RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 DNAJC1Q96KC8 554 aaKnown RBP16.04■□□□□ 0.16
SHROOM1-201ENST00000319854 MMADHCQ9H3L0 296 aaPredicted RBP16.04■□□□□ 0.16
SHROOM1-201ENST00000319854 STRNO43815 780 aa16.04■□□□□ 0.16
SHROOM1-201ENST00000319854 DNAJC6O75061 913 aa16.04■□□□□ 0.16
SHROOM1-201ENST00000319854 CTSHP09668 335 aa16.04■□□□□ 0.16
SHROOM1-201ENST00000319854 IL4RP24394 825 aa16.04■□□□□ 0.16
SHROOM1-201ENST00000319854 CRABP2P29373 138 aa16.04■□□□□ 0.16
SHROOM1-201ENST00000319854 RAP1GDS1P52306 607 aa16.04■□□□□ 0.16
SHROOM1-201ENST00000319854 HDAC4P56524 1084 aa16.04■□□□□ 0.16
SHROOM1-201ENST00000319854 PITX1P78337 314 aaPredicted RBP16.04■□□□□ 0.16
SHROOM1-201ENST00000319854 SLC6A3Q01959 620 aa16.04■□□□□ 0.16
SHROOM1-201ENST00000319854 TWF2Q6IBS0 349 aaKnown RBP16.04■□□□□ 0.16
SHROOM1-201ENST00000319854 NOTUMQ6P988 496 aa16.04■□□□□ 0.16
SHROOM1-201ENST00000319854 SATL1Q86VE3 508 aa16.04■□□□□ 0.16
SHROOM1-201ENST00000319854 PPM1NQ8N819 430 aa16.04■□□□□ 0.16
SHROOM1-201ENST00000319854 RNF169Q8NCN4 708 aa16.04■□□□□ 0.16
SHROOM1-201ENST00000319854 OXNAD1Q96HP4 312 aaPredicted RBP16.04■□□□□ 0.16
SHROOM1-201ENST00000319854 ADAMTS10Q9H324 1103 aa16.04■□□□□ 0.16
SHROOM1-201ENST00000319854 PCDH18Q9HCL0 1135 aa16.04■□□□□ 0.16
SHROOM1-201ENST00000319854 CLIC5Q9NZA1 410 aa16.04■□□□□ 0.16
SHROOM1-201ENST00000319854 FLRT1Q9NZU1 646 aa16.04■□□□□ 0.16
SHROOM1-201ENST00000319854 LRRC37A2A6NM11 1700 aa16.04■□□□□ 0.16
SHROOM1-201ENST00000319854 APOL1O14791 398 aa16.03■□□□□ 0.16
SHROOM1-201ENST00000319854 BUD23O43709 281 aaKnown RBP16.03■□□□□ 0.16
SHROOM1-201ENST00000319854 BGNP21810 368 aa16.03■□□□□ 0.16
SHROOM1-201ENST00000319854 YY1P25490 414 aa16.03■□□□□ 0.16
SHROOM1-201ENST00000319854 GABRB2P47870 512 aa16.03■□□□□ 0.16
SHROOM1-201ENST00000319854 CRADDP78560 199 aa16.03■□□□□ 0.16
SHROOM1-201ENST00000319854 RASA2Q15283 850 aa16.03■□□□□ 0.16
SHROOM1-201ENST00000319854 C9orf57Q5W0N0 161 aa16.03■□□□□ 0.16
SHROOM1-201ENST00000319854 RNF111Q6ZNA4 994 aa16.03■□□□□ 0.16
SHROOM1-201ENST00000319854 PRPF39Q86UA1 669 aaKnown RBP16.03■□□□□ 0.16
SHROOM1-201ENST00000319854 TLK2Q86UE8 772 aa16.03■□□□□ 0.16
SHROOM1-201ENST00000319854 MYLK4Q86YV6 388 aaPredicted RBP16.03■□□□□ 0.16
SHROOM1-201ENST00000319854 MAP7D3Q8IWC1 876 aa16.03■□□□□ 0.16
SHROOM1-201ENST00000319854 NAT14Q8WUY8 206 aa16.03■□□□□ 0.16
SHROOM1-201ENST00000319854 SNX27Q96L92 541 aa16.03■□□□□ 0.16
SHROOM1-201ENST00000319854 PHACTR1Q9C0D0 580 aa16.03■□□□□ 0.16
SHROOM1-201ENST00000319854 SNX25Q9H3E2 840 aa16.03■□□□□ 0.16
SHROOM1-201ENST00000319854 SEPT10Q9P0V9 454 aa16.03■□□□□ 0.16
SHROOM1-201ENST00000319854 ANGPTL2Q9UKU9 493 aa16.03■□□□□ 0.16
SHROOM1-201ENST00000319854 TRIP12Q14669 1992 aaPredicted RBP16.03■□□□□ 0.16
SHROOM1-201ENST00000319854 SMIM28A0A1B0GU29 152 aa16.03■□□□□ 0.16
SHROOM1-201ENST00000319854 PTPN7P35236 360 aa16.03■□□□□ 0.16
SHROOM1-201ENST00000319854 GRIA1P42261 906 aa16.03■□□□□ 0.16
SHROOM1-201ENST00000319854 DEUP1Q05D60 604 aa16.03■□□□□ 0.16
SHROOM1-201ENST00000319854 NME3Q13232 169 aa16.03■□□□□ 0.16
SHROOM1-201ENST00000319854 FBXO47Q5MNV8 452 aa16.03■□□□□ 0.16
SHROOM1-201ENST00000319854 CCDC185Q8N715 623 aa16.03■□□□□ 0.16
SHROOM1-201ENST00000319854 PQLC3Q8N755 202 aa16.03■□□□□ 0.16
SHROOM1-201ENST00000319854 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.03■□□□□ 0.16
SHROOM1-201ENST00000319854 ZNF513Q8N8E2 541 aaPredicted RBP16.03■□□□□ 0.16
SHROOM1-201ENST00000319854 BANPQ8N9N5 519 aa16.03■□□□□ 0.16
SHROOM1-201ENST00000319854 MZB1Q8WU39 189 aa16.03■□□□□ 0.16
SHROOM1-201ENST00000319854 KHSRPQ92945 711 aaKnown RBP eCLIP16.03■□□□□ 0.16
SHROOM1-201ENST00000319854 CENPKQ9BS16 269 aa16.03■□□□□ 0.16
SHROOM1-201ENST00000319854 THTPAQ9BU02 230 aa16.03■□□□□ 0.16
SHROOM1-201ENST00000319854 TUBB6Q9BUF5 446 aa16.03■□□□□ 0.16
SHROOM1-201ENST00000319854 SLC7A8Q9UHI5 535 aa16.03■□□□□ 0.16
SHROOM1-201ENST00000319854 COMMD3-BMI1R4GMX3 469 aa16.03■□□□□ 0.16
SHROOM1-201ENST00000319854 LOC285556D6RIA3 1793 aa16.03■□□□□ 0.16
SHROOM1-201ENST00000319854 GPR32O75388 356 aa16.03■□□□□ 0.16
SHROOM1-201ENST00000319854 PHBP35232 272 aa16.03■□□□□ 0.16
SHROOM1-201ENST00000319854 AFF1P51825 1210 aaKnown RBP16.03■□□□□ 0.16
SHROOM1-201ENST00000319854 KRT72Q14CN4 511 aa16.03■□□□□ 0.16
SHROOM1-201ENST00000319854 NOMO1Q15155 1222 aa16.03■□□□□ 0.16
SHROOM1-201ENST00000319854 ISLR2Q6UXK2 745 aa16.03■□□□□ 0.16
SHROOM1-201ENST00000319854 PCGF5Q86SE9 256 aa16.03■□□□□ 0.16
SHROOM1-201ENST00000319854 KPNA7A9QM74 516 aa16.02■□□□□ 0.16
SHROOM1-201ENST00000319854 OPHN1O60890 802 aa16.02■□□□□ 0.16
SHROOM1-201ENST00000319854 CYP2F1P24903 491 aa16.02■□□□□ 0.16
SHROOM1-201ENST00000319854 NDUFV1P49821 464 aa16.02■□□□□ 0.16
SHROOM1-201ENST00000319854 KDSRQ06136 332 aa16.02■□□□□ 0.16
SHROOM1-201ENST00000319854 TFDP2Q14188 446 aa16.02■□□□□ 0.16
SHROOM1-201ENST00000319854 PAN2Q504Q3 1202 aaKnown RBP16.02■□□□□ 0.16
SHROOM1-201ENST00000319854 SFT2D3Q587I9 215 aa16.02■□□□□ 0.16
SHROOM1-201ENST00000319854 DCAF6Q58WW2 860 aa16.02■□□□□ 0.16
SHROOM1-201ENST00000319854 SPATA24Q86W54 205 aa16.02■□□□□ 0.16
SHROOM1-201ENST00000319854 SCUBE1Q8IWY4 988 aa16.02■□□□□ 0.16
SHROOM1-201ENST00000319854 SLC35F5Q8WV83 523 aa16.02■□□□□ 0.16
SHROOM1-201ENST00000319854 HIC2Q96JB3 615 aa16.02■□□□□ 0.16
SHROOM1-201ENST00000319854 PGLYRP2Q96PD5 576 aa16.02■□□□□ 0.16
SHROOM1-201ENST00000319854 ZNF395Q9H8N7 513 aaPredicted RBP16.02■□□□□ 0.16
SHROOM1-201ENST00000319854 PLA2G4CQ9UP65 541 aa16.02■□□□□ 0.16
SHROOM1-201ENST00000319854 MTO1Q9Y2Z2 717 aaKnown RBP16.02■□□□□ 0.16
SHROOM1-201ENST00000319854 TCRBV9S1A1TA0A576 114 aa16.02■□□□□ 0.15
SHROOM1-201ENST00000319854 DCAF8L1A6NGE4 600 aa16.02■□□□□ 0.15
SHROOM1-201ENST00000319854 UGT1A9O60656 530 aa16.02■□□□□ 0.15
SHROOM1-201ENST00000319854 PENKP01210 267 aaPredicted RBP16.02■□□□□ 0.15
SHROOM1-201ENST00000319854 BMPR2Q13873 1038 aa16.02■□□□□ 0.15
SHROOM1-201ENST00000319854 EFHC2Q5JST6 749 aa16.02■□□□□ 0.15
SHROOM1-201ENST00000319854 CASC4Q6P4E1 433 aa16.02■□□□□ 0.15
SHROOM1-201ENST00000319854 ARRDC4Q8NCT1 418 aa16.02■□□□□ 0.15
SHROOM1-201ENST00000319854 VRTNQ9H8Y1 702 aa16.02■□□□□ 0.15
SHROOM1-201ENST00000319854 UGT1A7Q9HAW7 530 aa16.02■□□□□ 0.15
SHROOM1-201ENST00000319854 UGT1A10Q9HAW8 530 aa16.02■□□□□ 0.15
SHROOM1-201ENST00000319854 UGT1A8Q9HAW9 530 aa16.02■□□□□ 0.15
SHROOM1-201ENST00000319854 RHBDL2Q9NX52 303 aa16.02■□□□□ 0.15
SHROOM1-201ENST00000319854 NDE1Q9NXR1 346 aa16.02■□□□□ 0.15
SHROOM1-201ENST00000319854 DICER1Q9UPY3 1922 aaKnown RBP16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms