RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 RGS18Q9NS28 235 aa17.23■□□□□ 0.35
SAMM50-201ENST00000350028 DDIT4Q9NX09 232 aa17.23■□□□□ 0.35
SAMM50-201ENST00000350028 TTLL3Q9Y4R7 772 aa17.23■□□□□ 0.35
SAMM50-201ENST00000350028 MOXD2PA6NHM9 499 aa17.22■□□□□ 0.35
SAMM50-201ENST00000350028 SUN1O94901 812 aa17.22■□□□□ 0.35
SAMM50-201ENST00000350028 EOMESO95936 686 aa17.22■□□□□ 0.35
SAMM50-201ENST00000350028 MT-ND3P03897 115 aa17.22■□□□□ 0.35
SAMM50-201ENST00000350028 BDNFP23560 247 aa17.22■□□□□ 0.35
SAMM50-201ENST00000350028 PRKCHP24723 683 aa17.22■□□□□ 0.35
SAMM50-201ENST00000350028 FOXN2P32314 431 aa17.22■□□□□ 0.35
SAMM50-201ENST00000350028 RPA3P35244 121 aaPredicted RBP17.22■□□□□ 0.35
SAMM50-201ENST00000350028 CXCR3P49682 368 aa17.22■□□□□ 0.35
SAMM50-201ENST00000350028 TSPY1Q01534 308 aa17.22■□□□□ 0.35
SAMM50-201ENST00000350028 PAN2Q504Q3 1202 aaKnown RBP17.22■□□□□ 0.35
SAMM50-201ENST00000350028 HHATQ5VTY9 493 aa17.22■□□□□ 0.35
SAMM50-201ENST00000350028 ZNF534Q76KX8 674 aa17.22■□□□□ 0.35
SAMM50-201ENST00000350028 SLC26A11Q86WA9 606 aa17.22■□□□□ 0.35
SAMM50-201ENST00000350028 MICALL1Q8N3F8 863 aa17.22■□□□□ 0.35
SAMM50-201ENST00000350028 CCDC33Q8N5R6 958 aa17.22■□□□□ 0.35
SAMM50-201ENST00000350028 COLGALT1Q8NBJ5 622 aa17.22■□□□□ 0.35
SAMM50-201ENST00000350028 P2RY11Q96G91 374 aa17.22■□□□□ 0.35
SAMM50-201ENST00000350028 GLT1D1Q96MS3 346 aa17.22■□□□□ 0.35
SAMM50-201ENST00000350028 LGMNQ99538 433 aa17.22■□□□□ 0.35
SAMM50-201ENST00000350028 EBNA1BP2Q99848 306 aaKnown RBP17.22■□□□□ 0.35
SAMM50-201ENST00000350028 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.22■□□□□ 0.35
SAMM50-201ENST00000350028 PCDHB8Q9UN66 801 aa17.22■□□□□ 0.35
SAMM50-201ENST00000350028 BRCA2P51587 3418 aa17.22■□□□□ 0.35
SAMM50-201ENST00000350028 TM9SF1O15321 606 aa17.21■□□□□ 0.35
SAMM50-201ENST00000350028 NCAM2O15394 837 aa17.21■□□□□ 0.35
SAMM50-201ENST00000350028 ERCC2P18074 760 aa17.21■□□□□ 0.35
SAMM50-201ENST00000350028 TPI1P60174 286 aa17.21■□□□□ 0.35
SAMM50-201ENST00000350028 ACTN3Q08043 901 aaPredicted RBP17.21■□□□□ 0.35
SAMM50-201ENST00000350028 AP1B1Q10567 949 aa17.21■□□□□ 0.35
SAMM50-201ENST00000350028 PDK4Q16654 411 aa17.21■□□□□ 0.35
SAMM50-201ENST00000350028 PARP6Q2NL67 630 aa17.21■□□□□ 0.35
SAMM50-201ENST00000350028 LGSNQ5TDP6 509 aa17.21■□□□□ 0.35
SAMM50-201ENST00000350028 SPATA21Q7Z572 469 aa17.21■□□□□ 0.35
SAMM50-201ENST00000350028 DNAJC5GQ8N7S2 189 aa17.21■□□□□ 0.35
SAMM50-201ENST00000350028 TSEN34Q9BSV6 310 aaKnown RBP17.21■□□□□ 0.35
SAMM50-201ENST00000350028 COLEC11Q9BWP8 271 aa17.21■□□□□ 0.35
SAMM50-201ENST00000350028 BRD8Q9H0E9 1235 aa17.21■□□□□ 0.35
SAMM50-201ENST00000350028 PRDM12Q9H4Q4 367 aa17.21■□□□□ 0.35
SAMM50-201ENST00000350028 TMLHEQ9NVH6 421 aa17.21■□□□□ 0.35
SAMM50-201ENST00000350028 ZNF180Q9UJW8 692 aa17.21■□□□□ 0.35
SAMM50-201ENST00000350028 RNF103O00237 685 aa17.21■□□□□ 0.35
SAMM50-201ENST00000350028 APOEP02649 317 aa17.21■□□□□ 0.35
SAMM50-201ENST00000350028 C1QAP02745 245 aa17.21■□□□□ 0.35
SAMM50-201ENST00000350028 CKBP12277 381 aa17.21■□□□□ 0.35
SAMM50-201ENST00000350028 MTFR1Q15390 333 aa17.21■□□□□ 0.35
SAMM50-201ENST00000350028 SLC1A5Q15758 541 aa17.21■□□□□ 0.35
SAMM50-201ENST00000350028 FAM182AQ5T1J6 154 aa17.21■□□□□ 0.35
SAMM50-201ENST00000350028 TTC39BQ5VTQ0 682 aaPredicted RBP17.21■□□□□ 0.35
SAMM50-201ENST00000350028 BSPRYQ5W0U4 402 aa17.21■□□□□ 0.35
SAMM50-201ENST00000350028 GLB1LQ6UWU2 654 aa17.21■□□□□ 0.35
SAMM50-201ENST00000350028 DENND5BQ6ZUT9 1274 aa17.21■□□□□ 0.35
SAMM50-201ENST00000350028 LRRC6Q86X45 466 aa17.21■□□□□ 0.35
SAMM50-201ENST00000350028 BANPQ8N9N5 519 aa17.21■□□□□ 0.35
SAMM50-201ENST00000350028 CCNYQ8ND76 341 aa17.21■□□□□ 0.35
SAMM50-201ENST00000350028 ADAM32Q8TC27 787 aa17.21■□□□□ 0.35
SAMM50-201ENST00000350028 APBB2Q92870 758 aa17.21■□□□□ 0.35
SAMM50-201ENST00000350028 RHOBTB2Q9BYZ6 727 aa17.21■□□□□ 0.35
SAMM50-201ENST00000350028 WDCPQ9H6R7 721 aa17.21■□□□□ 0.35
SAMM50-201ENST00000350028 FAM155BO75949 473 aa17.2■□□□□ 0.34
SAMM50-201ENST00000350028 FAAP100Q0VG06 881 aa17.2■□□□□ 0.34
SAMM50-201ENST00000350028 SEPT7Q16181 437 aaKnown RBP17.2■□□□□ 0.34
SAMM50-201ENST00000350028 LRRC8BQ6P9F7 803 aa17.2■□□□□ 0.34
SAMM50-201ENST00000350028 C4orf50Q6ZRC1 276 aa17.2■□□□□ 0.34
SAMM50-201ENST00000350028 CYS1Q717R9 158 aa17.2■□□□□ 0.34
SAMM50-201ENST00000350028 SLC24A5Q71RS6 500 aa17.2■□□□□ 0.34
SAMM50-201ENST00000350028 PRPF39Q86UA1 669 aaKnown RBP17.2■□□□□ 0.34
SAMM50-201ENST00000350028 LRRTM3Q86VH5 581 aa17.2■□□□□ 0.34
SAMM50-201ENST00000350028 OR10T2Q8NGX3 314 aa17.2■□□□□ 0.34
SAMM50-201ENST00000350028 GSDMBQ8TAX9 411 aa17.2■□□□□ 0.34
SAMM50-201ENST00000350028 HASPINQ8TF76 798 aa17.2■□□□□ 0.34
SAMM50-201ENST00000350028 EDEM1Q92611 657 aa17.2■□□□□ 0.34
SAMM50-201ENST00000350028 PITPNM3Q9BZ71 974 aa17.2■□□□□ 0.34
SAMM50-201ENST00000350028 IGSF9Q9P2J2 1179 aa17.2■□□□□ 0.34
SAMM50-201ENST00000350028 ARL2BPQ9Y2Y0 163 aa17.2■□□□□ 0.34
SAMM50-201ENST00000350028 PCDHA11Q9Y5I1 949 aa17.2■□□□□ 0.34
SAMM50-201ENST00000350028 COL4A4P53420 1690 aaPredicted RBP17.2■□□□□ 0.34
SAMM50-201ENST00000350028 FAM72CH0Y354 149 aa17.19■□□□□ 0.34
SAMM50-201ENST00000350028 PIAS1O75925 651 aa17.19■□□□□ 0.34
SAMM50-201ENST00000350028 CYP2C18P33260 490 aa17.19■□□□□ 0.34
SAMM50-201ENST00000350028 FAM189BP81408 668 aa17.19■□□□□ 0.34
SAMM50-201ENST00000350028 SLC18A2Q05940 514 aa17.19■□□□□ 0.34
SAMM50-201ENST00000350028 WASHC5Q12768 1159 aa17.19■□□□□ 0.34
SAMM50-201ENST00000350028 FAM72AQ5TYM5 149 aa17.19■□□□□ 0.34
SAMM50-201ENST00000350028 FAM72DQ6L9T8 149 aa17.19■□□□□ 0.34
SAMM50-201ENST00000350028 LVRNQ6Q4G3 990 aa17.19■□□□□ 0.34
SAMM50-201ENST00000350028 UNC5AQ6ZN44 842 aa17.19■□□□□ 0.34
SAMM50-201ENST00000350028 TRPM8Q7Z2W7 1104 aa17.19■□□□□ 0.34
SAMM50-201ENST00000350028 RTN4RL1Q86UN2 441 aaPredicted RBP17.19■□□□□ 0.34
SAMM50-201ENST00000350028 FAM72BQ86X60 149 aa17.19■□□□□ 0.34
SAMM50-201ENST00000350028 SPATA2LQ8IUW3 424 aaPredicted RBP17.19■□□□□ 0.34
SAMM50-201ENST00000350028 CCNJLQ8IV13 435 aa17.19■□□□□ 0.34
SAMM50-201ENST00000350028 CTAGE3PQ8IX95 158 aa17.19■□□□□ 0.34
SAMM50-201ENST00000350028 PPM1NQ8N819 430 aa17.19■□□□□ 0.34
SAMM50-201ENST00000350028 LRRC8CQ8TDW0 803 aa17.19■□□□□ 0.34
SAMM50-201ENST00000350028 EPAS1Q99814 870 aa17.19■□□□□ 0.34
SAMM50-201ENST00000350028 PLAC1Q9HBJ0 212 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms