□□□□□ -0.04
HMGA1-203ENST00000374116 RPS6KA3P51812 740 aa14.78□□□□□ -0.04
HMGA1-203ENST00000374116 CACNA2D1P54289 1103 aa14.78□□□□□ -0.04
HMGA1-203ENST00000374116 CREMQ03060 361 aa14.78□□□□□ -0.04
HMGA1-203ENST00000374116 AUHQ13825 339 aaKnown RBP14.78□□□□□ -0.04
HMGA1-203ENST00000374116 KCNC3Q14003 757 aa14.78□□□□□ -0.04
HMGA1-203ENST00000374116 TFDP3Q5H9I0 405 aa14.78□□□□□ -0.04
HMGA1-203ENST00000374116 PPP1R26Q5T8A7 1209 aaPredicted RBP14.78□□□□□ -0.04
HMGA1-203ENST00000374116 FAM171BQ6P995 826 aa14.78□□□□□ -0.04
HMGA1-203ENST00000374116 LCLAT1Q6UWP7 414 aa14.78□□□□□ -0.04
HMGA1-203ENST00000374116 RELL1Q8IUW5 271 aa14.78□□□□□ -0.04
HMGA1-203ENST00000374116 TEX9Q8N6V9 391 aa14.78□□□□□ -0.04
HMGA1-203ENST00000374116 EPS8L3Q8TE67 593 aaKnown RBP14.78□□□□□ -0.04
HMGA1-203ENST00000374116 PPP2R3CQ969Q6 453 aa14.78□□□□□ -0.04
HMGA1-203ENST00000374116 MCRS1Q96EZ8 462 aa14.78□□□□□ -0.04
HMGA1-203ENST00000374116 SERPINB12Q96P63 405 aa14.78□□□□□ -0.04
HMGA1-203ENST00000374116 ZNF317Q96PQ6 595 aaPredicted RBP14.78□□□□□ -0.04
HMGA1-203ENST00000374116 XPO6Q96QU8 1125 aaKnown RBP14.78□□□□□ -0.04
HMGA1-203ENST00000374116 SEPT5Q99719 369 aaPredicted RBP14.78□□□□□ -0.04
HMGA1-203ENST00000374116 B3GNT5Q9BYG0 378 aa14.78□□□□□ -0.04
HMGA1-203ENST00000374116 KLHL11Q9NVR0 708 aa14.78□□□□□ -0.04
HMGA1-203ENST00000374116 EFR3BQ9Y2G0 817 aa14.78□□□□□ -0.04
HMGA1-203ENST00000374116 hCG_1818297A0A087WSY0 165 aa14.78□□□□□ -0.04
HMGA1-203ENST00000374116 SMIM23A6NLE4 172 aa14.78□□□□□ -0.04
HMGA1-203ENST00000374116 PRRG1O14668 218 aa14.78□□□□□ -0.04
HMGA1-203ENST00000374116 NDC80O14777 642 aa14.78□□□□□ -0.04
HMGA1-203ENST00000374116 ERBB2P04626 1255 aa14.78□□□□□ -0.04
HMGA1-203ENST00000374116 KRT10P13645 584 aa14.78□□□□□ -0.04
HMGA1-203ENST00000374116 PSMA2P25787 234 aa14.78□□□□□ -0.04
HMGA1-203ENST00000374116 RFC1P35251 1148 aaPredicted RBP14.78□□□□□ -0.04
HMGA1-203ENST00000374116 LTBRP36941 435 aa14.78□□□□□ -0.04
HMGA1-203ENST00000374116 ADAM15Q13444 863 aa14.78□□□□□ -0.04
HMGA1-203ENST00000374116 MGAT5BQ3V5L5 792 aa14.78□□□□□ -0.04
HMGA1-203ENST00000374116 UBAP2Q5T6F2 1119 aaKnown RBP14.78□□□□□ -0.04
HMGA1-203ENST00000374116 IZUMO3Q5VZ72 239 aa14.78□□□□□ -0.04
HMGA1-203ENST00000374116 KAZNQ674X7 775 aa14.78□□□□□ -0.04
HMGA1-203ENST00000374116 TAOK1Q7L7X3 1001 aa14.78□□□□□ -0.04
HMGA1-203ENST00000374116 CPLX4Q7Z7G2 160 aa14.78□□□□□ -0.04
HMGA1-203ENST00000374116 SPATA2LQ8IUW3 424 aaPredicted RBP14.78□□□□□ -0.04
HMGA1-203ENST00000374116 GPR65Q8IYL9 337 aa14.78□□□□□ -0.04
HMGA1-203ENST00000374116 DCP1BQ8IZD4 617 aaKnown RBP14.78□□□□□ -0.04
HMGA1-203ENST00000374116 ARFGAP1Q8N6T3 406 aa14.78□□□□□ -0.04
HMGA1-203ENST00000374116 EFHBQ8N7U6 833 aa14.78□□□□□ -0.04
HMGA1-203ENST00000374116 UHMK1Q8TAS1 419 aaKnown RBP14.78□□□□□ -0.04
HMGA1-203ENST00000374116 SLC2A14Q8TDB8 520 aa14.78□□□□□ -0.04
HMGA1-203ENST00000374116 MED10Q9BTT4 135 aa14.78□□□□□ -0.04
HMGA1-203ENST00000374116 DDX23Q9BUQ8 820 aaKnown RBP14.78□□□□□ -0.04
HMGA1-203ENST00000374116 CLEC1BQ9P126 229 aa14.78□□□□□ -0.04
HMGA1-203ENST00000374116 FBXW11Q9UKB1 542 aa14.78□□□□□ -0.04
HMGA1-203ENST00000374116 SKAP2O75563 359 aaPredicted RBP14.77□□□□□ -0.05
HMGA1-203ENST00000374116 TCEA3O75764 348 aa14.77□□□□□ -0.05
HMGA1-203ENST00000374116 WFS1O76024 890 aa14.77□□□□□ -0.05
HMGA1-203ENST00000374116 BEST1O76090 585 aa14.77□□□□□ -0.05
HMGA1-203ENST00000374116 C8AP07357 584 aa14.77□□□□□ -0.05
HMGA1-203ENST00000374116 KRT7P08729 469 aa14.77□□□□□ -0.05
HMGA1-203ENST00000374116 ATP5DP30049 168 aa14.77□□□□□ -0.05
HMGA1-203ENST00000374116 CDKN2BP42772 138 aa14.77□□□□□ -0.05
HMGA1-203ENST00000374116 IFI35P80217 286 aaPredicted RBP14.77□□□□□ -0.05
HMGA1-203ENST00000374116 DDR2Q16832 855 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms