RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 TNIP3Q96KP6 325 aa9.13□□□□□ -0.95
SNCA-201ENST00000336904 SIGLEC10Q96LC7 697 aa9.13□□□□□ -0.95
SNCA-201ENST00000336904 PPP1R36Q96LQ0 422 aa9.13□□□□□ -0.95
SNCA-201ENST00000336904 PPP1R10Q96QC0 940 aaKnown RBP9.13□□□□□ -0.95
SNCA-201ENST00000336904 LRRC37BQ96QE4 947 aa9.13□□□□□ -0.95
SNCA-201ENST00000336904 C11orf84Q9BUA3 381 aaPredicted RBP9.13□□□□□ -0.95
SNCA-201ENST00000336904 SHCBP1LQ9BZQ2 653 aa9.13□□□□□ -0.95
SNCA-201ENST00000336904 ATXN3LQ9H3M9 355 aa9.13□□□□□ -0.95
SNCA-201ENST00000336904 CAB39LQ9H9S4 337 aa9.13□□□□□ -0.95
SNCA-201ENST00000336904 RXFP1Q9HBX9 757 aa9.13□□□□□ -0.95
SNCA-201ENST00000336904 NOD2Q9HC29 1040 aa9.13□□□□□ -0.95
SNCA-201ENST00000336904 KLHL8Q9P2G9 620 aaPredicted RBP9.13□□□□□ -0.95
SNCA-201ENST00000336904 SFMBT1Q9UHJ3 866 aa9.13□□□□□ -0.95
SNCA-201ENST00000336904 SMG5Q9UPR3 1016 aaKnown RBP9.13□□□□□ -0.95
SNCA-201ENST00000336904 UNC80Q8N2C7 3258 aa9.13□□□□□ -0.95
SNCA-201ENST00000336904 C5orf42Q9H799 3197 aa9.12□□□□□ -0.95
SNCA-201ENST00000336904 B4GALT3O60512 393 aa9.12□□□□□ -0.95
SNCA-201ENST00000336904 SOAT2O75908 522 aa9.12□□□□□ -0.95
SNCA-201ENST00000336904 THP07101 528 aa9.12□□□□□ -0.95
SNCA-201ENST00000336904 DESP17661 470 aa9.12□□□□□ -0.95
SNCA-201ENST00000336904 ERCC2P18074 760 aa9.12□□□□□ -0.95
SNCA-201ENST00000336904 KCNA4P22459 653 aa9.12□□□□□ -0.95
SNCA-201ENST00000336904 SERPINB3P29508 390 aa9.12□□□□□ -0.95
SNCA-201ENST00000336904 CCND3P30281 292 aaPredicted RBP9.12□□□□□ -0.95
SNCA-201ENST00000336904 MRPS6P82932 125 aaKnown RBP9.12□□□□□ -0.95
SNCA-201ENST00000336904 BNIP1Q12981 228 aa9.12□□□□□ -0.95
SNCA-201ENST00000336904 XRCC4Q13426 336 aa9.12□□□□□ -0.95
SNCA-201ENST00000336904 STILQ15468 1287 aa9.12□□□□□ -0.95
SNCA-201ENST00000336904 DLG2Q15700 870 aa9.12□□□□□ -0.95
SNCA-201ENST00000336904 SLC25A52Q3SY17 297 aa9.12□□□□□ -0.95
SNCA-201ENST00000336904 ICE2Q659A1 982 aa9.12□□□□□ -0.95
SNCA-201ENST00000336904 LRRTM3Q86VH5 581 aa9.12□□□□□ -0.95
SNCA-201ENST00000336904 NT5DC4Q86YG4 428 aa9.12□□□□□ -0.95
SNCA-201ENST00000336904 CDKL3Q8IVW4 592 aaPredicted RBP9.12□□□□□ -0.95
SNCA-201ENST00000336904 ZNF276Q8N554 614 aa9.12□□□□□ -0.95
SNCA-201ENST00000336904 C10orf82Q8WW14 230 aa9.12□□□□□ -0.95
SNCA-201ENST00000336904 UTP4Q969X6 686 aaKnown RBP9.12□□□□□ -0.95
SNCA-201ENST00000336904 TSSK1BQ9BXA7 367 aa9.12□□□□□ -0.95
SNCA-201ENST00000336904 HCSTQ9UBK5 93 aa9.12□□□□□ -0.95
SNCA-201ENST00000336904 USP3Q9Y6I4 520 aa9.12□□□□□ -0.95
SNCA-201ENST00000336904 IQANK1A0A1B0GTG1 560 aa9.12□□□□□ -0.95
SNCA-201ENST00000336904 TTC24A2A3L6 582 aaPredicted RBP9.12□□□□□ -0.95
SNCA-201ENST00000336904 BCLAF3A2AJT9 711 aaKnown RBP9.12□□□□□ -0.95
SNCA-201ENST00000336904 M0QZ92 97 aa9.12□□□□□ -0.95
SNCA-201ENST00000336904 HAS3O00219 553 aa9.12□□□□□ -0.95
SNCA-201ENST00000336904 XPO1O14980 1071 aaKnown RBP9.12□□□□□ -0.95
SNCA-201ENST00000336904 DNAJC8O75937 253 aaPredicted RBP9.12□□□□□ -0.95
SNCA-201ENST00000336904 STAU1O95793 577 aaKnown RBP9.12□□□□□ -0.95
SNCA-201ENST00000336904 APOEP02649 317 aa9.12□□□□□ -0.95
SNCA-201ENST00000336904 PTPN9P43378 593 aa9.12□□□□□ -0.95
SNCA-201ENST00000336904 GTF2A1P52655 376 aaPredicted RBP9.12□□□□□ -0.95
SNCA-201ENST00000336904 RPL10AP62906 217 aaKnown RBP9.12□□□□□ -0.95
SNCA-201ENST00000336904 CHI3L2Q15782 390 aa9.12□□□□□ -0.95
SNCA-201ENST00000336904 AGAP11Q8TF27 550 aa9.12□□□□□ -0.95
SNCA-201ENST00000336904 MYLPFQ96A32 169 aa9.12□□□□□ -0.95
SNCA-201ENST00000336904 ZNF778Q96MU6 729 aa9.12□□□□□ -0.95
SNCA-201ENST00000336904 QKIQ96PU8 341 aaKnown RBP eCLIP9.12□□□□□ -0.95
SNCA-201ENST00000336904 AGAP2Q99490 1192 aa9.12□□□□□ -0.95
SNCA-201ENST00000336904 DHRS4Q9BTZ2 278 aa9.12□□□□□ -0.95
SNCA-201ENST00000336904 HEY2Q9UBP5 337 aa9.12□□□□□ -0.95
SNCA-201ENST00000336904 ACTL7BQ9Y614 415 aa9.12□□□□□ -0.95
SNCA-201ENST00000336904 SETSIPP0DME0 302 aa9.11□□□□□ -0.95
SNCA-201ENST00000336904 KCNE1P15382 129 aa9.11□□□□□ -0.95
SNCA-201ENST00000336904 PBX3P40426 434 aa9.11□□□□□ -0.95
SNCA-201ENST00000336904 SERPINB4P48594 390 aa9.11□□□□□ -0.95
SNCA-201ENST00000336904 GPR15P49685 360 aa9.11□□□□□ -0.95
SNCA-201ENST00000336904 FLT3LGP49771 235 aa9.11□□□□□ -0.95
SNCA-201ENST00000336904 SLC8A3P57103 927 aa9.11□□□□□ -0.95
SNCA-201ENST00000336904 TMPRSS15P98073 1019 aa9.11□□□□□ -0.95
SNCA-201ENST00000336904 PRKCZQ05513 592 aa9.11□□□□□ -0.95
SNCA-201ENST00000336904 ZBTB16Q05516 673 aa9.11□□□□□ -0.95
SNCA-201ENST00000336904 GALNTL6Q49A17 601 aa9.11□□□□□ -0.95
SNCA-201ENST00000336904 CERCAMQ5T4B2 595 aa9.11□□□□□ -0.95
SNCA-201ENST00000336904 SLC26A11Q86WA9 606 aa9.11□□□□□ -0.95
SNCA-201ENST00000336904 PLCD3Q8N3E9 789 aa9.11□□□□□ -0.95
SNCA-201ENST00000336904 DNAAF3Q8N9W5 541 aa9.11□□□□□ -0.95
SNCA-201ENST00000336904 ACVR1CQ8NER5 493 aa9.11□□□□□ -0.95
SNCA-201ENST00000336904 TEKT4Q8WW24 435 aa9.11□□□□□ -0.95
SNCA-201ENST00000336904 CENPIQ92674 756 aaPredicted RBP9.11□□□□□ -0.95
SNCA-201ENST00000336904 APOPT1Q96IL0 206 aa9.11□□□□□ -0.95
SNCA-201ENST00000336904 TKTL2Q9H0I9 626 aa9.11□□□□□ -0.95
SNCA-201ENST00000336904 GDAP2Q9NXN4 497 aa9.11□□□□□ -0.95
SNCA-201ENST00000336904 PADI3Q9ULW8 664 aa9.11□□□□□ -0.95
SNCA-201ENST00000336904 PRG3Q9Y2Y8 225 aaPredicted RBP9.11□□□□□ -0.95
SNCA-201ENST00000336904 DFFAO00273 331 aa9.11□□□□□ -0.95
SNCA-201ENST00000336904 ZBTB24O43167 697 aaPredicted RBP9.11□□□□□ -0.95
SNCA-201ENST00000336904 RFPL1O75677 317 aa9.11□□□□□ -0.95
SNCA-201ENST00000336904 ASGR1P07306 291 aa9.11□□□□□ -0.95
SNCA-201ENST00000336904 MYL2P10916 166 aa9.11□□□□□ -0.95
SNCA-201ENST00000336904 RGS2P41220 211 aa9.11□□□□□ -0.95
SNCA-201ENST00000336904 ARPP19P56211 112 aa9.11□□□□□ -0.95
SNCA-201ENST00000336904 TPI1P60174 286 aa9.11□□□□□ -0.95
SNCA-201ENST00000336904 WASHC5Q12768 1159 aa9.11□□□□□ -0.95
SNCA-201ENST00000336904 ZBTB17Q13105 803 aa9.11□□□□□ -0.95
SNCA-201ENST00000336904 RCN2Q14257 317 aa9.11□□□□□ -0.95
SNCA-201ENST00000336904 EFHC1Q5JVL4 640 aa9.11□□□□□ -0.95
SNCA-201ENST00000336904 CEP128Q6ZU80 1094 aa9.11□□□□□ -0.95
SNCA-201ENST00000336904 OTOP3Q7RTS5 596 aa9.11□□□□□ -0.95
SNCA-201ENST00000336904 IFNL1Q8IU54 200 aa9.11□□□□□ -0.95
SNCA-201ENST00000336904 ARID3BQ8IVW6 561 aaPredicted RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms