RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 STK39Q9UEW8 545 aa18.4■□□□□ 0.54
PRKCB-202ENST00000321728 DCDC2Q9UHG0 476 aa18.4■□□□□ 0.54
PRKCB-202ENST00000321728 F5H423 210 aaPredicted RBP18.39■□□□□ 0.54
PRKCB-202ENST00000321728 H3BSA7 217 aa18.39■□□□□ 0.54
PRKCB-202ENST00000321728 HNRNPCP07910 306 aaKnown RBP eCLIP18.39■□□□□ 0.545e-6■■■□□ 16.3
PRKCB-202ENST00000321728 SETSIPP0DME0 302 aa18.39■□□□□ 0.54
PRKCB-202ENST00000321728 SLC5A2P31639 672 aa18.39■□□□□ 0.54
PRKCB-202ENST00000321728 ATXN3P54252 364 aaPredicted RBP18.39■□□□□ 0.54
PRKCB-202ENST00000321728 CDH8P55286 799 aa18.39■□□□□ 0.54
PRKCB-202ENST00000321728 CNTN2Q02246 1040 aa18.39■□□□□ 0.54
PRKCB-202ENST00000321728 BAATQ14032 418 aaPredicted RBP18.39■□□□□ 0.54
PRKCB-202ENST00000321728 TSHZ1Q6ZSZ6 1077 aa18.39■□□□□ 0.54
PRKCB-202ENST00000321728 ZNF534Q76KX8 674 aa18.39■□□□□ 0.54
PRKCB-202ENST00000321728 VSIG10LQ86VR7 867 aa18.39■□□□□ 0.54
PRKCB-202ENST00000321728 SNRNP27Q8WVK2 155 aaKnown RBP18.39■□□□□ 0.54
PRKCB-202ENST00000321728 GPRASP2Q96D09 838 aa18.39■□□□□ 0.54
PRKCB-202ENST00000321728 RTP4Q96DX8 246 aa18.39■□□□□ 0.54
PRKCB-202ENST00000321728 LENG8Q96PV6 779 aaPredicted RBP18.39■□□□□ 0.54
PRKCB-202ENST00000321728 SERPINI1Q99574 410 aa18.39■□□□□ 0.54
PRKCB-202ENST00000321728 ZNF696Q9H7X3 374 aa18.39■□□□□ 0.54
PRKCB-202ENST00000321728 XPNPEP3Q9NQH7 507 aa18.39■□□□□ 0.54
PRKCB-202ENST00000321728 COL2A1P02458 1487 aaPredicted RBP18.39■□□□□ 0.53
PRKCB-202ENST00000321728 TRMUO75648 421 aaKnown RBP18.39■□□□□ 0.53
PRKCB-202ENST00000321728 GRAP2O75791 330 aa18.39■□□□□ 0.53
PRKCB-202ENST00000321728 ENDOD1O94919 500 aa18.39■□□□□ 0.53
PRKCB-202ENST00000321728 CBLBQ13191 982 aa18.39■□□□□ 0.53
PRKCB-202ENST00000321728 ACAP1Q15027 740 aa18.39■□□□□ 0.53
PRKCB-202ENST00000321728 PPM1JQ5JR12 505 aa18.39■□□□□ 0.53
PRKCB-202ENST00000321728 SUDS3Q9H7L9 328 aaPredicted RBP18.39■□□□□ 0.53
PRKCB-202ENST00000321728 ZNF510Q9Y2H8 683 aa18.39■□□□□ 0.53
PRKCB-202ENST00000321728 WDR27A2RRH5 827 aa18.38■□□□□ 0.53
PRKCB-202ENST00000321728 KRT19P08727 400 aa18.38■□□□□ 0.53
PRKCB-202ENST00000321728 PDGFRAP16234 1089 aa18.38■□□□□ 0.53
PRKCB-202ENST00000321728 GMPRP36959 345 aa18.38■□□□□ 0.53
PRKCB-202ENST00000321728 SERPINB8P50452 374 aa18.38■□□□□ 0.53
PRKCB-202ENST00000321728 ZNF143P52747 638 aaPredicted RBP18.38■□□□□ 0.53
PRKCB-202ENST00000321728 CRADDP78560 199 aa18.38■□□□□ 0.53
PRKCB-202ENST00000321728 ADGRE1Q14246 886 aa18.38■□□□□ 0.53
PRKCB-202ENST00000321728 CATSPER1Q8NEC5 780 aa18.38■□□□□ 0.53
PRKCB-202ENST00000321728 ACMSDQ8TDX5 336 aa18.38■□□□□ 0.53
PRKCB-202ENST00000321728 DDI1Q8WTU0 396 aa18.38■□□□□ 0.53
PRKCB-202ENST00000321728 SLC7A3Q8WY07 619 aa18.38■□□□□ 0.53
PRKCB-202ENST00000321728 TMEM216Q9P0N5 145 aa18.38■□□□□ 0.53
PRKCB-202ENST00000321728 BTBD7Q9P203 1132 aa18.38■□□□□ 0.53
PRKCB-202ENST00000321728 COPG2Q9UBF2 871 aa18.38■□□□□ 0.53
PRKCB-202ENST00000321728 GPD1P21695 349 aa18.38■□□□□ 0.53
PRKCB-202ENST00000321728 MAGEA6P43360 314 aa18.38■□□□□ 0.53
PRKCB-202ENST00000321728 NR1H2P55055 460 aa18.38■□□□□ 0.53
PRKCB-202ENST00000321728 PPIDQ08752 370 aaKnown RBP18.38■□□□□ 0.53
PRKCB-202ENST00000321728 SLC9B1Q4ZJI4 515 aa18.38■□□□□ 0.53
PRKCB-202ENST00000321728 AMIGO2Q86SJ2 522 aa18.38■□□□□ 0.53
PRKCB-202ENST00000321728 ZNF410Q86VK4 478 aa18.38■□□□□ 0.53
PRKCB-202ENST00000321728 RXFP2Q8WXD0 754 aa18.38■□□□□ 0.53
PRKCB-202ENST00000321728 CDRT15Q96T59 188 aa18.38■□□□□ 0.53
PRKCB-202ENST00000321728 OXCT2Q9BYC2 517 aaPredicted RBP18.38■□□□□ 0.53
PRKCB-202ENST00000321728 MOCS1Q9NZB8 636 aa18.38■□□□□ 0.53
PRKCB-202ENST00000321728 THEGQ9P2T0 379 aa18.38■□□□□ 0.53
PRKCB-202ENST00000321728 BCLAF3A2AJT9 711 aaKnown RBP18.37■□□□□ 0.53
PRKCB-202ENST00000321728 M0QYV0 167 aa18.37■□□□□ 0.53
PRKCB-202ENST00000321728 CFLARO15519 480 aa18.37■□□□□ 0.53
PRKCB-202ENST00000321728 ATP6V1G1O75348 118 aa18.37■□□□□ 0.53
PRKCB-202ENST00000321728 CD1EP15812 388 aa18.37■□□□□ 0.53
PRKCB-202ENST00000321728 ALOX15P16050 662 aaPredicted RBP18.37■□□□□ 0.53
PRKCB-202ENST00000321728 PRDX6P30041 224 aa18.37■□□□□ 0.53
PRKCB-202ENST00000321728 MAGEA3P43357 314 aa18.37■□□□□ 0.53
PRKCB-202ENST00000321728 PACS1Q6VY07 963 aa18.37■□□□□ 0.53
PRKCB-202ENST00000321728 CYP4V2Q6ZWL3 525 aaPredicted RBP18.37■□□□□ 0.53
PRKCB-202ENST00000321728 PQLC3Q8N755 202 aa18.37■□□□□ 0.53
PRKCB-202ENST00000321728 RNF148Q8N7C7 305 aa18.37■□□□□ 0.53
PRKCB-202ENST00000321728 IRGQQ8WZA9 623 aa18.37■□□□□ 0.53
PRKCB-202ENST00000321728 CDKL2Q92772 493 aa18.37■□□□□ 0.53
PRKCB-202ENST00000321728 PGBD4Q96DM1 585 aa18.37■□□□□ 0.53
PRKCB-202ENST00000321728 CNPY3Q9BT09 278 aa18.37■□□□□ 0.53
PRKCB-202ENST00000321728 PIH1D1Q9NWS0 290 aaKnown RBP18.37■□□□□ 0.53
PRKCB-202ENST00000321728 MAGEB3O15480 346 aa18.37■□□□□ 0.53
PRKCB-202ENST00000321728 HSPA4LO95757 839 aa18.37■□□□□ 0.53
PRKCB-202ENST00000321728 ASNSP08243 561 aa18.37■□□□□ 0.53
PRKCB-202ENST00000321728 THOP1P52888 689 aa18.37■□□□□ 0.53
PRKCB-202ENST00000321728 CYTH1Q15438 398 aa18.37■□□□□ 0.53
PRKCB-202ENST00000321728 PPP6R3Q5H9R7 873 aaPredicted RBP18.37■□□□□ 0.53
PRKCB-202ENST00000321728 ABHD15Q6UXT9 468 aa18.37■□□□□ 0.53
PRKCB-202ENST00000321728 ZNF781Q8N8C0 355 aa18.37■□□□□ 0.53
PRKCB-202ENST00000321728 MCRS1Q96EZ8 462 aa18.37■□□□□ 0.53
PRKCB-202ENST00000321728 ZNF668Q96K58 619 aaPredicted RBP18.37■□□□□ 0.53
PRKCB-202ENST00000321728 ZNF358Q9NW07 568 aa18.37■□□□□ 0.53
PRKCB-202ENST00000321728 CDY2AQ9Y6F7 541 aa18.37■□□□□ 0.53
PRKCB-202ENST00000321728 CDY1Q9Y6F8 540 aa18.37■□□□□ 0.53
PRKCB-202ENST00000321728 GOLGA8QA0A0J9YX86 632 aa18.36■□□□□ 0.53
PRKCB-202ENST00000321728 GOLGA8OA6NCC3 632 aa18.36■□□□□ 0.53
PRKCB-202ENST00000321728 GOLGA8NF8WBI6 632 aa18.36■□□□□ 0.53
PRKCB-202ENST00000321728 ADCY6O43306 1168 aa18.36■□□□□ 0.53
PRKCB-202ENST00000321728 XRCC1P18887 633 aaPredicted RBP18.36■□□□□ 0.53
PRKCB-202ENST00000321728 TGM2P21980 687 aa18.36■□□□□ 0.53
PRKCB-202ENST00000321728 IL4RP24394 825 aa18.36■□□□□ 0.53
PRKCB-202ENST00000321728 TYK2P29597 1187 aa18.36■□□□□ 0.53
PRKCB-202ENST00000321728 PKNOX1P55347 436 aa18.36■□□□□ 0.53
PRKCB-202ENST00000321728 OSTNP61366 133 aa18.36■□□□□ 0.53
PRKCB-202ENST00000321728 CDKL1Q00532 357 aa18.36■□□□□ 0.53
PRKCB-202ENST00000321728 PDK1Q15118 436 aa18.36■□□□□ 0.53
PRKCB-202ENST00000321728 SNX32Q86XE0 403 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms